EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020020948 (Gene tree)
Gene ID: 112659822
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 29733 bases
Position: chrQKWQ01000243.1:9041186-9070918
Accession: 112659822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020026839	PWI	PF01480.17	7e-30	1	1
ENSCAFP00020026846	PWI	PF01480.17	7e-30	1	1
ENSCAFP00020026837	PWI	PF01480.17	7.5e-30	1	1
ENSCAFP00020026829	PWI	PF01480.17	7.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020030993	SRRM1-203	2589	-	ENSCAFP00020026839	862 (aa)	-	-
ENSCAFT00020030990	SRRM1-202	2715	-	ENSCAFP00020026837	904 (aa)	XP_025302746	UPI00004BD3B8
ENSCAFT00020031000	SRRM1-204	2430	-	ENSCAFP00020026846	809 (aa)	-	-
ENSCAFT00020030982	SRRM1-201	2751	-	ENSCAFP00020026829	916 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020020948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020020948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020020948	SRRM1	99	90.435	ENSCAFG00020000003	-	99	90.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020020948	SRRM1	100	98.230	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSCAFG00020020948	SRRM1	100	97.386	ENSAMEG00000010075	SRRM1	100	97.386	Ailuropoda_melanoleuca
ENSCAFG00020020948	SRRM1	99	98.875	ENSANAG00000035606	SRRM1	100	97.788	Aotus_nancymaae
ENSCAFG00020020948	SRRM1	100	98.009	ENSBTAG00000013772	SRRM1	100	98.009	Bos_taurus
ENSCAFG00020020948	SRRM1	100	95.316	ENSCJAG00000020822	SRRM1	100	96.955	Callithrix_jacchus
ENSCAFG00020020948	SRRM1	100	96.616	ENSCHIG00000014656	SRRM1	100	96.616	Capra_hircus
ENSCAFG00020020948	SRRM1	100	97.898	ENSTSYG00000006782	SRRM1	100	97.898	Carlito_syrichta
ENSCAFG00020020948	SRRM1	98	95.082	ENSCAPG00000011473	SRRM1	88	95.082	Cavia_aperea
ENSCAFG00020020948	SRRM1	100	95.354	ENSCPOG00000015594	SRRM1	100	95.354	Cavia_porcellus
ENSCAFG00020020948	SRRM1	99	98.875	ENSCCAG00000029474	SRRM1	100	97.677	Cebus_capucinus
ENSCAFG00020020948	SRRM1	100	98.009	ENSCATG00000031303	SRRM1	100	98.009	Cercocebus_atys
ENSCAFG00020020948	SRRM1	100	96.239	ENSCLAG00000014592	SRRM1	100	96.239	Chinchilla_lanigera
ENSCAFG00020020948	SRRM1	74	97.500	ENSCHOG00000000027	SRRM1	73	97.500	Choloepus_hoffmanni
ENSCAFG00020020948	SRRM1	100	97.898	ENSCANG00000028271	SRRM1	100	97.898	Colobus_angolensis_palliatus
ENSCAFG00020020948	SRRM1	99	92.998	ENSDNOG00000049141	SRRM1	90	92.998	Dasypus_novemcinctus
ENSCAFG00020020948	SRRM1	100	96.078	ENSEASG00005004270	SRRM1	100	96.078	Equus_asinus_asinus
ENSCAFG00020020948	SRRM1	100	97.677	ENSECAG00000026981	SRRM1	100	97.677	Equus_caballus
ENSCAFG00020020948	SRRM1	100	99.336	ENSFCAG00000000678	-	100	99.336	Felis_catus
ENSCAFG00020020948	SRRM1	99	98.000	ENSFDAG00000009903	SRRM1	100	96.903	Fukomys_damarensis
ENSCAFG00020020948	SRRM1	99	99.125	ENSGGOG00000005209	SRRM1	100	98.119	Gorilla_gorilla
ENSCAFG00020020948	SRRM1	99	98.250	ENSHGLG00000017105	SRRM1	100	97.124	Heterocephalus_glaber_female
ENSCAFG00020020948	SRRM1	98	97.739	ENSHGLG00100016772	SRRM1	99	96.667	Heterocephalus_glaber_male
ENSCAFG00020020948	SRRM1	100	98.119	ENSSTOG00000014640	SRRM1	100	98.119	Ictidomys_tridecemlineatus
ENSCAFG00020020948	SRRM1	99	95.620	ENSJJAG00000018643	Srrm1	89	95.620	Jaculus_jaculus
ENSCAFG00020020948	SRRM1	100	93.637	ENSLAFG00000013830	SRRM1	100	93.637	Loxodonta_africana
ENSCAFG00020020948	SRRM1	99	70.210	ENSMFAG00000038841	-	61	78.788	Macaca_fascicularis
ENSCAFG00020020948	SRRM1	100	98.009	ENSMFAG00000025726	SRRM1	100	98.009	Macaca_fascicularis
ENSCAFG00020020948	SRRM1	57	79.192	ENSMMUG00000039269	-	59	78.586	Macaca_mulatta
ENSCAFG00020020948	SRRM1	100	97.898	ENSMMUG00000006645	SRRM1	100	97.898	Macaca_mulatta
