EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020020821 (Gene tree)
Gene ID: 112662149
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 16769 bases
Position: chrQKWQ01000609.1:38212362-38229130
Accession: 112662149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020026497	CPSF_A	PF03178.15	4.3e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020030608	CPSF1-201	8103	-	ENSCAFP00020026497	1444 (aa)	XP_025306393	UPI000DC74861

Gene Model

Click here to download ENSCAFG00020020821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020020821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020020821	CPSF1	100	96.542	ENSG00000071894	CPSF1	100	96.542	Homo_sapiens
ENSCAFG00020020821	CPSF1	100	77.935	ENSAPOG00000019621	cpsf1	100	78.003	Acanthochromis_polyacanthus
ENSCAFG00020020821	CPSF1	97	96.712	ENSAMEG00000005557	CPSF1	100	96.712	Ailuropoda_melanoleuca
ENSCAFG00020020821	CPSF1	100	78.023	ENSACIG00000006112	cpsf1	100	78.023	Amphilophus_citrinellus
ENSCAFG00020020821	CPSF1	100	79.190	ENSAOCG00000007120	cpsf1	100	79.121	Amphiprion_ocellaris
ENSCAFG00020020821	CPSF1	100	79.505	ENSAPEG00000005755	cpsf1	100	79.505	Amphiprion_percula
ENSCAFG00020020821	CPSF1	100	77.695	ENSATEG00000011097	cpsf1	100	78.032	Anabas_testudineus
ENSCAFG00020020821	CPSF1	93	82.244	ENSACAG00000009655	CPSF1	100	82.244	Anolis_carolinensis
ENSCAFG00020020821	CPSF1	100	96.401	ENSANAG00000036514	CPSF1	100	96.401	Aotus_nancymaae
ENSCAFG00020020821	CPSF1	100	77.056	ENSACLG00000012231	cpsf1	99	78.632	Astatotilapia_calliptera
ENSCAFG00020020821	CPSF1	100	74.120	ENSAMXG00000008485	cpsf1	100	73.292	Astyanax_mexicanus
ENSCAFG00020020821	CPSF1	100	95.371	ENSBTAG00000008355	CPSF1	100	95.371	Bos_taurus
ENSCAFG00020020821	CPSF1	100	31.845	WBGene00022301	cpsf-1	99	40.282	Caenorhabditis_elegans
ENSCAFG00020020821	CPSF1	100	96.194	ENSCJAG00000021421	CPSF1	100	96.194	Callithrix_jacchus
ENSCAFG00020020821	CPSF1	97	99.857	ENSCAFG00000001600	CPSF1	100	100.000	Canis_familiaris
ENSCAFG00020020821	CPSF1	100	91.655	ENSCHIG00000015833	CPSF1	100	91.655	Capra_hircus
ENSCAFG00020020821	CPSF1	100	96.955	ENSTSYG00000028560	CPSF1	100	96.955	Carlito_syrichta
ENSCAFG00020020821	CPSF1	97	95.204	ENSCAPG00000014921	CPSF1	99	95.204	Cavia_aperea
ENSCAFG00020020821	CPSF1	100	94.810	ENSCPOG00000011448	CPSF1	100	94.810	Cavia_porcellus
ENSCAFG00020020821	CPSF1	100	96.471	ENSCCAG00000037658	CPSF1	100	96.471	Cebus_capucinus
ENSCAFG00020020821	CPSF1	100	96.471	ENSCATG00000037234	CPSF1	100	96.471	Cercocebus_atys
ENSCAFG00020020821	CPSF1	100	96.814	ENSCLAG00000012166	CPSF1	100	96.814	Chinchilla_lanigera
ENSCAFG00020020821	CPSF1	100	96.194	ENSCSAG00000008502	CPSF1	100	96.194	Chlorocebus_sabaeus
ENSCAFG00020020821	CPSF1	99	87.841	ENSCPBG00000018910	CPSF1	96	87.841	Chrysemys_picta_bellii
ENSCAFG00020020821	CPSF1	96	47.994	ENSCING00000000514	-	100	47.923	Ciona_intestinalis
