EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020021639 (Gene tree)
Gene ID: 112675041
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 419973 bases
Position: chrQKWQ01001282.1:19078579-19498551
Accession: 112675041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020027560	TUDOR	PF00567.24	7e-28	1	1
ENSCAFP00020027560	SNase	PF00565.17	5.9e-69	1	5
ENSCAFP00020027560	SNase	PF00565.17	5.9e-69	2	5
ENSCAFP00020027560	SNase	PF00565.17	5.9e-69	3	5
ENSCAFP00020027560	SNase	PF00565.17	5.9e-69	4	5
ENSCAFP00020027560	SNase	PF00565.17	5.9e-69	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020031818	SND1-201	2733	-	ENSCAFP00020027560	910 (aa)	XP_025327342	UPI00004BC065

Gene Model

Click here to download ENSCAFG00020021639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020021639's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020021639	SND1	100	99.011	ENSG00000197157	SND1	100	99.011	Homo_sapiens
ENSCAFG00020021639	SND1	100	83.991	ENSAPOG00000017599	snd1	100	83.991	Acanthochromis_polyacanthus
ENSCAFG00020021639	SND1	100	99.232	ENSAMEG00000004664	SND1	94	99.232	Ailuropoda_melanoleuca
ENSCAFG00020021639	SND1	98	82.195	ENSACIG00000003551	snd1	100	81.229	Amphilophus_citrinellus
ENSCAFG00020021639	SND1	100	83.772	ENSAOCG00000014166	snd1	100	83.772	Amphiprion_ocellaris
ENSCAFG00020021639	SND1	100	83.772	ENSAPEG00000007067	snd1	100	83.772	Amphiprion_percula
ENSCAFG00020021639	SND1	98	83.128	ENSATEG00000018475	snd1	89	83.128	Anabas_testudineus
ENSCAFG00020021639	SND1	100	99.231	ENSANAG00000034463	SND1	100	99.231	Aotus_nancymaae
ENSCAFG00020021639	SND1	100	83.443	ENSACLG00000022897	snd1	100	83.443	Astatotilapia_calliptera
ENSCAFG00020021639	SND1	99	84.268	ENSAMXG00000016318	snd1	99	84.268	Astyanax_mexicanus
ENSCAFG00020021639	SND1	100	98.791	ENSBTAG00000010692	SND1	100	98.791	Bos_taurus
ENSCAFG00020021639	SND1	98	46.601	WBGene00006626	tsn-1	98	46.762	Caenorhabditis_elegans
ENSCAFG00020021639	SND1	100	99.011	ENSCJAG00000017668	SND1	100	99.011	Callithrix_jacchus
ENSCAFG00020021639	SND1	100	100.000	ENSCAFG00000001700	SND1	100	100.000	Canis_familiaris
ENSCAFG00020021639	SND1	100	99.121	ENSCHIG00000023390	SND1	100	99.121	Capra_hircus
ENSCAFG00020021639	SND1	73	99.296	ENSTSYG00000004979	SND1	96	99.296	Carlito_syrichta
ENSCAFG00020021639	SND1	99	84.778	ENSCAPG00000010677	SND1	98	84.444	Cavia_aperea
ENSCAFG00020021639	SND1	100	98.022	ENSCPOG00000006251	SND1	100	98.022	Cavia_porcellus
ENSCAFG00020021639	SND1	100	99.341	ENSCCAG00000036847	SND1	100	99.341	Cebus_capucinus
ENSCAFG00020021639	SND1	100	99.231	ENSCATG00000035214	SND1	100	99.231	Cercocebus_atys
ENSCAFG00020021639	SND1	100	98.242	ENSCLAG00000011796	SND1	100	98.242	Chinchilla_lanigera
ENSCAFG00020021639	SND1	100	99.231	ENSCSAG00000010182	SND1	100	99.231	Chlorocebus_sabaeus
ENSCAFG00020021639	SND1	77	91.176	ENSCHOG00000002218	SND1	86	91.176	Choloepus_hoffmanni
ENSCAFG00020021639	SND1	100	92.198	ENSCPBG00000018094	SND1	100	92.198	Chrysemys_picta_bellii
ENSCAFG00020021639	SND1	98	57.032	ENSCING00000000524	-	99	55.917	Ciona_intestinalis
ENSCAFG00020021639	SND1	99	57.923	ENSCSAVG00000008807	-	99	57.486	Ciona_savignyi
ENSCAFG00020021639	SND1	100	99.231	ENSCANG00000035119	SND1	100	99.231	Colobus_angolensis_palliatus
