EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020020790 (Gene tree)
Gene ID: 112641320
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 12456 bases
Position: chrQKWQ01001619.1:1250362-1262817
Accession: 112641320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020026455	tRNA-synt_1g	PF09334.11	5.6e-11	1	1
ENSCAFP00020026455	Anticodon_1	PF08264.13	6.6e-34	1	1
ENSCAFP00020026455	tRNA-synt_1	PF00133.22	7.7e-202	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020030561	VARS-201	3890	XM_025418233	ENSCAFP00020026455	1233 (aa)	XP_025274018	-

Gene Model

Click here to download ENSCAFG00020020790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020020790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020020790	VARS	74	52.079	ENSCAFG00020019387	VARS2	88	53.256

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020020790	VARS	96	94.341	ENSG00000204394	VARS	100	96.552	Homo_sapiens
ENSCAFG00020020790	VARS	96	65.757	ENSAPOG00000020921	vars	96	65.781	Acanthochromis_polyacanthus
ENSCAFG00020020790	VARS	96	65.757	ENSAPOG00000020691	vars	96	65.781	Acanthochromis_polyacanthus
ENSCAFG00020020790	VARS	96	96.287	ENSAMEG00000006417	VARS	94	96.287	Ailuropoda_melanoleuca
ENSCAFG00020020790	VARS	96	66.639	ENSACIG00000013752	vars	94	66.583	Amphilophus_citrinellus
ENSCAFG00020020790	VARS	96	65.757	ENSAOCG00000002447	vars	93	65.781	Amphiprion_ocellaris
ENSCAFG00020020790	VARS	96	65.591	ENSAPEG00000010638	vars	93	65.615	Amphiprion_percula
ENSCAFG00020020790	VARS	96	64.770	ENSATEG00000020219	vars	94	65.601	Anabas_testudineus
ENSCAFG00020020790	VARS	92	70.859	ENSACAG00000029133	-	99	70.598	Anolis_carolinensis
ENSCAFG00020020790	VARS	96	94.510	ENSANAG00000015453	VARS	94	94.510	Aotus_nancymaae
ENSCAFG00020020790	VARS	96	65.842	ENSACLG00000025699	vars	91	65.783	Astatotilapia_calliptera
ENSCAFG00020020790	VARS	96	66.163	ENSAMXG00000017716	vars	94	66.163	Astyanax_mexicanus
ENSCAFG00020020790	VARS	96	94.764	ENSBTAG00000005631	VARS	94	94.764	Bos_taurus
ENSCAFG00020020790	VARS	96	94.257	ENSCJAG00000002604	VARS	94	94.257	Callithrix_jacchus
ENSCAFG00020020790	VARS	96	99.831	ENSCAFG00000000636	VARS	94	99.831	Canis_familiaris
ENSCAFG00020020790	VARS	96	94.932	ENSCHIG00000011008	VARS	94	94.932	Capra_hircus
ENSCAFG00020020790	VARS	96	94.764	ENSTSYG00000001567	VARS	94	94.764	Carlito_syrichta
ENSCAFG00020020790	VARS	87	90.242	ENSCAPG00000013736	VARS	93	90.242	Cavia_aperea
ENSCAFG00020020790	VARS	96	90.963	ENSCPOG00000000870	VARS	94	90.963	Cavia_porcellus
ENSCAFG00020020790	VARS	96	94.341	ENSCCAG00000035656	VARS	94	94.341	Cebus_capucinus
ENSCAFG00020020790	VARS	96	94.426	ENSCATG00000022394	VARS	94	94.426	Cercocebus_atys
ENSCAFG00020020790	VARS	86	89.114	ENSCLAG00000009470	VARS	87	89.114	Chinchilla_lanigera
ENSCAFG00020020790	VARS	96	94.426	ENSCSAG00000008784	VARS	94	94.426	Chlorocebus_sabaeus
ENSCAFG00020020790	VARS	73	76.063	ENSCPBG00000007943	VARS	88	76.063	Chrysemys_picta_bellii
ENSCAFG00020020790	VARS	96	94.341	ENSCANG00000033570	VARS	94	94.341	Colobus_angolensis_palliatus