ENSCAFG00020020821	CPSF1	99	48.148	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSCAFG00020020821	CPSF1	99	91.061	ENSCANG00000032760	CPSF1	99	91.061	Colobus_angolensis_palliatus
ENSCAFG00020020821	CPSF1	100	96.122	ENSCGRG00001016344	Cpsf1	100	96.122	Cricetulus_griseus_chok1gshd
ENSCAFG00020020821	CPSF1	100	93.767	ENSCGRG00000003118	Cpsf1	100	93.975	Cricetulus_griseus_crigri
ENSCAFG00020020821	CPSF1	100	77.540	ENSCSEG00000013464	cpsf1	100	77.194	Cynoglossus_semilaevis
ENSCAFG00020020821	CPSF1	85	77.485	ENSCVAG00000014059	cpsf1	100	75.463	Cyprinodon_variegatus
ENSCAFG00020020821	CPSF1	100	79.298	ENSDARG00000034178	cpsf1	100	79.367	Danio_rerio
ENSCAFG00020020821	CPSF1	68	96.812	ENSDNOG00000043654	CPSF1	94	96.812	Dasypus_novemcinctus
ENSCAFG00020020821	CPSF1	96	96.195	ENSDORG00000006278	Cpsf1	99	96.195	Dipodomys_ordii
ENSCAFG00020020821	CPSF1	100	45.020	FBgn0024698	Cpsf160	100	44.916	Drosophila_melanogaster
ENSCAFG00020020821	CPSF1	80	98.658	ENSETEG00000006022	CPSF1	83	98.658	Echinops_telfairi
ENSCAFG00020020821	CPSF1	100	98.407	ENSEASG00005010774	CPSF1	100	98.407	Equus_asinus_asinus
ENSCAFG00020020821	CPSF1	100	98.407	ENSECAG00000022209	CPSF1	100	98.407	Equus_caballus
ENSCAFG00020020821	CPSF1	100	95.640	ENSEEUG00000000471	CPSF1	100	95.640	Erinaceus_europaeus
ENSCAFG00020020821	CPSF1	100	78.181	ENSELUG00000012271	cpsf1	100	78.659	Esox_lucius
ENSCAFG00020020821	CPSF1	100	96.676	ENSFDAG00000016060	CPSF1	100	96.676	Fukomys_damarensis
ENSCAFG00020020821	CPSF1	100	77.098	ENSFHEG00000016801	cpsf1	100	76.960	Fundulus_heteroclitus
ENSCAFG00020020821	CPSF1	100	78.045	ENSGMOG00000000796	cpsf1	100	78.114	Gadus_morhua
ENSCAFG00020020821	CPSF1	95	83.929	ENSGAFG00000018890	cpsf1	100	83.929	Gambusia_affinis
ENSCAFG00020020821	CPSF1	100	78.630	ENSGACG00000008703	cpsf1	100	78.493	Gasterosteus_aculeatus
ENSCAFG00020020821	CPSF1	100	84.207	ENSGAGG00000004276	CPSF1	98	88.245	Gopherus_agassizii
ENSCAFG00020020821	CPSF1	100	96.676	ENSGGOG00000016185	CPSF1	100	96.676	Gorilla_gorilla
ENSCAFG00020020821	CPSF1	100	79.337	ENSHBUG00000018900	cpsf1	100	79.198	Haplochromis_burtoni
ENSCAFG00020020821	CPSF1	100	96.607	ENSHGLG00000016139	CPSF1	100	96.607	Heterocephalus_glaber_female
ENSCAFG00020020821	CPSF1	100	96.537	ENSHGLG00100009750	CPSF1	100	96.537	Heterocephalus_glaber_male
ENSCAFG00020020821	CPSF1	100	76.829	ENSHCOG00000018509	cpsf1	100	76.762	Hippocampus_comes
ENSCAFG00020020821	CPSF1	100	76.253	ENSIPUG00000011259	cpsf1	100	76.253	Ictalurus_punctatus
ENSCAFG00020020821	CPSF1	97	96.148	ENSSTOG00000009957	CPSF1	99	96.148	Ictidomys_tridecemlineatus
ENSCAFG00020020821	CPSF1	100	95.914	ENSJJAG00000023002	Cpsf1	100	95.914	Jaculus_jaculus
ENSCAFG00020020821	CPSF1	91	85.580	ENSKMAG00000001940	cpsf1	99	85.580	Kryptolebias_marmoratus
ENSCAFG00020020821	CPSF1	100	77.313	ENSLBEG00000003601	cpsf1	100	77.718	Labrus_bergylta
ENSCAFG00020020821	CPSF1	88	81.731	ENSLACG00000000233	CPSF1	100	69.410	Latimeria_chalumnae
ENSCAFG00020020821	CPSF1	100	77.877	ENSLOCG00000008484	cpsf1	100	78.015	Lepisosteus_oculatus
