EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020021160 (Gene tree)
Gene ID: 112640224
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 51786 bases
Position: chrQKWQ01001090.1:8075698-8127483
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020027092	Ago_hook	PF10427.9	3.2e-19	1	1
ENSCAFP00020027081	Ago_hook	PF10427.9	4.1e-19	1	1
ENSCAFP00020027075	Ago_hook	PF10427.9	4.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020031291	TNRC6A-204	1890	-	ENSCAFP00020027096	629 (aa)	-	-
ENSCAFT00020031265	TNRC6A-201	5787	-	ENSCAFP00020027075	1928 (aa)	-	-
ENSCAFT00020031271	TNRC6A-202	5622	-	ENSCAFP00020027081	1873 (aa)	-	-
ENSCAFT00020031283	TNRC6A-203	5547	-	ENSCAFP00020027092	1848 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020021160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020021160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020021160	TNRC6A	98	41.945	ENSCAFG00020006661	TNRC6C	99	42.496
ENSCAFG00020021160	TNRC6A	99	39.047	ENSCAFG00020002189	TNRC6B	100	37.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020021160	TNRC6A	99	95.079	ENSG00000090905	TNRC6A	98	94.488	Homo_sapiens
ENSCAFG00020021160	TNRC6A	99	97.432	ENSAMEG00000009333	TNRC6A	99	97.432	Ailuropoda_melanoleuca
ENSCAFG00020021160	TNRC6A	99	81.221	ENSAPLG00000009978	TNRC6A	100	81.273	Anas_platyrhynchos
ENSCAFG00020021160	TNRC6A	95	54.550	ENSACAG00000011857	TNRC6A	97	55.522	Anolis_carolinensis
ENSCAFG00020021160	TNRC6A	99	94.861	ENSANAG00000025252	TNRC6A	99	94.607	Aotus_nancymaae
ENSCAFG00020021160	TNRC6A	93	56.278	ENSAMXG00000019919	tnrc6a	99	56.210	Astyanax_mexicanus
ENSCAFG00020021160	TNRC6A	99	94.590	ENSBTAG00000017999	TNRC6A	99	94.380	Bos_taurus
ENSCAFG00020021160	TNRC6A	99	94.676	ENSCJAG00000020677	TNRC6A	98	94.038	Callithrix_jacchus
ENSCAFG00020021160	TNRC6A	100	97.869	ENSCAFG00000017531	TNRC6A	99	97.869	Canis_familiaris
ENSCAFG00020021160	TNRC6A	99	94.184	ENSCHIG00000019448	TNRC6A	99	93.028	Capra_hircus
ENSCAFG00020021160	TNRC6A	99	95.013	ENSTSYG00000012711	TNRC6A	99	95.066	Carlito_syrichta
ENSCAFG00020021160	TNRC6A	99	94.153	ENSCPOG00000036684	TNRC6A	98	93.237	Cavia_porcellus
ENSCAFG00020021160	TNRC6A	99	95.071	ENSCCAG00000033664	TNRC6A	99	95.118	Cebus_capucinus
ENSCAFG00020021160	TNRC6A	99	94.754	ENSCATG00000019284	TNRC6A	99	93.909	Cercocebus_atys
ENSCAFG00020021160	TNRC6A	99	90.097	ENSCLAG00000010217	TNRC6A	98	89.297	Chinchilla_lanigera
ENSCAFG00020021160	TNRC6A	99	95.388	ENSCSAG00000006561	TNRC6A	98	94.898	Chlorocebus_sabaeus
ENSCAFG00020021160	TNRC6A	94	90.265	ENSCHOG00000009374	TNRC6A	92	90.334	Choloepus_hoffmanni
ENSCAFG00020021160	TNRC6A	93	81.409	ENSCPBG00000001881	TNRC6A	99	81.467	Chrysemys_picta_bellii
ENSCAFG00020021160	TNRC6A	99	95.176	ENSCANG00000041549	TNRC6A	98	94.688	Colobus_angolensis_palliatus
ENSCAFG00020021160	TNRC6A	99	92.715	ENSCGRG00001015021	Tnrc6a	99	92.715	Cricetulus_griseus_chok1gshd
ENSCAFG00020021160	TNRC6A	99	91.922	ENSCGRG00000013351	Tnrc6a	98	90.793	Cricetulus_griseus_crigri
ENSCAFG00020021160	TNRC6A	93	56.016	ENSDARG00000079688	tnrc6a	99	56.067	Danio_rerio
ENSCAFG00020021160	TNRC6A	99	92.412	ENSDNOG00000013989	TNRC6A	99	91.944	Dasypus_novemcinctus
