EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020021344 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 1785 bases
Position: chrQKWQ01001491.1:6771786-6773570
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020027188	RRM_1	PF00076.22	6.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020031393	-	649	-	ENSCAFP00020027188	90 (aa)	-	UPI00005A5C6F

Gene Model

Click here to download ENSCAFG00020021344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020021344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020021344	-	82	86.486	ENSCAFG00020017705	-	62	86.486
ENSCAFG00020021344	-	69	53.226	ENSCAFG00020025109	-	76	53.226
ENSCAFG00020021344	-	98	79.545	ENSCAFG00020020106	-	80	79.545
ENSCAFG00020021344	-	84	32.895	ENSCAFG00020017577	-	66	32.895
ENSCAFG00020021344	-	93	42.857	ENSCAFG00020008202	-	62	42.857
ENSCAFG00020021344	-	77	56.522	ENSCAFG00020024552	RBMXL1	79	58.462
ENSCAFG00020021344	-	56	48.000	ENSCAFG00020011757	-	50	48.000
ENSCAFG00020021344	-	93	33.333	ENSCAFG00020022807	SRSF7	55	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020021344	-	90	66.667	ENSG00000099622	CIRBP	100	68.421	Homo_sapiens
ENSCAFG00020021344	-	90	87.654	ENSG00000102317	RBM3	50	88.750	Homo_sapiens
ENSCAFG00020021344	-	90	69.136	ENSACAG00000023931	-	50	71.622	Anolis_carolinensis
ENSCAFG00020021344	-	90	65.432	ENSANAG00000027805	-	58	74.000	Aotus_nancymaae
ENSCAFG00020021344	-	100	94.444	ENSANAG00000028883	-	100	94.444	Aotus_nancymaae
ENSCAFG00020021344	-	100	95.556	ENSBTAG00000025848	RBM3	100	95.556	Bos_taurus
ENSCAFG00020021344	-	100	94.444	ENSCJAG00000047341	-	100	94.444	Callithrix_jacchus
ENSCAFG00020021344	-	82	77.027	ENSCJAG00000047359	-	52	77.027	Callithrix_jacchus
ENSCAFG00020021344	-	90	81.481	ENSCAFG00000016002	-	52	82.500	Canis_familiaris
ENSCAFG00020021344	-	90	86.420	ENSCHIG00000009007	RBM3	56	86.420	Capra_hircus
ENSCAFG00020021344	-	89	73.750	ENSTSYG00000035938	-	55	73.750	Carlito_syrichta
ENSCAFG00020021344	-	100	97.778	ENSTSYG00000008670	-	100	97.778	Carlito_syrichta
ENSCAFG00020021344	-	90	77.778	ENSTSYG00000031540	-	56	77.778	Carlito_syrichta
ENSCAFG00020021344	-	83	84.000	ENSTSYG00000035220	-	54	84.000	Carlito_syrichta
ENSCAFG00020021344	-	100	93.333	ENSCCAG00000038019	-	100	93.333	Cebus_capucinus
ENSCAFG00020021344	-	91	87.805	ENSCATG00000038524	-	51	87.805	Cercocebus_atys
ENSCAFG00020021344	-	100	95.556	ENSCATG00000029986	-	100	95.556	Cercocebus_atys
ENSCAFG00020021344	-	82	93.243	ENSCLAG00000002908	RBM3	50	90.000	Chinchilla_lanigera
ENSCAFG00020021344	-	90	87.654	ENSCSAG00000013242	RBM3	50	88.750	Chlorocebus_sabaeus