ENSCAFG00020020790	VARS	96	92.483	ENSCGRG00001005686	Vars	94	92.483	Cricetulus_griseus_chok1gshd
ENSCAFG00020020790	VARS	88	87.253	ENSCGRG00000013352	Vars	73	87.253	Cricetulus_griseus_crigri
ENSCAFG00020020790	VARS	96	64.962	ENSCSEG00000019652	vars	93	65.046	Cynoglossus_semilaevis
ENSCAFG00020020790	VARS	96	65.949	ENSCVAG00000022398	vars	94	65.949	Cyprinodon_variegatus
ENSCAFG00020020790	VARS	96	65.483	ENSDARG00000044575	vars	94	65.480	Danio_rerio
ENSCAFG00020020790	VARS	80	92.167	ENSDORG00000016433	Vars	88	92.167	Dipodomys_ordii
ENSCAFG00020020790	VARS	64	86.111	ENSETEG00000003824	VARS	70	86.747	Echinops_telfairi
ENSCAFG00020020790	VARS	52	64.198	ENSEBUG00000004637	vars	89	64.506	Eptatretus_burgeri
ENSCAFG00020020790	VARS	98	93.982	ENSEASG00005015673	VARS	94	95.608	Equus_asinus_asinus
ENSCAFG00020020790	VARS	98	93.081	ENSECAG00000014620	VARS	94	95.105	Equus_caballus
ENSCAFG00020020790	VARS	79	93.780	ENSEEUG00000004116	VARS	76	93.780	Erinaceus_europaeus
ENSCAFG00020020790	VARS	96	65.078	ENSELUG00000006550	vars	91	65.160	Esox_lucius
ENSCAFG00020020790	VARS	98	94.394	ENSFCAG00000004510	VARS	94	96.030	Felis_catus
ENSCAFG00020020790	VARS	79	91.340	ENSFDAG00000011401	VARS	94	91.340	Fukomys_damarensis
ENSCAFG00020020790	VARS	96	66.172	ENSFHEG00000010672	vars	94	66.280	Fundulus_heteroclitus
ENSCAFG00020020790	VARS	88	67.201	ENSGMOG00000014908	vars	91	67.201	Gadus_morhua
ENSCAFG00020020790	VARS	96	66.390	ENSGAFG00000021630	vars	94	66.390	Gambusia_affinis
ENSCAFG00020020790	VARS	88	67.950	ENSGACG00000009601	vars	91	67.500	Gasterosteus_aculeatus
ENSCAFG00020020790	VARS	51	65.403	ENSGAGG00000006508	-	91	64.929	Gopherus_agassizii
ENSCAFG00020020790	VARS	96	94.257	ENSGGOG00000011364	VARS	94	94.257	Gorilla_gorilla
ENSCAFG00020020790	VARS	96	65.842	ENSHBUG00000017151	vars	91	65.783	Haplochromis_burtoni
ENSCAFG00020020790	VARS	96	90.625	ENSHGLG00000011646	VARS	94	90.456	Heterocephalus_glaber_female
ENSCAFG00020020790	VARS	89	83.096	ENSHGLG00100018062	VARS	93	83.096	Heterocephalus_glaber_male
ENSCAFG00020020790	VARS	96	65.731	ENSHCOG00000012198	vars	94	65.672	Hippocampus_comes
ENSCAFG00020020790	VARS	96	66.473	ENSIPUG00000005218	vars	94	66.473	Ictalurus_punctatus
ENSCAFG00020020790	VARS	96	93.840	ENSSTOG00000013112	VARS	94	93.840	Ictidomys_tridecemlineatus
ENSCAFG00020020790	VARS	96	91.470	ENSJJAG00000019749	-	94	90.963	Jaculus_jaculus
ENSCAFG00020020790	VARS	96	72.504	ENSJJAG00000015343	-	94	73.648	Jaculus_jaculus
ENSCAFG00020020790	VARS	96	65.633	ENSKMAG00000009455	vars	94	65.633	Kryptolebias_marmoratus
ENSCAFG00020020790	VARS	96	64.388	ENSLBEG00000010341	vars	93	65.093	Labrus_bergylta
ENSCAFG00020020790	VARS	96	62.035	ENSLACG00000015232	VARS	98	62.366	Latimeria_chalumnae
ENSCAFG00020020790	VARS	96	67.586	ENSLOCG00000004240	vars	94	67.669	Lepisosteus_oculatus
ENSCAFG00020020790	VARS	96	93.581	ENSLAFG00000023090	VARS	94	93.328	Loxodonta_africana
ENSCAFG00020020790	VARS	96	94.510	ENSMFAG00000001032	VARS	94	94.510	Macaca_fascicularis
ENSCAFG00020020790	VARS	96	94.510	ENSMMUG00000006828	VARS	94	94.510	Macaca_mulatta
ENSCAFG00020020790	VARS	96	94.595	ENSMNEG00000042072	VARS	94	94.595	Macaca_nemestrina