ENSCAFG00020021160	TNRC6A	99	84.313	ENSETEG00000014658	TNRC6A	99	83.846	Echinops_telfairi
ENSCAFG00020021160	TNRC6A	99	94.861	ENSEASG00005017693	TNRC6A	99	94.809	Equus_asinus_asinus
ENSCAFG00020021160	TNRC6A	99	94.861	ENSECAG00000025056	TNRC6A	99	94.323	Equus_caballus
ENSCAFG00020021160	TNRC6A	99	88.586	ENSEEUG00000004530	TNRC6A	99	88.586	Erinaceus_europaeus
ENSCAFG00020021160	TNRC6A	99	95.226	ENSFCAG00000025236	TNRC6A	99	94.581	Felis_catus
ENSCAFG00020021160	TNRC6A	99	78.335	ENSFALG00000003757	TNRC6A	97	78.738	Ficedula_albicollis
ENSCAFG00020021160	TNRC6A	93	81.729	ENSGALG00000006068	TNRC6A	99	82.190	Gallus_gallus
ENSCAFG00020021160	TNRC6A	93	80.794	ENSGAGG00000023209	TNRC6A	99	81.139	Gopherus_agassizii
ENSCAFG00020021160	TNRC6A	99	95.021	ENSGGOG00000005137	TNRC6A	99	95.126	Gorilla_gorilla
ENSCAFG00020021160	TNRC6A	96	74.130	ENSHGLG00000007368	-	93	73.864	Heterocephalus_glaber_female
ENSCAFG00020021160	TNRC6A	99	93.669	ENSHGLG00000012474	-	97	93.615	Heterocephalus_glaber_female
ENSCAFG00020021160	TNRC6A	98	94.185	ENSHGLG00100012496	-	97	94.295	Heterocephalus_glaber_male
ENSCAFG00020021160	TNRC6A	99	94.041	ENSSTOG00000023394	TNRC6A	97	93.614	Ictidomys_tridecemlineatus
ENSCAFG00020021160	TNRC6A	99	69.024	ENSLACG00000006277	TNRC6A	100	69.799	Latimeria_chalumnae
ENSCAFG00020021160	TNRC6A	99	79.249	ENSLOCG00000005517	tnrc6a	90	79.249	Lepisosteus_oculatus
ENSCAFG00020021160	TNRC6A	99	93.337	ENSLAFG00000004209	TNRC6A	99	93.488	Loxodonta_africana
ENSCAFG00020021160	TNRC6A	99	93.757	ENSMFAG00000003824	TNRC6A	99	93.809	Macaca_fascicularis
ENSCAFG00020021160	TNRC6A	99	95.123	ENSMMUG00000020428	TNRC6A	98	94.635	Macaca_mulatta
ENSCAFG00020021160	TNRC6A	99	94.833	ENSMNEG00000034854	TNRC6A	99	93.909	Macaca_nemestrina
ENSCAFG00020021160	TNRC6A	99	93.409	ENSMLEG00000042737	TNRC6A	97	93.202	Mandrillus_leucophaeus
ENSCAFG00020021160	TNRC6A	98	79.802	ENSMGAG00000006455	TNRC6A	94	81.857	Meleagris_gallopavo
ENSCAFG00020021160	TNRC6A	99	92.591	ENSMAUG00000012750	Tnrc6a	98	91.760	Mesocricetus_auratus
ENSCAFG00020021160	TNRC6A	99	95.393	ENSMICG00000030685	TNRC6A	99	95.393	Microcebus_murinus
ENSCAFG00020021160	TNRC6A	99	92.962	ENSMOCG00000000152	Tnrc6a	98	91.912	Microtus_ochrogaster
ENSCAFG00020021160	TNRC6A	99	81.627	ENSMODG00000016348	TNRC6A	96	81.342	Monodelphis_domestica
ENSCAFG00020021160	TNRC6A	99	91.807	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	92.852	Mus_caroli
ENSCAFG00020021160	TNRC6A	99	91.987	ENSMUSG00000052707	Tnrc6a	99	93.138	Mus_musculus
ENSCAFG00020021160	TNRC6A	99	92.154	MGP_PahariEiJ_G0013635	Tnrc6a	100	93.424	Mus_pahari
ENSCAFG00020021160	TNRC6A	99	91.820	MGP_SPRETEiJ_G0031539	Tnrc6a	100	92.995	Mus_spretus
ENSCAFG00020021160	TNRC6A	99	85.621	ENSMPUG00000012324	TNRC6A	100	85.294	Mustela_putorius_furo
ENSCAFG00020021160	TNRC6A	99	92.437	ENSMLUG00000002701	TNRC6A	100	92.384	Myotis_lucifugus
ENSCAFG00020021160	TNRC6A	99	93.653	ENSNGAG00000020702	Tnrc6a	98	92.815	Nannospalax_galili
ENSCAFG00020021160	TNRC6A	99	94.384	ENSNLEG00000011851	TNRC6A	98	94.438	Nomascus_leucogenys
ENSCAFG00020021160	TNRC6A	76	87.154	ENSMEUG00000015959	-	74	87.265	Notamacropus_eugenii
ENSCAFG00020021160	TNRC6A	94	91.791	ENSOPRG00000005819	TNRC6A	94	91.791	Ochotona_princeps