ENSCAFG00020020821	CPSF1	97	96.135	ENSLAFG00000022601	CPSF1	100	96.135	Loxodonta_africana
ENSCAFG00020020821	CPSF1	100	96.332	ENSMFAG00000037013	CPSF1	100	96.332	Macaca_fascicularis
ENSCAFG00020020821	CPSF1	100	96.401	ENSMMUG00000007380	CPSF1	100	96.401	Macaca_mulatta
ENSCAFG00020020821	CPSF1	97	96.421	ENSMNEG00000043564	CPSF1	100	96.421	Macaca_nemestrina
ENSCAFG00020020821	CPSF1	100	96.332	ENSMLEG00000043010	CPSF1	100	96.332	Mandrillus_leucophaeus
ENSCAFG00020020821	CPSF1	100	77.845	ENSMAMG00000003803	cpsf1	100	78.273	Mastacembelus_armatus
ENSCAFG00020020821	CPSF1	100	77.194	ENSMZEG00005001168	cpsf1	100	76.987	Maylandia_zebra
ENSCAFG00020020821	CPSF1	100	95.983	ENSMAUG00000003601	Cpsf1	100	95.983	Mesocricetus_auratus
ENSCAFG00020020821	CPSF1	100	97.299	ENSMICG00000015767	CPSF1	100	97.299	Microcebus_murinus
ENSCAFG00020020821	CPSF1	100	96.122	ENSMOCG00000022758	Cpsf1	100	96.122	Microtus_ochrogaster
ENSCAFG00020020821	CPSF1	100	78.867	ENSMMOG00000021245	cpsf1	100	78.798	Mola_mola
ENSCAFG00020020821	CPSF1	100	93.720	ENSMODG00000010755	CPSF1	100	93.720	Monodelphis_domestica
ENSCAFG00020020821	CPSF1	100	77.635	ENSMALG00000020545	cpsf1	100	77.770	Monopterus_albus
ENSCAFG00020020821	CPSF1	100	96.537	MGP_CAROLIEiJ_G0019936	Cpsf1	100	96.537	Mus_caroli
ENSCAFG00020020821	CPSF1	100	96.468	ENSMUSG00000034022	Cpsf1	100	96.468	Mus_musculus
ENSCAFG00020020821	CPSF1	100	96.537	MGP_PahariEiJ_G0019946	Cpsf1	100	96.537	Mus_pahari
ENSCAFG00020020821	CPSF1	100	96.468	MGP_SPRETEiJ_G0020839	Cpsf1	100	96.468	Mus_spretus
ENSCAFG00020020821	CPSF1	93	97.480	ENSMPUG00000006419	CPSF1	93	97.480	Mustela_putorius_furo
ENSCAFG00020020821	CPSF1	100	95.914	ENSNGAG00000022460	Cpsf1	100	95.914	Nannospalax_galili
ENSCAFG00020020821	CPSF1	100	74.828	ENSNBRG00000000813	cpsf1	100	74.897	Neolamprologus_brichardi
ENSCAFG00020020821	CPSF1	86	84.676	ENSNLEG00000010633	-	100	88.426	Nomascus_leucogenys
ENSCAFG00020020821	CPSF1	82	98.837	ENSMEUG00000014922	CPSF1	85	98.837	Notamacropus_eugenii
ENSCAFG00020020821	CPSF1	60	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSCAFG00020020821	CPSF1	100	96.884	ENSODEG00000013995	CPSF1	100	96.884	Octodon_degus
ENSCAFG00020020821	CPSF1	100	79.820	ENSONIG00000007676	cpsf1	100	79.544	Oreochromis_niloticus
ENSCAFG00020020821	CPSF1	58	92.857	ENSOANG00000010716	CPSF1	88	92.857	Ornithorhynchus_anatinus
ENSCAFG00020020821	CPSF1	100	77.597	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSCAFG00020020821	CPSF1	100	77.733	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSCAFG00020020821	CPSF1	100	77.680	ENSORLG00015009979	cpsf1	100	77.612	Oryzias_latipes_hsok
ENSCAFG00020020821	CPSF1	100	77.430	ENSOMEG00000011849	cpsf1	100	77.498	Oryzias_melastigma
ENSCAFG00020020821	CPSF1	100	96.817	ENSOGAG00000000315	CPSF1	100	96.817	Otolemur_garnettii
ENSCAFG00020020821	CPSF1	100	96.678	ENSPPAG00000019280	CPSF1	100	96.678	Pan_paniscus
ENSCAFG00020020821	CPSF1	100	96.678	ENSPTRG00000049288	-	100	96.678	Pan_troglodytes