ENSCAFG00020020790	VARS	96	94.510	ENSMLEG00000039307	VARS	94	94.510	Mandrillus_leucophaeus
ENSCAFG00020020790	VARS	96	65.509	ENSMAMG00000003949	vars	94	65.615	Mastacembelus_armatus
ENSCAFG00020020790	VARS	96	65.842	ENSMZEG00005018327	vars	93	65.543	Maylandia_zebra
ENSCAFG00020020790	VARS	96	92.061	ENSMAUG00000006715	Vars	94	92.061	Mesocricetus_auratus
ENSCAFG00020020790	VARS	98	91.344	ENSMICG00000003548	VARS	94	92.905	Microcebus_murinus
ENSCAFG00020020790	VARS	96	88.936	ENSMOCG00000015404	Vars	94	88.767	Microtus_ochrogaster
ENSCAFG00020020790	VARS	96	65.327	ENSMMOG00000015801	vars	93	65.159	Mola_mola
ENSCAFG00020020790	VARS	96	86.402	ENSMODG00000015204	-	94	86.402	Monodelphis_domestica
ENSCAFG00020020790	VARS	96	65.798	ENSMALG00000022532	vars	94	65.591	Monopterus_albus
ENSCAFG00020020790	VARS	96	92.736	MGP_CAROLIEiJ_G0021491	Vars	94	92.568	Mus_caroli
ENSCAFG00020020790	VARS	96	92.736	ENSMUSG00000007029	Vars	94	92.568	Mus_musculus
ENSCAFG00020020790	VARS	96	92.230	MGP_PahariEiJ_G0020486	Vars	94	92.145	Mus_pahari
ENSCAFG00020020790	VARS	96	92.821	MGP_SPRETEiJ_G0022396	Vars	94	92.652	Mus_spretus
ENSCAFG00020020790	VARS	96	96.453	ENSMPUG00000010821	VARS	94	96.453	Mustela_putorius_furo
ENSCAFG00020020790	VARS	80	93.016	ENSMLUG00000013126	VARS	100	93.522	Myotis_lucifugus
ENSCAFG00020020790	VARS	99	89.714	ENSNGAG00000012151	Vars	94	92.230	Nannospalax_galili
ENSCAFG00020020790	VARS	96	65.594	ENSNBRG00000020520	vars	94	65.534	Neolamprologus_brichardi
ENSCAFG00020020790	VARS	96	93.750	ENSNLEG00000006351	VARS	94	93.750	Nomascus_leucogenys
ENSCAFG00020020790	VARS	96	82.770	ENSMEUG00000011378	VARS	94	82.770	Notamacropus_eugenii
ENSCAFG00020020790	VARS	96	92.736	ENSOPRG00000003607	VARS	94	92.736	Ochotona_princeps
ENSCAFG00020020790	VARS	96	90.878	ENSODEG00000017681	VARS	94	90.541	Octodon_degus
ENSCAFG00020020790	VARS	96	66.195	ENSONIG00000013064	vars	93	69.439	Oreochromis_niloticus
ENSCAFG00020020790	VARS	79	78.597	ENSOANG00000005400	VARS	98	77.883	Ornithorhynchus_anatinus
ENSCAFG00020020790	VARS	98	89.218	ENSOCUG00000022463	VARS	94	90.978	Oryctolagus_cuniculus
ENSCAFG00020020790	VARS	96	65.768	ENSORLG00000013063	vars	94	65.710	Oryzias_latipes
ENSCAFG00020020790	VARS	96	66.198	ENSORLG00020003504	vars	94	66.281	Oryzias_latipes_hni
ENSCAFG00020020790	VARS	96	66.172	ENSORLG00015009001	vars	94	66.172	Oryzias_latipes_hsok
ENSCAFG00020020790	VARS	96	66.005	ENSOMEG00000015016	vars	94	66.005	Oryzias_melastigma
ENSCAFG00020020790	VARS	98	91.591	ENSOGAG00000007515	VARS	94	93.159	Otolemur_garnettii
ENSCAFG00020020790	VARS	50	91.396	ENSOARG00000004625	-	91	90.705	Ovis_aries
ENSCAFG00020020790	VARS	96	94.510	ENSPPAG00000034012	VARS	94	94.510	Pan_paniscus
ENSCAFG00020020790	VARS	98	94.641	ENSPPRG00000014855	VARS	94	96.284	Panthera_pardus
ENSCAFG00020020790	VARS	87	96.190	ENSPTIG00000010462	VARS	95	96.154	Panthera_tigris_altaica
ENSCAFG00020020790	VARS	96	94.510	ENSPTRG00000017985	VARS	94	94.510	Pan_troglodytes
ENSCAFG00020020790	VARS	96	92.677	ENSPANG00000014565	VARS	94	92.677	Papio_anubis