ENSCAFG00020021639	SND1	100	97.253	ENSCGRG00001022514	Snd1	100	97.253	Cricetulus_griseus_chok1gshd
ENSCAFG00020021639	SND1	97	97.398	ENSCGRG00000012277	Snd1	99	97.398	Cricetulus_griseus_crigri
ENSCAFG00020021639	SND1	98	84.340	ENSCSEG00000008661	snd1	99	83.004	Cynoglossus_semilaevis
ENSCAFG00020021639	SND1	100	84.101	ENSCVAG00000010316	snd1	100	83.793	Cyprinodon_variegatus
ENSCAFG00020021639	SND1	100	84.447	ENSDARG00000006766	snd1	99	85.965	Danio_rerio
ENSCAFG00020021639	SND1	97	96.280	ENSDNOG00000006795	SND1	100	96.280	Dasypus_novemcinctus
ENSCAFG00020021639	SND1	100	98.681	ENSDORG00000000336	Snd1	100	98.681	Dipodomys_ordii
ENSCAFG00020021639	SND1	98	50.703	FBgn0035121	Tudor-SN	99	50.106	Drosophila_melanogaster
ENSCAFG00020021639	SND1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSCAFG00020021639	SND1	60	66.142	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSCAFG00020021639	SND1	100	97.624	ENSEASG00005008513	SND1	100	97.624	Equus_asinus_asinus
ENSCAFG00020021639	SND1	100	99.231	ENSECAG00000011451	SND1	100	99.231	Equus_caballus
ENSCAFG00020021639	SND1	100	87.253	ENSEEUG00000014737	SND1	100	87.253	Erinaceus_europaeus
ENSCAFG00020021639	SND1	99	82.346	ENSELUG00000001805	snd1	96	82.346	Esox_lucius
ENSCAFG00020021639	SND1	100	99.451	ENSFCAG00000008289	SND1	100	99.451	Felis_catus
ENSCAFG00020021639	SND1	100	98.352	ENSFDAG00000015881	SND1	100	98.352	Fukomys_damarensis
ENSCAFG00020021639	SND1	99	82.201	ENSFHEG00000004093	snd1	99	83.927	Fundulus_heteroclitus
ENSCAFG00020021639	SND1	64	74.859	ENSGMOG00000018932	snd1	66	74.859	Gadus_morhua
ENSCAFG00020021639	SND1	100	84.430	ENSGAFG00000008421	snd1	100	84.430	Gambusia_affinis
ENSCAFG00020021639	SND1	100	53.855	ENSGACG00000019793	snd1	100	53.855	Gasterosteus_aculeatus
ENSCAFG00020021639	SND1	100	99.231	ENSGGOG00000009614	SND1	100	99.231	Gorilla_gorilla
ENSCAFG00020021639	SND1	99	83.480	ENSHBUG00000019135	snd1	99	83.480	Haplochromis_burtoni
ENSCAFG00020021639	SND1	100	98.022	ENSHGLG00000003618	SND1	100	98.022	Heterocephalus_glaber_female
ENSCAFG00020021639	SND1	99	97.569	ENSHGLG00100012449	SND1	100	97.569	Heterocephalus_glaber_male
ENSCAFG00020021639	SND1	100	83.114	ENSHCOG00000005266	snd1	100	83.114	Hippocampus_comes
ENSCAFG00020021639	SND1	100	82.713	ENSIPUG00000013279	snd1	100	82.713	Ictalurus_punctatus
ENSCAFG00020021639	SND1	100	98.681	ENSSTOG00000002140	SND1	100	98.681	Ictidomys_tridecemlineatus
ENSCAFG00020021639	SND1	100	98.901	ENSJJAG00000009561	Snd1	100	98.901	Jaculus_jaculus
ENSCAFG00020021639	SND1	100	84.211	ENSKMAG00000016997	snd1	100	84.211	Kryptolebias_marmoratus
ENSCAFG00020021639	SND1	100	84.732	ENSLBEG00000013563	snd1	100	82.675	Labrus_bergylta
ENSCAFG00020021639	SND1	99	85.557	ENSLOCG00000015537	snd1	100	84.799	Lepisosteus_oculatus
ENSCAFG00020021639	SND1	100	98.352	ENSLAFG00000009696	SND1	100	98.352	Loxodonta_africana
ENSCAFG00020021639	SND1	100	99.231	ENSMFAG00000038114	SND1	100	99.231	Macaca_fascicularis
ENSCAFG00020021639	SND1	100	99.231	ENSMMUG00000015432	SND1	100	99.231	Macaca_mulatta
ENSCAFG00020021639	SND1	100	99.231	ENSMNEG00000039808	SND1	100	99.322	Macaca_nemestrina
ENSCAFG00020021639	SND1	100	99.341	ENSMLEG00000029040	SND1	100	99.435	Mandrillus_leucophaeus
