EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020020373 (Gene tree)
Gene ID: 112667145
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 11283 bases
Position: chrQKWQ01001279.1:847778-859060
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020025908	zf-U11-48K	PF05253.12	6e-20	1	2
ENSCAFP00020025908	zf-U11-48K	PF05253.12	6e-20	2	2
ENSCAFP00020025905	zf-U11-48K	PF05253.12	7.5e-20	1	2
ENSCAFP00020025905	zf-U11-48K	PF05253.12	7.5e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020029925	-	561	-	ENSCAFP00020025905	186 (aa)	-	-
ENSCAFT00020029929	-	525	-	ENSCAFP00020025908	174 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020020373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020020373's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020020373	-	100	91.477	ENSG00000170627	GTSF1	100	92.814	Homo_sapiens
ENSCAFG00020020373	-	84	45.638	ENSAPOG00000022724	-	95	45.638	Acanthochromis_polyacanthus
ENSCAFG00020020373	-	91	98.113	ENSAMEG00000000939	GTSF1	96	98.765	Ailuropoda_melanoleuca
ENSCAFG00020020373	-	84	44.295	ENSAOCG00000022214	-	72	43.312	Amphiprion_ocellaris
ENSCAFG00020020373	-	72	61.111	ENSAPLG00000004814	GTSF1	93	61.111	Anas_platyrhynchos
ENSCAFG00020020373	-	93	61.728	ENSACAG00000014260	-	94	62.112	Anolis_carolinensis
ENSCAFG00020020373	-	67	49.138	ENSACAG00000029590	-	95	49.138	Anolis_carolinensis
ENSCAFG00020020373	-	97	90.588	ENSANAG00000024529	GTSF1	100	92.216	Aotus_nancymaae
ENSCAFG00020020373	-	94	96.341	ENSBTAG00000018085	GTSF1	100	97.006	Bos_taurus
ENSCAFG00020020373	-	95	87.571	ENSCJAG00000039915	-	94	87.571	Callithrix_jacchus
ENSCAFG00020020373	-	94	92.073	ENSCJAG00000018968	-	100	92.814	Callithrix_jacchus
ENSCAFG00020020373	-	94	99.390	ENSCAFG00000006465	-	100	100.000	Canis_familiaris
ENSCAFG00020020373	-	92	95.000	ENSCHIG00000012215	-	95	95.706	Capra_hircus
ENSCAFG00020020373	-	94	76.220	ENSTSYG00000035266	-	100	76.647	Carlito_syrichta
ENSCAFG00020020373	-	94	94.512	ENSTSYG00000004679	-	100	95.181	Carlito_syrichta
ENSCAFG00020020373	-	94	96.341	ENSCPOG00000008743	GTSF1	100	97.006	Cavia_porcellus
ENSCAFG00020020373	-	97	68.235	ENSCCAG00000032808	GTSF1	100	68.323	Cebus_capucinus
ENSCAFG00020020373	-	94	92.073	ENSCATG00000036328	GTSF1	100	92.814	Cercocebus_atys
ENSCAFG00020020373	-	94	95.122	ENSCLAG00000012811	GTSF1	100	95.808	Chinchilla_lanigera
ENSCAFG00020020373	-	90	92.357	ENSCSAG00000005394	GTSF1	99	92.357	Chlorocebus_sabaeus
ENSCAFG00020020373	-	94	96.341	ENSCHOG00000001659	GTSF1	100	97.006	Choloepus_hoffmanni
ENSCAFG00020020373	-	90	59.236	ENSCPBG00000024905	-	86	60.000	Chrysemys_picta_bellii