ENSCAFG00020021344	-	90	85.185	ENSCHOG00000007642	RBM3	50	86.250	Choloepus_hoffmanni
ENSCAFG00020021344	-	90	69.136	ENSCPBG00000021863	-	50	71.622	Chrysemys_picta_bellii
ENSCAFG00020021344	-	100	95.556	ENSCANG00000037907	-	100	95.556	Colobus_angolensis_palliatus
ENSCAFG00020021344	-	90	86.420	ENSCANG00000014668	-	50	87.500	Colobus_angolensis_palliatus
ENSCAFG00020021344	-	90	87.654	ENSDNOG00000032565	-	50	88.750	Dasypus_novemcinctus
ENSCAFG00020021344	-	98	62.105	ENSDNOG00000040058	-	59	62.105	Dasypus_novemcinctus
ENSCAFG00020021344	-	82	93.243	ENSDORG00000000182	Rbm3	50	90.000	Dipodomys_ordii
ENSCAFG00020021344	-	98	52.632	ENSEASG00005023389	-	80	52.632	Equus_asinus_asinus
ENSCAFG00020021344	-	100	97.778	ENSECAG00000024257	RBM3	100	97.778	Equus_caballus
ENSCAFG00020021344	-	98	60.227	ENSECAG00000002141	-	100	60.227	Equus_caballus
ENSCAFG00020021344	-	72	63.077	ENSECAG00000038298	-	51	63.077	Equus_caballus
ENSCAFG00020021344	-	80	52.778	ENSELUG00000004652	-	53	52.778	Esox_lucius
ENSCAFG00020021344	-	88	67.089	ENSELUG00000019617	-	51	61.364	Esox_lucius
ENSCAFG00020021344	-	94	71.765	ENSFCAG00000021952	-	96	71.765	Felis_catus
ENSCAFG00020021344	-	100	77.174	ENSFCAG00000030938	-	100	77.174	Felis_catus
ENSCAFG00020021344	-	90	66.667	ENSFALG00000014000	CIRBP	52	67.500	Ficedula_albicollis
ENSCAFG00020021344	-	82	93.243	ENSFDAG00000007909	RBM3	50	90.000	Fukomys_damarensis
ENSCAFG00020021344	-	90	69.136	ENSGAGG00000016473	-	50	71.622	Gopherus_agassizii
ENSCAFG00020021344	-	81	72.000	ENSGGOG00000025080	-	63	72.000	Gorilla_gorilla
ENSCAFG00020021344	-	100	95.556	ENSGGOG00000005864	RBM3	100	95.556	Gorilla_gorilla
ENSCAFG00020021344	-	82	87.838	ENSHGLG00000010919	-	53	87.838	Heterocephalus_glaber_female
ENSCAFG00020021344	-	89	77.500	ENSHGLG00000013635	-	50	77.500	Heterocephalus_glaber_female
ENSCAFG00020021344	-	82	93.243	ENSHGLG00000006552	RBM3	50	90.000	Heterocephalus_glaber_female
ENSCAFG00020021344	-	82	93.243	ENSHGLG00100017487	-	50	90.000	Heterocephalus_glaber_male
ENSCAFG00020021344	-	89	77.500	ENSHGLG00100015330	-	50	77.500	Heterocephalus_glaber_male
ENSCAFG00020021344	-	82	87.838	ENSHGLG00100014556	-	53	87.838	Heterocephalus_glaber_male
ENSCAFG00020021344	-	82	91.892	ENSSTOG00000027493	-	50	88.750	Ictidomys_tridecemlineatus
ENSCAFG00020021344	-	82	93.243	ENSJJAG00000012962	-	50	90.000	Jaculus_jaculus
ENSCAFG00020021344	-	88	69.136	ENSLOCG00000005031	-	53	70.000	Lepisosteus_oculatus
ENSCAFG00020021344	-	80	69.444	ENSLOCG00000000112	-	60	69.444	Lepisosteus_oculatus