ENSCAFG00020020821	CPSF1	100	95.034	ENSPTRG00000051253	-	100	95.034	Pan_troglodytes
ENSCAFG00020020821	CPSF1	97	96.278	ENSPANG00000015005	CPSF1	100	96.278	Papio_anubis
ENSCAFG00020020821	CPSF1	100	80.041	ENSPKIG00000002582	cpsf1	100	80.425	Paramormyrops_kingsleyae
ENSCAFG00020020821	CPSF1	100	93.651	ENSPCIG00000009035	CPSF1	100	93.651	Phascolarctos_cinereus
ENSCAFG00020020821	CPSF1	100	76.486	ENSPFOG00000012870	cpsf1	100	76.419	Poecilia_formosa
ENSCAFG00020020821	CPSF1	100	76.435	ENSPREG00000016307	cpsf1	100	76.367	Poecilia_reticulata
ENSCAFG00020020821	CPSF1	100	88.374	ENSPPYG00000018973	CPSF1	100	88.374	Pongo_abelii
ENSCAFG00020020821	CPSF1	91	95.455	ENSPCAG00000011541	CPSF1	94	95.455	Procavia_capensis
ENSCAFG00020020821	CPSF1	100	93.149	ENSPCOG00000020001	CPSF1	100	93.149	Propithecus_coquereli
ENSCAFG00020020821	CPSF1	91	99.429	ENSPVAG00000006761	CPSF1	91	99.429	Pteropus_vampyrus
ENSCAFG00020020821	CPSF1	100	78.308	ENSPNYG00000004906	cpsf1	100	78.172	Pundamilia_nyererei
ENSCAFG00020020821	CPSF1	100	75.310	ENSPNAG00000024395	cpsf1	100	75.310	Pygocentrus_nattereri
ENSCAFG00020020821	CPSF1	100	96.330	ENSRNOG00000030705	Cpsf1	100	96.330	Rattus_norvegicus
ENSCAFG00020020821	CPSF1	100	96.401	ENSRBIG00000044907	CPSF1	100	96.401	Rhinopithecus_bieti
ENSCAFG00020020821	CPSF1	100	96.332	ENSRROG00000044861	CPSF1	100	96.332	Rhinopithecus_roxellana
ENSCAFG00020020821	CPSF1	97	96.206	ENSSBOG00000027177	CPSF1	100	96.206	Saimiri_boliviensis_boliviensis
ENSCAFG00020020821	CPSF1	100	93.582	ENSSHAG00000006500	CPSF1	100	93.582	Sarcophilus_harrisii
ENSCAFG00020020821	CPSF1	100	78.129	ENSSFOG00015004606	cpsf1	100	80.859	Scleropages_formosus
ENSCAFG00020020821	CPSF1	100	78.176	ENSSMAG00000020547	cpsf1	100	78.378	Scophthalmus_maximus
ENSCAFG00020020821	CPSF1	100	79.020	ENSSDUG00000001100	cpsf1	100	78.951	Seriola_dumerili
ENSCAFG00020020821	CPSF1	100	79.144	ENSSLDG00000003619	cpsf1	100	79.144	Seriola_lalandi_dorsalis
ENSCAFG00020020821	CPSF1	89	97.917	ENSSARG00000003643	CPSF1	92	97.917	Sorex_araneus
ENSCAFG00020020821	CPSF1	96	88.223	ENSSPUG00000014396	CPSF1	99	88.223	Sphenodon_punctatus
ENSCAFG00020020821	CPSF1	100	77.920	ENSSPAG00000005349	cpsf1	100	78.190	Stegastes_partitus
ENSCAFG00020020821	CPSF1	100	96.814	ENSSSCG00000005906	CPSF1	100	96.814	Sus_scrofa
ENSCAFG00020020821	CPSF1	96	78.175	ENSTRUG00000013134	cpsf1	99	78.105	Takifugu_rubripes
ENSCAFG00020020821	CPSF1	100	78.669	ENSTNIG00000014027	cpsf1	100	78.326	Tetraodon_nigroviridis
ENSCAFG00020020821	CPSF1	77	88.508	ENSTBEG00000001756	CPSF1	91	88.508	Tupaia_belangeri
ENSCAFG00020020821	CPSF1	90	97.927	ENSTTRG00000001937	CPSF1	90	97.927	Tursiops_truncatus
ENSCAFG00020020821	CPSF1	97	98.498	ENSUAMG00000006476	CPSF1	98	98.498	Ursus_americanus
ENSCAFG00020020821	CPSF1	100	77.555	ENSXCOG00000003608	cpsf1	100	77.555	Xiphophorus_couchianus
ENSCAFG00020020821	CPSF1	100	77.310	ENSXMAG00000005798	cpsf1	100	77.172	Xiphophorus_maculatus