EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00020022150 (Gene tree)
Gene ID
112674221
Gene Symbol
LSM14B
Alias
C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name
LSM family member 14B
Gene Type
protein_coding
Species
Canis_lupus_dingo
Status
putative
Strand
Plus strand
Length
11422 bases
Position
chrQKWQ01002044.1:46435888-46447309
Accession
112674221
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00020028259FDFPF09532.101.4e-2411
ENSCAFP00020028260FDFPF09532.102.5e-2411
ENSCAFP00020028258FDFPF09532.103e-2411
ENSCAFP00020028259SM-ATXPF14438.67.2e-0811
ENSCAFP00020028260SM-ATXPF14438.67.4e-0811
ENSCAFP00020028258SM-ATXPF14438.67.7e-0811
ENSCAFP00020028260LSM14PF12701.79e-3111
ENSCAFP00020028259LSM14PF12701.79.6e-3111
ENSCAFP00020028258LSM14PF12701.71e-3011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00020032612LSM14B-2032443-ENSCAFP00020028260385 (aa)XP_025326386UPI000DC67251
ENSCAFT00020032610LSM14B-2012560-ENSCAFP00020028258424 (aa)XP_025326383UPI000DC674C7
ENSCAFT00020032611LSM14B-2022482-ENSCAFP00020028259398 (aa)--
Gene Model
Click here to download ENSCAFG00020022150's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020022150's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00020022150LSM14B9250.115ENSCAFG00020019624LSM14A8651.106
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00020022150LSM14B10094.286ENSG00000149657LSM14B10094.286Homo_sapiens
ENSCAFG00020022150LSM14B5136.275ENSAPOG00000010003-8034.884Acanthochromis_polyacanthus
ENSCAFG00020022150LSM14B9055.556ENSAPOG00000001780lsm14b9255.890Acanthochromis_polyacanthus
ENSCAFG00020022150LSM14B9997.163ENSAMEG00000013430LSM14B10097.163Ailuropoda_melanoleuca
ENSCAFG00020022150LSM14B6242.324ENSACIG00000003147LSM14B8841.176Amphilophus_citrinellus
ENSCAFG00020022150LSM14B9053.409ENSACIG00000012266lsm14b9150.681Amphilophus_citrinellus
ENSCAFG00020022150LSM14B9948.731ENSAOCG00000006667LSM14B9049.580Amphiprion_ocellaris
ENSCAFG00020022150LSM14B9055.833ENSAOCG00000012380lsm14b9256.164Amphiprion_ocellaris
ENSCAFG00020022150LSM14B9052.542ENSAPEG00000023633lsm14b9250.411Amphiprion_percula
ENSCAFG00020022150LSM14B9054.190ENSATEG00000016603lsm14b9254.545Anabas_testudineus
ENSCAFG00020022150LSM14B7139.542ENSATEG00000015895LSM14B8342.701Anabas_testudineus
ENSCAFG00020022150LSM14B9284.694ENSAPLG00000013203LSM14B10084.694Anas_platyrhynchos
ENSCAFG00020022150LSM14B9981.299ENSACAG00000016195LSM14B9981.299Anolis_carolinensis
ENSCAFG00020022150LSM14B10093.506ENSANAG00000037915LSM14B10093.506Aotus_nancymaae
ENSCAFG00020022150LSM14B8950.275ENSACLG00000019663lsm14b9253.867Astatotilapia_calliptera
ENSCAFG00020022150LSM14B9961.905ENSAMXG00000002865lsm14b9961.750Astyanax_mexicanus
ENSCAFG00020022150LSM14B10094.811ENSBTAG00000021558LSM14B10094.811Bos_taurus
ENSCAFG00020022150LSM14B10093.506ENSCJAG00000014434LSM14B10093.506Callithrix_jacchus
ENSCAFG00020022150LSM14B9199.740ENSCAFG00000012518LSM14B9899.740Canis_familiaris