ENSCAFG00020021639	SND1	100	83.553	ENSMAMG00000011739	snd1	100	83.553	Mastacembelus_armatus
ENSCAFG00020021639	SND1	100	83.443	ENSMZEG00005005681	snd1	100	83.443	Maylandia_zebra
ENSCAFG00020021639	SND1	100	99.011	ENSMICG00000000097	SND1	100	99.011	Microcebus_murinus
ENSCAFG00020021639	SND1	100	98.132	ENSMOCG00000005040	Snd1	100	98.132	Microtus_ochrogaster
ENSCAFG00020021639	SND1	100	83.553	ENSMMOG00000001795	snd1	100	83.553	Mola_mola
ENSCAFG00020021639	SND1	99	95.987	ENSMODG00000015182	SND1	100	95.934	Monodelphis_domestica
ENSCAFG00020021639	SND1	100	83.443	ENSMALG00000012071	snd1	100	83.443	Monopterus_albus
ENSCAFG00020021639	SND1	100	97.692	MGP_CAROLIEiJ_G0028159	Snd1	100	97.692	Mus_caroli
ENSCAFG00020021639	SND1	100	97.473	ENSMUSG00000001424	Snd1	100	97.473	Mus_musculus
ENSCAFG00020021639	SND1	100	97.692	MGP_PahariEiJ_G0021917	Snd1	100	98.145	Mus_pahari
ENSCAFG00020021639	SND1	100	97.692	MGP_SPRETEiJ_G0029159	Snd1	100	97.692	Mus_spretus
ENSCAFG00020021639	SND1	100	98.791	ENSMPUG00000006545	SND1	100	98.791	Mustela_putorius_furo
ENSCAFG00020021639	SND1	97	97.430	ENSMLUG00000017130	SND1	99	97.430	Myotis_lucifugus
ENSCAFG00020021639	SND1	100	98.022	ENSNGAG00000011186	Snd1	100	98.022	Nannospalax_galili
ENSCAFG00020021639	SND1	100	83.333	ENSNBRG00000006681	snd1	100	83.333	Neolamprologus_brichardi
ENSCAFG00020021639	SND1	100	99.121	ENSNLEG00000012263	SND1	100	99.322	Nomascus_leucogenys
ENSCAFG00020021639	SND1	91	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSCAFG00020021639	SND1	100	98.462	ENSODEG00000011502	SND1	100	98.462	Octodon_degus
ENSCAFG00020021639	SND1	100	83.333	ENSONIG00000011481	snd1	97	83.333	Oreochromis_niloticus
ENSCAFG00020021639	SND1	98	94.595	ENSOANG00000000817	SND1	99	93.392	Ornithorhynchus_anatinus
ENSCAFG00020021639	SND1	100	97.582	ENSOCUG00000001620	SND1	100	97.582	Oryctolagus_cuniculus
ENSCAFG00020021639	SND1	98	84.022	ENSORLG00000015201	snd1	100	83.004	Oryzias_latipes
ENSCAFG00020021639	SND1	98	84.134	ENSORLG00020013991	snd1	100	83.114	Oryzias_latipes_hni
ENSCAFG00020021639	SND1	98	84.134	ENSORLG00015012436	snd1	100	83.114	Oryzias_latipes_hsok
ENSCAFG00020021639	SND1	100	83.224	ENSOMEG00000006406	snd1	99	83.224	Oryzias_melastigma
ENSCAFG00020021639	SND1	100	98.794	ENSOGAG00000013356	SND1	94	98.794	Otolemur_garnettii
ENSCAFG00020021639	SND1	97	96.384	ENSOARG00000002149	SND1	100	96.384	Ovis_aries
ENSCAFG00020021639	SND1	100	99.121	ENSPPAG00000042947	SND1	100	99.121	Pan_paniscus
ENSCAFG00020021639	SND1	100	99.451	ENSPPRG00000004494	SND1	100	99.451	Panthera_pardus
ENSCAFG00020021639	SND1	100	99.341	ENSPTIG00000014214	SND1	100	99.341	Panthera_tigris_altaica
ENSCAFG00020021639	SND1	100	99.121	ENSPTRG00000023911	SND1	100	99.121	Pan_troglodytes
ENSCAFG00020021639	SND1	97	99.321	ENSPANG00000011997	SND1	99	99.321	Papio_anubis
ENSCAFG00020021639	SND1	99	81.588	ENSPKIG00000023494	snd1	100	80.849	Paramormyrops_kingsleyae
ENSCAFG00020021639	SND1	92	83.114	ENSPMGG00000003629	snd1	100	83.114	Periophthalmus_magnuspinnatus
ENSCAFG00020021639	SND1	100	98.022	ENSPEMG00000010240	Snd1	100	98.022	Peromyscus_maniculatus_bairdii
ENSCAFG00020021639	SND1	97	73.672	ENSPMAG00000007915	-	99	73.446	Petromyzon_marinus