ENSCAFG00020020373	-	94	71.515	ENSCPBG00000005134	-	77	68.362	Chrysemys_picta_bellii
ENSCAFG00020020373	-	94	86.585	ENSCANG00000031776	-	100	87.425	Colobus_angolensis_palliatus
ENSCAFG00020020373	-	94	90.854	ENSCANG00000033118	GTSF1	100	91.617	Colobus_angolensis_palliatus
ENSCAFG00020020373	-	94	96.951	ENSCGRG00001013814	Gtsf1	100	97.605	Cricetulus_griseus_chok1gshd
ENSCAFG00020020373	-	94	96.951	ENSCGRG00000007733	Gtsf1	100	97.605	Cricetulus_griseus_crigri
ENSCAFG00020020373	-	90	96.178	ENSDNOG00000001438	-	90	96.178	Dasypus_novemcinctus
ENSCAFG00020020373	-	94	96.951	ENSDORG00000003228	Gtsf1	100	97.605	Dipodomys_ordii
ENSCAFG00020020373	-	94	95.732	ENSETEG00000009310	GTSF1	100	96.407	Echinops_telfairi
ENSCAFG00020020373	-	99	94.022	ENSEASG00005010260	GTSF1	99	94.022	Equus_asinus_asinus
ENSCAFG00020020373	-	94	96.951	ENSECAG00000013618	GTSF1	100	97.605	Equus_caballus
ENSCAFG00020020373	-	94	98.171	ENSEEUG00000005185	GTSF1	100	98.802	Erinaceus_europaeus
ENSCAFG00020020373	-	99	66.286	ENSFCAG00000023672	-	95	70.056	Felis_catus
ENSCAFG00020020373	-	94	98.780	ENSFCAG00000010156	-	100	99.401	Felis_catus
ENSCAFG00020020373	-	72	53.968	ENSFALG00000007613	-	100	53.968	Ficedula_albicollis
ENSCAFG00020020373	-	94	90.854	ENSFDAG00000009383	GTSF1	100	91.617	Fukomys_damarensis
ENSCAFG00020020373	-	92	55.280	ENSGALG00000001109	GTSF1	99	55.280	Gallus_gallus
ENSCAFG00020020373	-	84	49.660	ENSGACG00000010783	-	80	49.660	Gasterosteus_aculeatus
ENSCAFG00020020373	-	60	51.887	ENSGAGG00000016342	-	99	51.887	Gopherus_agassizii
ENSCAFG00020020373	-	100	62.500	ENSGAGG00000011062	GTSF1	91	62.500	Gopherus_agassizii
ENSCAFG00020020373	-	64	45.045	ENSGAGG00000018216	-	89	45.045	Gopherus_agassizii
ENSCAFG00020020373	-	94	92.073	ENSGGOG00000016063	GTSF1	100	92.814	Gorilla_gorilla
ENSCAFG00020020373	-	94	93.293	ENSHGLG00000002436	GTSF1	100	94.012	Heterocephalus_glaber_female
ENSCAFG00020020373	-	94	93.293	ENSHGLG00100017301	GTSF1	100	94.012	Heterocephalus_glaber_male
ENSCAFG00020020373	-	90	47.799	ENSIPUG00000002483	-	84	47.799	Ictalurus_punctatus
ENSCAFG00020020373	-	96	96.629	ENSSTOG00000025170	GTSF1	100	98.204	Ictidomys_tridecemlineatus
ENSCAFG00020020373	-	94	92.073	ENSJJAG00000003323	-	100	92.216	Jaculus_jaculus
ENSCAFG00020020373	-	94	85.976	ENSJJAG00000017442	-	100	86.228	Jaculus_jaculus
ENSCAFG00020020373	-	84	48.980	ENSKMAG00000006038	-	80	48.980	Kryptolebias_marmoratus
ENSCAFG00020020373	-	89	61.688	ENSLACG00000008870	GTSF1	82	61.392	Latimeria_chalumnae
ENSCAFG00020020373	-	91	98.113	ENSLAFG00000016318	GTSF1	97	98.765	Loxodonta_africana