ENSCAFG00020022150LSM14B10095.755ENSCHIG00000010284-10095.755Capra_hircus
ENSCAFG00020022150LSM14B9968.684ENSCHIG00000022681-10068.684Capra_hircus
ENSCAFG00020022150LSM14B8992.105ENSTSYG00000031914LSM14B8992.105Carlito_syrichta
ENSCAFG00020022150LSM14B8992.128ENSCAPG00000013059LSM14B10092.128Cavia_aperea
ENSCAFG00020022150LSM14B8992.398ENSCPOG00000038080LSM14B10092.398Cavia_porcellus
ENSCAFG00020022150LSM14B10093.506ENSCCAG00000021267LSM14B10093.506Cebus_capucinus
ENSCAFG00020022150LSM14B10069.340ENSCCAG00000024900-9975.974Cebus_capucinus
ENSCAFG00020022150LSM14B10093.766ENSCATG00000036006LSM14B10093.766Cercocebus_atys
ENSCAFG00020022150LSM14B8992.690ENSCLAG00000003186LSM14B10092.690Chinchilla_lanigera
ENSCAFG00020022150LSM14B10093.632ENSCSAG00000015729LSM14B10093.632Chlorocebus_sabaeus
ENSCAFG00020022150LSM14B6971.739ENSCHOG00000006997-10072.826Choloepus_hoffmanni
ENSCAFG00020022150LSM14B9986.525ENSCPBG00000027065LSM14B9986.525Chrysemys_picta_bellii
ENSCAFG00020022150LSM14B8994.152ENSCANG00000036986LSM14B10094.152Colobus_angolensis_palliatus
ENSCAFG00020022150LSM14B10092.468ENSCGRG00001018399Lsm14b10092.468Cricetulus_griseus_chok1gshd
ENSCAFG00020022150LSM14B5590.323ENSCGRG00000002484-10090.323Cricetulus_griseus_crigri
ENSCAFG00020022150LSM14B7090.268ENSCGRG00000006111-10090.268Cricetulus_griseus_crigri
ENSCAFG00020022150LSM14B9548.052ENSCSEG00000020669LSM14B9247.154Cynoglossus_semilaevis
ENSCAFG00020022150LSM14B9151.507ENSCSEG00000004722lsm14b9352.432Cynoglossus_semilaevis
ENSCAFG00020022150LSM14B6537.500ENSCVAG00000012433-8835.983Cyprinodon_variegatus
ENSCAFG00020022150LSM14B9955.612ENSDARG00000025386lsm14b9955.867Danio_rerio
ENSCAFG00020022150LSM14B7290.164ENSDNOG00000025246LSM14B10090.164Dasypus_novemcinctus
ENSCAFG00020022150LSM14B9089.855ENSDORG00000016683Lsm14b10088.852Dipodomys_ordii
ENSCAFG00020022150LSM14B5786.425ENSETEG00000011188-9686.425Echinops_telfairi
ENSCAFG00020022150LSM14B9975.844ENSETEG00000001869-10074.545Echinops_telfairi
ENSCAFG00020022150LSM14B7294.754ENSEASG00005023218LSM14B10094.982Equus_asinus_asinus
ENSCAFG00020022150LSM14B10096.462ENSECAG00000010659LSM14B10096.462Equus_caballus
ENSCAFG00020022150LSM14B5497.980ENSEEUG00000007331LSM14B8097.980Erinaceus_europaeus
ENSCAFG00020022150LSM14B9659.947ENSELUG00000005780lsm14b9260.784Esox_lucius
ENSCAFG00020022150LSM14B9053.782ENSELUG00000016299LSM14B9954.220Esox_lucius
ENSCAFG00020022150LSM14B10097.662ENSFCAG00000003248LSM14B10097.662Felis_catus
ENSCAFG00020022150LSM14B9185.788ENSFALG00000010618LSM14B10085.788Ficedula_albicollis
ENSCAFG00020022150LSM14B8992.105ENSFDAG00000002214LSM14B10092.105Fukomys_damarensis
ENSCAFG00020022150LSM14B7442.765ENSFHEG00000003362LSM14B7646.358Fundulus_heteroclitus
ENSCAFG00020022150LSM14B10049.254ENSFHEG00000006237lsm14b10049.749Fundulus_heteroclitus
ENSCAFG00020022150LSM14B10049.875ENSGMOG00000017115lsm14b9948.878Gadus_morhua
ENSCAFG00020022150LSM14B9985.246ENSGALG00000005125LSM14B9986.183Gallus_gallus