ENSCAFG00020020790	VARS	96	64.885	ENSPKIG00000016304	vars	94	64.885	Paramormyrops_kingsleyae
ENSCAFG00020020790	VARS	96	66.863	ENSPMGG00000023909	vars	94	66.947	Periophthalmus_magnuspinnatus
ENSCAFG00020020790	VARS	96	93.074	ENSPEMG00000006639	Vars	94	93.074	Peromyscus_maniculatus_bairdii
ENSCAFG00020020790	VARS	96	85.811	ENSPCIG00000018553	VARS	94	85.811	Phascolarctos_cinereus
ENSCAFG00020020790	VARS	96	66.556	ENSPFOG00000015690	vars	94	66.556	Poecilia_formosa
ENSCAFG00020020790	VARS	96	67.338	ENSPLAG00000009590	vars	94	67.003	Poecilia_latipinna
ENSCAFG00020020790	VARS	96	66.556	ENSPMEG00000004708	vars	94	66.556	Poecilia_mexicana
ENSCAFG00020020790	VARS	96	65.042	ENSPREG00000013264	vars	93	64.958	Poecilia_reticulata
ENSCAFG00020020790	VARS	96	92.483	ENSPPYG00000016460	VARS	94	92.483	Pongo_abelii
ENSCAFG00020020790	VARS	81	94.130	ENSPCAG00000013565	VARS	79	94.130	Procavia_capensis
ENSCAFG00020020790	VARS	98	91.928	ENSPCOG00000010942	VARS	94	93.924	Propithecus_coquereli
ENSCAFG00020020790	VARS	98	89.695	ENSPVAG00000012403	VARS	94	91.216	Pteropus_vampyrus
ENSCAFG00020020790	VARS	96	65.842	ENSPNYG00000022511	vars	94	65.783	Pundamilia_nyererei
ENSCAFG00020020790	VARS	96	66.061	ENSPNAG00000020962	vars	94	66.088	Pygocentrus_nattereri
ENSCAFG00020020790	VARS	96	93.243	ENSRNOG00000000867	Vars	94	93.243	Rattus_norvegicus
ENSCAFG00020020790	VARS	96	94.510	ENSRBIG00000041669	VARS	94	94.510	Rhinopithecus_bieti
ENSCAFG00020020790	VARS	96	94.510	ENSRROG00000045490	VARS	94	94.510	Rhinopithecus_roxellana
ENSCAFG00020020790	VARS	96	93.919	ENSSBOG00000035402	VARS	94	93.919	Saimiri_boliviensis_boliviensis
ENSCAFG00020020790	VARS	96	81.727	ENSSHAG00000006937	VARS	94	81.978	Sarcophilus_harrisii
ENSCAFG00020020790	VARS	96	65.404	ENSSFOG00015014272	vars	94	65.321	Scleropages_formosus
ENSCAFG00020020790	VARS	96	64.545	ENSSMAG00000009596	vars	93	64.599	Scophthalmus_maximus
ENSCAFG00020020790	VARS	96	65.486	ENSSDUG00000014177	vars	94	65.591	Seriola_dumerili
ENSCAFG00020020790	VARS	96	65.568	ENSSLDG00000025316	vars	94	65.674	Seriola_lalandi_dorsalis
ENSCAFG00020020790	VARS	96	65.866	ENSSPAG00000017068	vars	94	65.947	Stegastes_partitus
ENSCAFG00020020790	VARS	96	93.249	ENSSSCG00000038950	VARS	94	93.671	Sus_scrofa
ENSCAFG00020020790	VARS	83	64.563	ENSTRUG00000012307	vars	96	64.410	Takifugu_rubripes
ENSCAFG00020020790	VARS	96	66.027	ENSTNIG00000008011	vars	94	65.941	Tetraodon_nigroviridis
ENSCAFG00020020790	VARS	55	95.506	ENSTBEG00000004728	-	60	95.506	Tupaia_belangeri
ENSCAFG00020020790	VARS	96	86.064	ENSTTRG00000014128	VARS	94	86.064	Tursiops_truncatus
ENSCAFG00020020790	VARS	96	91.946	ENSUAMG00000010424	VARS	94	91.946	Ursus_americanus
ENSCAFG00020020790	VARS	86	96.110	ENSUMAG00000013486	VARS	92	96.110	Ursus_maritimus
ENSCAFG00020020790	VARS	96	99.325	ENSVVUG00000021323	VARS	94	99.325	Vulpes_vulpes
ENSCAFG00020020790	VARS	92	64.218	ENSXETG00000024076	vars	91	63.581	Xenopus_tropicalis
ENSCAFG00020020790	VARS	96	66.471	ENSXCOG00000019172	vars	94	66.471	Xiphophorus_couchianus
ENSCAFG00020020790	VARS	96	66.639	ENSXMAG00000010927	vars	94	66.639	Xiphophorus_maculatus