ENSCAFG00020021344	-	91	87.805	ENSMFAG00000003836	-	59	87.805	Macaca_fascicularis
ENSCAFG00020021344	-	100	95.556	ENSMFAG00000003694	RBM3	100	95.556	Macaca_fascicularis
ENSCAFG00020021344	-	89	67.500	ENSMMUG00000022101	CIRBP	100	62.500	Macaca_mulatta
ENSCAFG00020021344	-	100	95.556	ENSMMUG00000018349	-	100	95.556	Macaca_mulatta
ENSCAFG00020021344	-	91	86.585	ENSMMUG00000037648	-	51	86.585	Macaca_mulatta
ENSCAFG00020021344	-	100	95.556	ENSMNEG00000042115	-	100	95.556	Macaca_nemestrina
ENSCAFG00020021344	-	91	87.805	ENSMNEG00000000984	-	51	87.805	Macaca_nemestrina
ENSCAFG00020021344	-	100	95.556	ENSMLEG00000041745	-	100	95.556	Mandrillus_leucophaeus
ENSCAFG00020021344	-	91	86.585	ENSMLEG00000027951	-	51	86.585	Mandrillus_leucophaeus
ENSCAFG00020021344	-	82	89.189	ENSMAUG00000008646	-	56	89.189	Mesocricetus_auratus
ENSCAFG00020021344	-	98	81.818	ENSMICG00000028982	-	89	81.818	Microcebus_murinus
ENSCAFG00020021344	-	90	88.889	ENSMICG00000047440	-	50	90.000	Microcebus_murinus
ENSCAFG00020021344	-	82	93.243	ENSMOCG00000001511	Rbm3	50	90.000	Microtus_ochrogaster
ENSCAFG00020021344	-	90	67.901	MGP_CAROLIEiJ_G0015568	Cirbp	73	67.901	Mus_caroli
ENSCAFG00020021344	-	100	97.778	MGP_CAROLIEiJ_G0032914	-	100	97.778	Mus_caroli
ENSCAFG00020021344	-	90	67.901	ENSMUSG00000045193	Cirbp	73	67.901	Mus_musculus
ENSCAFG00020021344	-	100	97.778	ENSMUSG00000031167	Rbm3	100	97.778	Mus_musculus
ENSCAFG00020021344	-	100	97.778	MGP_PahariEiJ_G0031463	Rbm3	100	97.778	Mus_pahari
ENSCAFG00020021344	-	90	67.901	MGP_PahariEiJ_G0030981	Cirbp	73	67.901	Mus_pahari
ENSCAFG00020021344	-	90	67.901	MGP_SPRETEiJ_G0016386	Cirbp	73	67.901	Mus_spretus
ENSCAFG00020021344	-	100	97.778	MGP_SPRETEiJ_G0034063	Rbm3	100	97.778	Mus_spretus
ENSCAFG00020021344	-	82	93.243	ENSMPUG00000013632	RBM3	50	90.000	Mustela_putorius_furo
ENSCAFG00020021344	-	82	93.243	ENSNGAG00000012951	Rbm3	50	90.000	Nannospalax_galili
ENSCAFG00020021344	-	100	95.556	ENSNLEG00000028027	-	100	95.556	Nomascus_leucogenys
ENSCAFG00020021344	-	90	83.951	ENSNLEG00000019350	-	50	85.000	Nomascus_leucogenys
ENSCAFG00020021344	-	90	66.667	ENSNLEG00000028393	-	52	68.919	Nomascus_leucogenys
ENSCAFG00020021344	-	82	78.378	ENSNLEG00000031601	-	50	78.378	Nomascus_leucogenys
ENSCAFG00020021344	-	82	93.243	ENSODEG00000020479	-	50	90.000	Octodon_degus
ENSCAFG00020021344	-	100	73.404	ENSODEG00000019976	-	60	73.404	Octodon_degus
ENSCAFG00020021344	-	98	75.824	ENSODEG00000009372	-	91	75.824	Octodon_degus
ENSCAFG00020021344	-	82	91.892	ENSOGAG00000026654	RBM3	50	88.750	Otolemur_garnettii
ENSCAFG00020021344	-	100	95.556	ENSPPAG00000034179	RBM3	100	95.556	Pan_paniscus