ENSCAFG00020022150LSM14B6643.307ENSGAFG00000013723LSM14B8741.453Gambusia_affinis
ENSCAFG00020022150LSM14B6969.930ENSGAFG00000020318lsm14b7569.930Gambusia_affinis
ENSCAFG00020022150LSM14B9154.670ENSGACG00000009973lsm14b9254.670Gasterosteus_aculeatus
ENSCAFG00020022150LSM14B6381.224ENSGAGG00000004106LSM14B9977.992Gopherus_agassizii
ENSCAFG00020022150LSM14B9092.241ENSGGOG00000005630LSM14B10092.131Gorilla_gorilla
ENSCAFG00020022150LSM14B10093.247ENSHGLG00000015055LSM14B10093.247Heterocephalus_glaber_female
ENSCAFG00020022150LSM14B8990.351ENSHGLG00100015273LSM14B10091.391Heterocephalus_glaber_male
ENSCAFG00020022150LSM14B9553.175ENSHCOG00000018747LSM14B9252.778Hippocampus_comes
ENSCAFG00020022150LSM14B5943.043ENSHCOG00000004867lsm14b8642.128Hippocampus_comes
ENSCAFG00020022150LSM14B9062.040ENSIPUG00000014946lsm14b9555.478Ictalurus_punctatus
ENSCAFG00020022150LSM14B8993.860ENSSTOG00000020482LSM14B10093.860Ictidomys_tridecemlineatus
ENSCAFG00020022150LSM14B9991.842ENSJJAG00000012728Lsm14b9991.842Jaculus_jaculus
ENSCAFG00020022150LSM14B9052.617ENSKMAG00000017524lsm14b9352.846Kryptolebias_marmoratus
ENSCAFG00020022150LSM14B5245.238ENSKMAG00000012834-8845.455Kryptolebias_marmoratus
ENSCAFG00020022150LSM14B6942.105ENSLBEG00000007951LSM14B8642.308Labrus_bergylta
ENSCAFG00020022150LSM14B9988.489ENSLACG00000003849LSM14B9971.529Latimeria_chalumnae
ENSCAFG00020022150LSM14B9963.683ENSLOCG00000003746lsm14b9963.683Lepisosteus_oculatus
ENSCAFG00020022150LSM14B9091.040ENSLAFG00000007492LSM14B10091.040Loxodonta_africana
ENSCAFG00020022150LSM14B10094.286ENSMFAG00000041479LSM14B10094.286Macaca_fascicularis
ENSCAFG00020022150LSM14B10094.286ENSMMUG00000014084LSM14B10094.286Macaca_mulatta
ENSCAFG00020022150LSM14B10094.286ENSMNEG00000045573LSM14B10094.286Macaca_nemestrina
ENSCAFG00020022150LSM14B8992.982ENSMLEG00000040895LSM14B10092.982Mandrillus_leucophaeus
ENSCAFG00020022150LSM14B9950.386ENSMAMG00000024124LSM14B9150.838Mastacembelus_armatus
ENSCAFG00020022150LSM14B9052.210ENSMAMG00000020539lsm14b9253.406Mastacembelus_armatus
ENSCAFG00020022150LSM14B8952.394ENSMZEG00005000987lsm14b9254.144Maylandia_zebra
ENSCAFG00020022150LSM14B9148.525ENSMZEG00005026001LSM14B9450.273Maylandia_zebra
ENSCAFG00020022150LSM14B9180.618ENSMGAG00000005300LSM14B10081.742Meleagris_gallopavo
ENSCAFG00020022150LSM14B10091.429ENSMAUG00000020700Lsm14b10091.429Mesocricetus_auratus
ENSCAFG00020022150LSM14B10093.766ENSMICG00000014675LSM14B10093.766Microcebus_murinus
ENSCAFG00020022150LSM14B6576.000ENSMOCG00000005119-9375.824Microtus_ochrogaster
ENSCAFG00020022150LSM14B10091.429ENSMOCG00000020600Lsm14b10091.429Microtus_ochrogaster
ENSCAFG00020022150LSM14B9053.955ENSMMOG00000020042lsm14b9554.318Mola_mola
ENSCAFG00020022150LSM14B9150.279ENSMMOG00000017321LSM14B9149.861Mola_mola
ENSCAFG00020022150LSM14B7287.213ENSMODG00000016690LSM14B10087.213Monodelphis_domestica
ENSCAFG00020022150LSM14B9453.297ENSMALG00000004783lsm14b9252.422Monopterus_albus
ENSCAFG00020022150LSM14B9249.727ENSMALG00000022251LSM14B9249.311Monopterus_albus