ENSCAFG00020020373	-	94	92.073	ENSMFAG00000041178	GTSF1	100	92.814	Macaca_fascicularis
ENSCAFG00020020373	-	100	91.477	ENSMMUG00000003758	GTSF1	100	92.814	Macaca_mulatta
ENSCAFG00020020373	-	94	92.073	ENSMNEG00000036779	GTSF1	100	92.814	Macaca_nemestrina
ENSCAFG00020020373	-	94	91.463	ENSMLEG00000028375	GTSF1	100	92.216	Mandrillus_leucophaeus
ENSCAFG00020020373	-	76	56.716	ENSMGAG00000000685	GTSF1	95	56.716	Meleagris_gallopavo
ENSCAFG00020020373	-	94	71.951	ENSMAUG00000018746	Gtsf1	99	73.054	Mesocricetus_auratus
ENSCAFG00020020373	-	94	98.171	ENSMICG00000008444	-	100	98.802	Microcebus_murinus
ENSCAFG00020020373	-	94	96.341	ENSMOCG00000018889	Gtsf1	100	97.006	Microtus_ochrogaster
ENSCAFG00020020373	-	94	87.195	ENSMODG00000019422	GTSF1	100	88.024	Monodelphis_domestica
ENSCAFG00020020373	-	94	96.341	MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	Mus_caroli
ENSCAFG00020020373	-	94	96.341	ENSMUSG00000022487	Gtsf1	100	97.638	Mus_musculus
ENSCAFG00020020373	-	94	95.732	MGP_PahariEiJ_G0020378	Gtsf1	100	96.850	Mus_pahari
ENSCAFG00020020373	-	94	96.341	MGP_SPRETEiJ_G0021272	Gtsf1	100	97.638	Mus_spretus
ENSCAFG00020020373	-	94	96.951	ENSMPUG00000019323	-	100	97.605	Mustela_putorius_furo
ENSCAFG00020020373	-	94	89.024	ENSMPUG00000019140	-	100	89.820	Mustela_putorius_furo
ENSCAFG00020020373	-	93	98.137	ENSMPUG00000005669	-	98	98.780	Mustela_putorius_furo
ENSCAFG00020020373	-	94	93.293	ENSMLUG00000026557	-	100	94.012	Myotis_lucifugus
ENSCAFG00020020373	-	94	96.341	ENSMLUG00000012961	-	100	97.006	Myotis_lucifugus
ENSCAFG00020020373	-	94	95.732	ENSNGAG00000014213	Gtsf1	100	96.407	Nannospalax_galili
ENSCAFG00020020373	-	94	91.463	ENSNLEG00000017635	GTSF1	100	92.216	Nomascus_leucogenys
ENSCAFG00020020373	-	94	77.439	ENSMEUG00000016206	GTSF1	100	77.844	Notamacropus_eugenii
ENSCAFG00020020373	-	94	68.293	ENSOPRG00000017277	GTSF1	100	69.461	Ochotona_princeps
ENSCAFG00020020373	-	94	95.732	ENSODEG00000014220	GTSF1	100	96.407	Octodon_degus
ENSCAFG00020020373	-	91	70.440	ENSOANG00000011386	GTSF1	99	69.091	Ornithorhynchus_anatinus
ENSCAFG00020020373	-	94	96.341	ENSOCUG00000024495	GTSF1	100	97.006	Oryctolagus_cuniculus
ENSCAFG00020020373	-	65	51.327	ENSORLG00015005017	-	70	51.327	Oryzias_latipes_hsok
ENSCAFG00020020373	-	97	93.529	ENSOGAG00000017227	GTSF1	100	93.529	Otolemur_garnettii
ENSCAFG00020020373	-	94	96.951	ENSOARG00000016162	GTSF1	100	97.605	Ovis_aries
ENSCAFG00020020373	-	94	92.073	ENSPPAG00000028506	GTSF1	100	92.814	Pan_paniscus
ENSCAFG00020020373	-	94	98.171	ENSPPRG00000004344	-	100	98.802	Panthera_pardus
ENSCAFG00020020373	-	99	84.571	ENSPPRG00000017612	-	96	88.136	Panthera_pardus