ENSCAFG00020021639	SND1	100	96.374	ENSPCIG00000011561	SND1	100	96.374	Phascolarctos_cinereus
ENSCAFG00020021639	SND1	100	83.882	ENSPFOG00000001557	snd1	100	83.882	Poecilia_formosa
ENSCAFG00020021639	SND1	100	83.882	ENSPLAG00000018459	snd1	97	83.882	Poecilia_latipinna
ENSCAFG00020021639	SND1	100	84.320	ENSPMEG00000006803	snd1	100	84.320	Poecilia_mexicana
ENSCAFG00020021639	SND1	100	84.211	ENSPREG00000002189	snd1	100	84.211	Poecilia_reticulata
ENSCAFG00020021639	SND1	93	99.256	ENSPPYG00000017972	SND1	100	99.256	Pongo_abelii
ENSCAFG00020021639	SND1	100	86.703	ENSPCAG00000011305	SND1	100	86.703	Procavia_capensis
ENSCAFG00020021639	SND1	100	99.011	ENSPCOG00000026791	SND1	100	99.096	Propithecus_coquereli
ENSCAFG00020021639	SND1	100	97.143	ENSPVAG00000013945	SND1	100	97.143	Pteropus_vampyrus
ENSCAFG00020021639	SND1	100	83.443	ENSPNYG00000000932	snd1	100	83.443	Pundamilia_nyererei
ENSCAFG00020021639	SND1	100	83.479	ENSPNAG00000001206	snd1	100	83.479	Pygocentrus_nattereri
ENSCAFG00020021639	SND1	99	97.357	ENSRNOG00000031173	Snd1	99	97.357	Rattus_norvegicus
ENSCAFG00020021639	SND1	73	99.436	ENSRBIG00000027782	-	93	99.620	Rhinopithecus_bieti
ENSCAFG00020021639	SND1	100	99.231	ENSRROG00000033020	SND1	100	99.231	Rhinopithecus_roxellana
ENSCAFG00020021639	SND1	100	99.231	ENSSBOG00000032461	SND1	100	99.231	Saimiri_boliviensis_boliviensis
ENSCAFG00020021639	SND1	98	93.018	ENSSHAG00000015359	SND1	100	93.018	Sarcophilus_harrisii
ENSCAFG00020021639	SND1	100	82.481	ENSSFOG00015001103	snd1	100	82.481	Scleropages_formosus
ENSCAFG00020021639	SND1	98	83.781	ENSSMAG00000001932	snd1	95	82.675	Scophthalmus_maximus
ENSCAFG00020021639	SND1	100	83.772	ENSSDUG00000002699	snd1	94	83.772	Seriola_dumerili
ENSCAFG00020021639	SND1	100	76.535	ENSSLDG00000001950	snd1	100	76.535	Seriola_lalandi_dorsalis
ENSCAFG00020021639	SND1	86	99.057	ENSSARG00000004877	SND1	92	99.057	Sorex_araneus
ENSCAFG00020021639	SND1	73	87.652	ENSSPUG00000017586	SND1	96	87.652	Sphenodon_punctatus
ENSCAFG00020021639	SND1	73	84.941	ENSSPAG00000021398	snd1	99	84.941	Stegastes_partitus
ENSCAFG00020021639	SND1	100	98.901	ENSSSCG00000016590	SND1	100	98.901	Sus_scrofa
ENSCAFG00020021639	SND1	100	82.785	ENSTRUG00000014067	snd1	100	82.785	Takifugu_rubripes
ENSCAFG00020021639	SND1	100	83.333	ENSTNIG00000011019	snd1	98	85.595	Tetraodon_nigroviridis
ENSCAFG00020021639	SND1	93	93.278	ENSTBEG00000003999	SND1	100	93.278	Tupaia_belangeri
ENSCAFG00020021639	SND1	100	94.615	ENSTTRG00000006059	SND1	100	94.615	Tursiops_truncatus
ENSCAFG00020021639	SND1	71	90.649	ENSUAMG00000002820	-	90	90.649	Ursus_americanus
ENSCAFG00020021639	SND1	91	99.620	ENSUAMG00000005604	-	93	99.620	Ursus_americanus
ENSCAFG00020021639	SND1	100	99.451	ENSUMAG00000005960	SND1	100	99.451	Ursus_maritimus
ENSCAFG00020021639	SND1	77	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSCAFG00020021639	SND1	100	99.780	ENSVVUG00000007226	SND1	100	99.780	Vulpes_vulpes
ENSCAFG00020021639	SND1	97	84.859	ENSXETG00000023043	snd1	100	84.783	Xenopus_tropicalis
ENSCAFG00020021639	SND1	92	81.591	ENSXCOG00000013629	snd1	99	81.591	Xiphophorus_couchianus
ENSCAFG00020021639	SND1	100	84.430	ENSXMAG00000011469	snd1	100	84.430	Xiphophorus_maculatus