ENSCAFG00020021160	TNRC6A	99	88.750	ENSODEG00000012802	TNRC6A	97	89.076	Octodon_degus
ENSCAFG00020021160	TNRC6A	88	82.271	ENSOANG00000007672	TNRC6A	99	82.322	Ornithorhynchus_anatinus
ENSCAFG00020021160	TNRC6A	99	91.763	ENSOCUG00000004325	TNRC6A	100	91.710	Oryctolagus_cuniculus
ENSCAFG00020021160	TNRC6A	99	95.233	ENSOGAG00000006666	TNRC6A	99	94.693	Otolemur_garnettii
ENSCAFG00020021160	TNRC6A	99	93.613	ENSOARG00000017950	TNRC6A	98	94.988	Ovis_aries
ENSCAFG00020021160	TNRC6A	99	94.825	ENSPPAG00000028379	TNRC6A	99	94.773	Pan_paniscus
ENSCAFG00020021160	TNRC6A	99	95.226	ENSPPRG00000005861	TNRC6A	98	94.581	Panthera_pardus
ENSCAFG00020021160	TNRC6A	99	93.927	ENSPTIG00000006346	TNRC6A	98	93.500	Panthera_tigris_altaica
ENSCAFG00020021160	TNRC6A	99	94.619	ENSPTRG00000007898	TNRC6A	99	94.723	Pan_troglodytes
ENSCAFG00020021160	TNRC6A	99	92.891	ENSPANG00000018523	TNRC6A	99	92.075	Papio_anubis
ENSCAFG00020021160	TNRC6A	89	60.883	ENSPKIG00000012859	tnrc6a	99	58.994	Paramormyrops_kingsleyae
ENSCAFG00020021160	TNRC6A	79	76.824	ENSPSIG00000003965	TNRC6A	100	76.892	Pelodiscus_sinensis
ENSCAFG00020021160	TNRC6A	99	92.482	ENSPEMG00000016318	Tnrc6a	98	91.439	Peromyscus_maniculatus_bairdii
ENSCAFG00020021160	TNRC6A	99	82.848	ENSPCIG00000012106	TNRC6A	100	83.159	Phascolarctos_cinereus
ENSCAFG00020021160	TNRC6A	99	94.351	ENSPPYG00000007202	TNRC6A	98	93.922	Pongo_abelii
ENSCAFG00020021160	TNRC6A	94	100.000	ENSPCAG00000008260	TNRC6A	93	100.000	Procavia_capensis
ENSCAFG00020021160	TNRC6A	99	93.085	ENSPCOG00000010134	TNRC6A	98	92.612	Propithecus_coquereli
ENSCAFG00020021160	TNRC6A	89	70.691	ENSPVAG00000012066	TNRC6A	97	71.639	Pteropus_vampyrus
ENSCAFG00020021160	TNRC6A	99	91.689	ENSRNOG00000024737	Tnrc6a	98	91.202	Rattus_norvegicus
ENSCAFG00020021160	TNRC6A	99	95.438	ENSRBIG00000014222	TNRC6A	99	94.948	Rhinopithecus_bieti
ENSCAFG00020021160	TNRC6A	99	95.385	ENSRROG00000032360	TNRC6A	98	94.896	Rhinopithecus_roxellana
ENSCAFG00020021160	TNRC6A	99	94.232	ENSSBOG00000036197	TNRC6A	100	96.021	Saimiri_boliviensis_boliviensis
ENSCAFG00020021160	TNRC6A	93	83.362	ENSSHAG00000008811	TNRC6A	99	83.647	Sarcophilus_harrisii
ENSCAFG00020021160	TNRC6A	88	64.970	ENSSFOG00015008920	tnrc6a	99	64.962	Scleropages_formosus
ENSCAFG00020021160	TNRC6A	73	83.877	ENSSARG00000002479	TNRC6A	89	84.239	Sorex_araneus
ENSCAFG00020021160	TNRC6A	93	77.490	ENSSPUG00000010525	TNRC6A	100	77.884	Sphenodon_punctatus
ENSCAFG00020021160	TNRC6A	99	95.062	ENSSSCG00000038870	TNRC6A	100	96.663	Sus_scrofa
ENSCAFG00020021160	TNRC6A	99	80.120	ENSTGUG00000006142	TNRC6A	98	79.549	Taeniopygia_guttata
ENSCAFG00020021160	TNRC6A	99	92.771	ENSTBEG00000014965	TNRC6A	99	92.719	Tupaia_belangeri
ENSCAFG00020021160	TNRC6A	92	96.009	ENSTTRG00000002008	TNRC6A	90	96.009	Tursiops_truncatus
ENSCAFG00020021160	TNRC6A	80	97.738	ENSUAMG00000006656	-	93	97.738	Ursus_americanus
ENSCAFG00020021160	TNRC6A	99	97.269	ENSUMAG00000008274	TNRC6A	100	97.890	Ursus_maritimus
ENSCAFG00020021160	TNRC6A	56	85.604	ENSVPAG00000010764	-	56	85.604	Vicugna_pacos
ENSCAFG00020021160	TNRC6A	100	97.443	ENSVVUG00000005380	TNRC6A	99	98.426	Vulpes_vulpes
ENSCAFG00020021160	TNRC6A	97	63.076	ENSXETG00000030437	TNRC6A	99	65.213	Xenopus_tropicalis