ENSCAFG00020020373	-	94	98.171	ENSPTIG00000020415	-	100	98.802	Panthera_tigris_altaica
ENSCAFG00020020373	-	99	85.143	ENSPTIG00000010868	-	96	88.701	Panthera_tigris_altaica
ENSCAFG00020020373	-	100	91.477	ENSPTRG00000005041	GTSF1	100	92.814	Pan_troglodytes
ENSCAFG00020020373	-	94	92.073	ENSPANG00000020579	GTSF1	100	92.814	Papio_anubis
ENSCAFG00020020373	-	94	69.091	ENSPSIG00000009968	GTSF1	85	67.630	Pelodiscus_sinensis
ENSCAFG00020020373	-	80	44.966	ENSPSIG00000009839	-	93	44.966	Pelodiscus_sinensis
ENSCAFG00020020373	-	94	96.951	ENSPEMG00000009595	Gtsf1	100	97.605	Peromyscus_maniculatus_bairdii
ENSCAFG00020020373	-	94	83.537	ENSPCIG00000006731	GTSF1	100	84.431	Phascolarctos_cinereus
ENSCAFG00020020373	-	94	92.073	ENSPPYG00000004605	GTSF1	100	92.814	Pongo_abelii
ENSCAFG00020020373	-	93	83.735	ENSPCOG00000015201	-	99	82.716	Propithecus_coquereli
ENSCAFG00020020373	-	94	98.780	ENSPCOG00000016907	-	100	99.401	Propithecus_coquereli
ENSCAFG00020020373	-	94	98.171	ENSPVAG00000000333	GTSF1	100	98.802	Pteropus_vampyrus
ENSCAFG00020020373	-	86	48.026	ENSPNAG00000005737	-	82	48.026	Pygocentrus_nattereri
ENSCAFG00020020373	-	94	96.341	ENSRNOG00000036831	Gtsf1	94	93.785	Rattus_norvegicus
ENSCAFG00020020373	-	96	84.358	ENSRBIG00000039916	-	95	84.358	Rhinopithecus_bieti
ENSCAFG00020020373	-	94	91.463	ENSRBIG00000043438	-	100	92.216	Rhinopithecus_bieti
ENSCAFG00020020373	-	94	92.073	ENSRROG00000008137	GTSF1	100	92.814	Rhinopithecus_roxellana
ENSCAFG00020020373	-	94	92.683	ENSSBOG00000029460	GTSF1	100	93.413	Saimiri_boliviensis_boliviensis
ENSCAFG00020020373	-	94	87.195	ENSSHAG00000011633	GTSF1	100	88.024	Sarcophilus_harrisii
ENSCAFG00020020373	-	75	99.231	ENSSARG00000004928	GTSF1	78	99.231	Sorex_araneus
ENSCAFG00020020373	-	94	51.534	ENSSPUG00000010064	GTSF1	93	71.818	Sphenodon_punctatus
ENSCAFG00020020373	-	94	97.561	ENSSSCG00000026333	GTSF1	100	98.204	Sus_scrofa
ENSCAFG00020020373	-	73	56.250	ENSTGUG00000002008	-	100	56.250	Taeniopygia_guttata
ENSCAFG00020020373	-	91	95.570	ENSTBEG00000006154	GTSF1	100	96.273	Tupaia_belangeri
ENSCAFG00020020373	-	94	95.122	ENSTTRG00000004470	GTSF1	100	95.808	Tursiops_truncatus
ENSCAFG00020020373	-	100	98.276	ENSUAMG00000021669	GTSF1	100	98.276	Ursus_americanus
ENSCAFG00020020373	-	94	98.780	ENSUMAG00000011279	GTSF1	100	99.401	Ursus_maritimus
ENSCAFG00020020373	-	94	96.951	ENSVPAG00000007016	GTSF1	100	97.605	Vicugna_pacos
ENSCAFG00020020373	-	96	99.438	ENSVVUG00000023687	-	90	99.438	Vulpes_vulpes
ENSCAFG00020020373	-	93	63.975	ENSXETG00000033546	gtsf1	71	63.975	Xenopus_tropicalis