ENSCAFG00020022150LSM14B10091.745MGP_CAROLIEiJ_G0024770Lsm14b10091.745Mus_caroli
ENSCAFG00020022150LSM14B10091.948ENSMUSG00000039108Lsm14b10091.948Mus_musculus
ENSCAFG00020022150LSM14B10091.981MGP_PahariEiJ_G0026214Lsm14b10091.981Mus_pahari
ENSCAFG00020022150LSM14B10091.981MGP_SPRETEiJ_G0025693Lsm14b10091.981Mus_spretus
ENSCAFG00020022150LSM14B9592.060ENSMPUG00000007584LSM14B10091.811Mustela_putorius_furo
ENSCAFG00020022150LSM14B10093.782ENSMLUG00000000304LSM14B10093.523Myotis_lucifugus
ENSCAFG00020022150LSM14B6087.013ENSNGAG00000016550Lsm14b10087.013Nannospalax_galili
ENSCAFG00020022150LSM14B8992.982ENSNLEG00000015757LSM14B10092.982Nomascus_leucogenys
ENSCAFG00020022150LSM14B6465.882ENSMEUG00000006305-8584.971Notamacropus_eugenii
ENSCAFG00020022150LSM14B7797.887ENSMEUG00000008267-8097.945Notamacropus_eugenii
ENSCAFG00020022150LSM14B5095.000ENSOPRG00000000447-6195.000Ochotona_princeps
ENSCAFG00020022150LSM14B10094.026ENSODEG00000004099LSM14B10094.026Octodon_degus
ENSCAFG00020022150LSM14B8953.239ENSONIG00000020318lsm14b9255.801Oreochromis_niloticus
ENSCAFG00020022150LSM14B7282.623ENSOANG00000003370LSM14B9982.623Ornithorhynchus_anatinus
ENSCAFG00020022150LSM14B8988.953ENSOCUG00000006279LSM14B10088.953Oryctolagus_cuniculus
ENSCAFG00020022150LSM14B9245.676ENSORLG00000028353LSM14B9144.972Oryzias_latipes
ENSCAFG00020022150LSM14B9050.411ENSORLG00000013525lsm14b9252.174Oryzias_latipes
ENSCAFG00020022150LSM14B6634.507ENSORLG00020018191-8537.600Oryzias_latipes_hni
ENSCAFG00020022150LSM14B9049.589ENSORLG00020020553lsm14b9251.902Oryzias_latipes_hni
ENSCAFG00020022150LSM14B9049.589ENSORLG00015016862lsm14b9251.902Oryzias_latipes_hsok
ENSCAFG00020022150LSM14B9246.113ENSORLG00015013157LSM14B9144.904Oryzias_latipes_hsok
ENSCAFG00020022150LSM14B9049.046ENSOMEG00000023917lsm14b9251.613Oryzias_melastigma
ENSCAFG00020022150LSM14B6537.692ENSOMEG00000000171-9740.698Oryzias_melastigma
ENSCAFG00020022150LSM14B10093.396ENSOGAG00000003915LSM14B10093.396Otolemur_garnettii
ENSCAFG00020022150LSM14B9293.573ENSOARG00000014706LSM14B9895.026Ovis_aries
ENSCAFG00020022150LSM14B9092.241ENSPPAG00000035799LSM14B9592.241Pan_paniscus
ENSCAFG00020022150LSM14B10097.403ENSPPRG00000009197LSM14B10097.403Panthera_pardus
ENSCAFG00020022150LSM14B7096.284ENSPTIG00000021518LSM14B10096.284Panthera_tigris_altaica
ENSCAFG00020022150LSM14B10094.286ENSPTRG00000013696LSM14B10094.286Pan_troglodytes
ENSCAFG00020022150LSM14B10094.026ENSPANG00000011747LSM14B10094.026Papio_anubis
ENSCAFG00020022150LSM14B9962.402ENSPKIG00000003275lsm14b8787.234Paramormyrops_kingsleyae
ENSCAFG00020022150LSM14B9084.438ENSPSIG00000014762LSM14B10084.438Pelodiscus_sinensis
ENSCAFG00020022150LSM14B9992.388ENSPEMG00000017688Lsm14b10092.388Peromyscus_maniculatus_bairdii
ENSCAFG00020022150LSM14B10089.870ENSPCIG00000013405LSM14B10089.870Phascolarctos_cinereus
ENSCAFG00020022150LSM14B10051.870ENSPFOG00000005631lsm14b9252.033Poecilia_formosa