ENSCAFG00020021344	-	82	71.622	ENSPPAG00000036405	-	64	71.622	Pan_paniscus
ENSCAFG00020021344	-	100	94.444	ENSPPRG00000013361	-	100	94.444	Panthera_pardus
ENSCAFG00020021344	-	80	90.278	ENSPPRG00000011438	-	62	90.278	Panthera_pardus
ENSCAFG00020021344	-	100	95.556	ENSPTRG00000021864	RBM3	100	95.556	Pan_troglodytes
ENSCAFG00020021344	-	82	71.622	ENSPTRG00000044048	-	64	71.622	Pan_troglodytes
ENSCAFG00020021344	-	91	86.585	ENSPANG00000010520	-	53	86.585	Papio_anubis
ENSCAFG00020021344	-	100	95.556	ENSPANG00000034727	-	100	95.556	Papio_anubis
ENSCAFG00020021344	-	91	86.585	ENSPANG00000005561	-	56	86.585	Papio_anubis
ENSCAFG00020021344	-	82	62.162	ENSPKIG00000024430	CIRBP	56	62.500	Paramormyrops_kingsleyae
ENSCAFG00020021344	-	82	93.243	ENSPEMG00000012411	Rbm3	50	90.000	Peromyscus_maniculatus_bairdii
ENSCAFG00020021344	-	100	95.556	ENSPPYG00000020314	RBM3	100	95.556	Pongo_abelii
ENSCAFG00020021344	-	99	60.417	ENSPPYG00000000510	-	99	60.417	Pongo_abelii
ENSCAFG00020021344	-	96	81.395	ENSPCOG00000013194	-	81	81.395	Propithecus_coquereli
ENSCAFG00020021344	-	98	81.818	ENSPCOG00000017170	-	100	81.818	Propithecus_coquereli
ENSCAFG00020021344	-	82	93.243	ENSPVAG00000015630	RBM3	50	90.000	Pteropus_vampyrus
ENSCAFG00020021344	-	82	93.243	ENSRNOG00000005387	Rbm3	50	90.000	Rattus_norvegicus
ENSCAFG00020021344	-	100	95.556	ENSRBIG00000040498	RBM3	100	95.556	Rhinopithecus_bieti
ENSCAFG00020021344	-	100	95.556	ENSRROG00000034767	RBM3	100	95.556	Rhinopithecus_roxellana
ENSCAFG00020021344	-	90	87.654	ENSSBOG00000005354	-	57	87.654	Saimiri_boliviensis_boliviensis
ENSCAFG00020021344	-	98	80.682	ENSSBOG00000020829	-	100	80.682	Saimiri_boliviensis_boliviensis
ENSCAFG00020021344	-	98	78.409	ENSSBOG00000035691	-	80	78.409	Saimiri_boliviensis_boliviensis
ENSCAFG00020021344	-	78	71.429	ENSSPUG00000000450	-	86	71.429	Sphenodon_punctatus
ENSCAFG00020021344	-	90	81.481	ENSSPUG00000000444	RBM3	60	73.333	Sphenodon_punctatus
ENSCAFG00020021344	-	90	66.667	ENSSSCG00000013427	CIRBP	56	69.333	Sus_scrofa
ENSCAFG00020021344	-	91	79.268	ENSSSCG00000005430	-	54	79.268	Sus_scrofa
ENSCAFG00020021344	-	100	96.667	ENSSSCG00000021591	-	100	96.667	Sus_scrofa
ENSCAFG00020021344	-	82	91.892	ENSTTRG00000008587	RBM3	50	88.750	Tursiops_truncatus
ENSCAFG00020021344	-	82	93.243	ENSUAMG00000013289	RBM3	50	90.000	Ursus_americanus
ENSCAFG00020021344	-	82	93.243	ENSUMAG00000007785	RBM3	50	90.000	Ursus_maritimus
ENSCAFG00020021344	-	97	81.609	ENSVVUG00000006737	-	97	81.609	Vulpes_vulpes
ENSCAFG00020021344	-	100	97.778	ENSVVUG00000017670	RBM3	100	97.778	Vulpes_vulpes