ENSCAFG00020020948	SRRM1	100	98.009	ENSMNEG00000039415	SRRM1	100	98.009	Macaca_nemestrina
ENSCAFG00020020948	SRRM1	62	71.348	ENSMLEG00000032221	-	58	74.291	Mandrillus_leucophaeus
ENSCAFG00020020948	SRRM1	97	93.121	ENSMLEG00000038030	-	92	98.204	Mandrillus_leucophaeus
ENSCAFG00020020948	SRRM1	99	94.161	ENSMAUG00000015705	Srrm1	89	94.161	Mesocricetus_auratus
ENSCAFG00020020948	SRRM1	100	98.119	ENSMICG00000006553	SRRM1	100	98.119	Microcebus_murinus
ENSCAFG00020020948	SRRM1	99	94.275	MGP_CAROLIEiJ_G0026636	Srrm1	100	85.965	Mus_caroli
ENSCAFG00020020948	SRRM1	99	94.153	ENSMUSG00000028809	Srrm1	100	85.965	Mus_musculus
ENSCAFG00020020948	SRRM1	99	96.030	MGP_PahariEiJ_G0028969	Srrm1	100	85.965	Mus_pahari
ENSCAFG00020020948	SRRM1	99	94.397	MGP_SPRETEiJ_G0027616	Srrm1	100	85.965	Mus_spretus
ENSCAFG00020020948	SRRM1	99	95.349	ENSMLUG00000006246	SRRM1	89	95.349	Myotis_lucifugus
ENSCAFG00020020948	SRRM1	99	94.397	ENSNGAG00000014562	Srrm1	89	96.035	Nannospalax_galili
ENSCAFG00020020948	SRRM1	100	98.230	ENSNLEG00000008966	SRRM1	100	98.230	Nomascus_leucogenys
ENSCAFG00020020948	SRRM1	71	92.857	ENSMEUG00000014704	SRRM1	70	92.632	Notamacropus_eugenii
ENSCAFG00020020948	SRRM1	73	100.000	ENSODEG00000013381	SRRM1	64	93.333	Octodon_degus
ENSCAFG00020020948	SRRM1	99	95.823	ENSOCUG00000008438	SRRM1	100	94.788	Oryctolagus_cuniculus
ENSCAFG00020020948	SRRM1	99	96.929	ENSOGAG00000010210	SRRM1	100	95.861	Otolemur_garnettii
ENSCAFG00020020948	SRRM1	99	96.314	ENSOARG00000006453	SRRM1	99	96.462	Ovis_aries
ENSCAFG00020020948	SRRM1	100	98.119	ENSPPAG00000043918	SRRM1	100	98.119	Pan_paniscus
ENSCAFG00020020948	SRRM1	100	99.336	ENSPPRG00000002509	SRRM1	100	99.336	Panthera_pardus
ENSCAFG00020020948	SRRM1	100	95.351	ENSPTIG00000008778	-	100	95.351	Panthera_tigris_altaica
ENSCAFG00020020948	SRRM1	100	98.230	ENSPTRG00000000349	SRRM1	100	98.230	Pan_troglodytes
ENSCAFG00020020948	SRRM1	99	66.249	ENSPANG00000035568	-	59	76.721	Papio_anubis
ENSCAFG00020020948	SRRM1	100	97.363	ENSPANG00000010194	SRRM1	100	97.363	Papio_anubis
ENSCAFG00020020948	SRRM1	99	96.030	ENSPEMG00000006254	Srrm1	88	96.030	Peromyscus_maniculatus_bairdii
ENSCAFG00020020948	SRRM1	53	94.660	ENSPCIG00000009214	SRRM1	60	84.762	Phascolarctos_cinereus
ENSCAFG00020020948	SRRM1	100	95.865	ENSPPYG00000001716	SRRM1	100	95.865	Pongo_abelii
ENSCAFG00020020948	SRRM1	90	81.903	ENSPCAG00000015138	SRRM1	81	81.903	Procavia_capensis
ENSCAFG00020020948	SRRM1	100	97.803	ENSPCOG00000021311	SRRM1	100	97.803	Propithecus_coquereli
ENSCAFG00020020948	SRRM1	100	96.187	ENSPVAG00000005836	SRRM1	100	96.187	Pteropus_vampyrus
ENSCAFG00020020948	SRRM1	99	95.782	ENSRNOG00000018194	Srrm1	98	94.146	Rattus_norvegicus
ENSCAFG00020020948	SRRM1	99	95.149	ENSRBIG00000035461	SRRM1	93	96.990	Rhinopithecus_bieti
ENSCAFG00020020948	SRRM1	100	97.898	ENSRROG00000035151	SRRM1	100	97.898	Rhinopithecus_roxellana
ENSCAFG00020020948	SRRM1	99	98.509	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSCAFG00020020948	SRRM1	57	96.117	ENSSHAG00000011061	SRRM1	53	95.833	Sarcophilus_harrisii
ENSCAFG00020020948	SRRM1	61	95.082	ENSSARG00000013718	SRRM1	60	95.082	Sorex_araneus
ENSCAFG00020020948	SRRM1	68	88.129	ENSSPUG00000015890	SRRM1	57	78.664	Sphenodon_punctatus
ENSCAFG00020020948	SRRM1	99	97.036	ENSSSCG00000032947	SRRM1	100	98.417	Sus_scrofa
ENSCAFG00020020948	SRRM1	100	95.534	ENSTBEG00000000100	SRRM1	100	95.534	Tupaia_belangeri
ENSCAFG00020020948	SRRM1	99	95.604	ENSTTRG00000009365	SRRM1	100	95.604	Tursiops_truncatus
ENSCAFG00020020948	SRRM1	94	99.738	ENSUMAG00000013121	SRRM1	90	99.738	Ursus_maritimus
ENSCAFG00020020948	SRRM1	96	94.104	ENSVPAG00000007698	SRRM1	100	94.104	Vicugna_pacos
ENSCAFG00020020948	SRRM1	99	98.756	ENSVVUG00000026966	SRRM1	100	96.759	Vulpes_vulpes