ENSCAFG00020022150LSM14B10051.880ENSPLAG00000002449lsm14b9252.044Poecilia_latipinna
ENSCAFG00020022150LSM14B9048.870ENSPLAG00000005793LSM14B9148.883Poecilia_latipinna
ENSCAFG00020022150LSM14B10050.623ENSPMEG00000000745lsm14b9251.499Poecilia_mexicana
ENSCAFG00020022150LSM14B8948.571ENSPMEG00000022953LSM14B9148.459Poecilia_mexicana
ENSCAFG00020022150LSM14B6538.351ENSPREG00000007828LSM14B8739.370Poecilia_reticulata
ENSCAFG00020022150LSM14B10082.836ENSPPYG00000011194LSM14B10082.836Pongo_abelii
ENSCAFG00020022150LSM14B10094.026ENSPCOG00000013625LSM14B10094.026Propithecus_coquereli
ENSCAFG00020022150LSM14B8178.086ENSPVAG00000017918LSM14B10078.193Pteropus_vampyrus
ENSCAFG00020022150LSM14B9962.916ENSPNAG00000012777lsm14b9962.660Pygocentrus_nattereri
ENSCAFG00020022150LSM14B10092.217ENSRNOG00000054557Lsm14b10092.217Rattus_norvegicus
ENSCAFG00020022150LSM14B9093.194ENSRBIG00000033461LSM14B9993.586Rhinopithecus_bieti
ENSCAFG00020022150LSM14B9194.269ENSRROG00000042949LSM14B10092.787Rhinopithecus_roxellana
ENSCAFG00020022150LSM14B8992.982ENSSBOG00000032820LSM14B10092.982Saimiri_boliviensis_boliviensis
ENSCAFG00020022150LSM14B9088.696ENSSHAG00000015528LSM14B10087.213Sarcophilus_harrisii
ENSCAFG00020022150LSM14B9061.064ENSSFOG00015004627lsm14b9261.944Scleropages_formosus
ENSCAFG00020022150LSM14B9752.865ENSSMAG00000000135LSM14B9252.603Scophthalmus_maximus
ENSCAFG00020022150LSM14B9055.525ENSSMAG00000012725lsm14b9255.586Scophthalmus_maximus
ENSCAFG00020022150LSM14B9053.476ENSSDUG00000020977lsm14b9254.447Seriola_dumerili
ENSCAFG00020022150LSM14B9253.151ENSSDUG00000022770LSM14B9253.444Seriola_dumerili
ENSCAFG00020022150LSM14B6241.473ENSSLDG00000011354-8944.314Seriola_lalandi_dorsalis
ENSCAFG00020022150LSM14B5383.575ENSSARG00000007749-10083.575Sorex_araneus
ENSCAFG00020022150LSM14B9985.142ENSSPUG00000014360LSM14B9985.142Sphenodon_punctatus
ENSCAFG00020022150LSM14B9055.014ENSSPAG00000020915lsm14b9255.085Stegastes_partitus
ENSCAFG00020022150LSM14B6541.288ENSSPAG00000018854-8839.919Stegastes_partitus
ENSCAFG00020022150LSM14B10092.217ENSSSCG00000026052LSM14B10089.508Sus_scrofa
ENSCAFG00020022150LSM14B9084.483ENSTGUG00000007884LSM14B10084.483Taeniopygia_guttata
ENSCAFG00020022150LSM14B10052.250ENSTRUG00000011354lsm14b10051.500Takifugu_rubripes
ENSCAFG00020022150LSM14B9250.272ENSTRUG00000001529LSM14B9250.000Takifugu_rubripes
ENSCAFG00020022150LSM14B9254.596ENSTNIG00000002445lsm14b9254.372Tetraodon_nigroviridis
ENSCAFG00020022150LSM14B85100.000ENSTTRG00000011043LSM14B83100.000Tursiops_truncatus
ENSCAFG00020022150LSM14B9892.308ENSUAMG00000025298LSM14B9992.308Ursus_americanus
ENSCAFG00020022150LSM14B9892.308ENSUMAG00000000480LSM14B9992.308Ursus_maritimus
ENSCAFG00020022150LSM14B9098.551ENSVVUG00000015920LSM14B10099.016Vulpes_vulpes
ENSCAFG00020022150LSM14B8674.387ENSXETG00000001997lsm14b9976.453Xenopus_tropicalis
ENSCAFG00020022150LSM14B9048.913ENSXMAG00000010013lsm14b9249.330Xiphophorus_maculatus

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