EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020022637 (Gene tree)
Gene ID: 112649771
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 17868 bases
Position: chrQKWQ01002178.1:58525978-58543845
Accession: 112649771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020029102	PRP4	PF08799.11	5.7e-14	1	1
ENSCAFP00020029113	PRP4	PF08799.11	5.7e-14	1	1
ENSCAFP00020029120	PRP4	PF08799.11	5.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020033585	PRPF4-202	1566	-	ENSCAFP00020029113	521 (aa)	XP_025287974	UPI00005A2588
ENSCAFT00020033599	PRPF4-203	1584	-	ENSCAFP00020029120	527 (aa)	-	-
ENSCAFT00020033573	PRPF4-201	1560	-	ENSCAFP00020029102	519 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020022637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020022637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020022637	PRPF4	56	30.000	ENSCAFG00020022379	POC1A	72	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020022637	PRPF4	100	99.424	ENSG00000136875	PRPF4	100	99.424	Homo_sapiens
ENSCAFG00020022637	PRPF4	97	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSCAFG00020022637	PRPF4	100	99.616	ENSAMEG00000013048	PRPF4	98	99.616	Ailuropoda_melanoleuca
ENSCAFG00020022637	PRPF4	97	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSCAFG00020022637	PRPF4	97	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSCAFG00020022637	PRPF4	97	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSCAFG00020022637	PRPF4	97	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSCAFG00020022637	PRPF4	99	90.625	ENSAPLG00000006534	PRPF4	96	90.625	Anas_platyrhynchos
ENSCAFG00020022637	PRPF4	100	89.866	ENSACAG00000015110	PRPF4	100	89.866	Anolis_carolinensis
ENSCAFG00020022637	PRPF4	100	99.808	ENSANAG00000022464	PRPF4	96	99.808	Aotus_nancymaae
ENSCAFG00020022637	PRPF4	97	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSCAFG00020022637	PRPF4	97	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSCAFG00020022637	PRPF4	100	98.848	ENSBTAG00000004571	PRPF4	100	98.848	Bos_taurus
ENSCAFG00020022637	PRPF4	91	44.000	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSCAFG00020022637	PRPF4	100	99.617	ENSCJAG00000017856	PRPF4	100	99.617	Callithrix_jacchus
ENSCAFG00020022637	PRPF4	100	100.000	ENSCAFG00000003224	PRPF4	97	100.000	Canis_familiaris
ENSCAFG00020022637	PRPF4	100	99.042	ENSCHIG00000024648	-	100	99.042	Capra_hircus
ENSCAFG00020022637	PRPF4	100	99.424	ENSTSYG00000010366	PRPF4	100	99.424	Carlito_syrichta
ENSCAFG00020022637	PRPF4	87	89.781	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSCAFG00020022637	PRPF4	100	99.040	ENSCPOG00000010747	-	100	99.040	Cavia_porcellus
ENSCAFG00020022637	PRPF4	100	92.514	ENSCPOG00000014729	-	100	92.514	Cavia_porcellus
ENSCAFG00020022637	PRPF4	100	99.616	ENSCCAG00000028990	PRPF4	100	99.616	Cebus_capucinus
ENSCAFG00020022637	PRPF4	100	99.424	ENSCATG00000021552	PRPF4	100	99.424	Cercocebus_atys
ENSCAFG00020022637	PRPF4	100	99.232	ENSCLAG00000013448	PRPF4	100	99.232	Chinchilla_lanigera
ENSCAFG00020022637	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSCAFG00020022637	PRPF4	99	91.797	ENSCPBG00000019136	PRPF4	74	91.797	Chrysemys_picta_bellii
ENSCAFG00020022637	PRPF4	97	59.252	ENSCING00000001299	-	97	58.614	Ciona_intestinalis
ENSCAFG00020022637	PRPF4	96	57.540	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSCAFG00020022637	PRPF4	100	99.616	ENSCANG00000003246	PRPF4	100	99.616	Colobus_angolensis_palliatus
ENSCAFG00020022637	PRPF4	100	99.424	ENSCGRG00001016992	Prpf4	100	99.424	Cricetulus_griseus_chok1gshd
ENSCAFG00020022637	PRPF4	100	99.424	ENSCGRG00000017560	Prpf4	100	99.424	Cricetulus_griseus_crigri
ENSCAFG00020022637	PRPF4	97	75.842	ENSCSEG00000020451	prpf4	99	75.842	Cynoglossus_semilaevis
ENSCAFG00020022637	PRPF4	97	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSCAFG00020022637	PRPF4	100	99.042	ENSDNOG00000013203	PRPF4	100	99.042	Dasypus_novemcinctus
ENSCAFG00020022637	PRPF4	100	99.424	ENSDORG00000026275	Prpf4	100	99.424	Dipodomys_ordii
ENSCAFG00020022637	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSCAFG00020022637	PRPF4	100	97.323	ENSETEG00000020389	PRPF4	100	97.323	Echinops_telfairi
ENSCAFG00020022637	PRPF4	96	73.041	ENSEBUG00000015229	prpf4	86	73.502	Eptatretus_burgeri
ENSCAFG00020022637	PRPF4	100	99.808	ENSEASG00005022678	PRPF4	100	99.808	Equus_asinus_asinus
ENSCAFG00020022637	PRPF4	100	99.808	ENSECAG00000007072	PRPF4	100	99.808	Equus_caballus
ENSCAFG00020022637	PRPF4	100	78.384	ENSEEUG00000007480	PRPF4	100	78.384	Erinaceus_europaeus
ENSCAFG00020022637	PRPF4	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSCAFG00020022637	PRPF4	100	99.617	ENSFCAG00000005514	PRPF4	100	99.617	Felis_catus
ENSCAFG00020022637	PRPF4	98	88.341	ENSFALG00000005423	PRPF4	90	85.591	Ficedula_albicollis
ENSCAFG00020022637	PRPF4	100	99.040	ENSFDAG00000005839	PRPF4	100	99.040	Fukomys_damarensis
ENSCAFG00020022637	PRPF4	97	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSCAFG00020022637	PRPF4	98	90.215	ENSGALG00000008857	PRPF4	96	89.535	Gallus_gallus
ENSCAFG00020022637	PRPF4	65	71.176	ENSGAFG00000012164	prpf4	70	71.176	Gambusia_affinis
ENSCAFG00020022637	PRPF4	97	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSCAFG00020022637	PRPF4	99	91.602	ENSGAGG00000025029	PRPF4	95	91.602	Gopherus_agassizii
ENSCAFG00020022637	PRPF4	100	99.424	ENSGGOG00000006943	PRPF4	100	99.424	Gorilla_gorilla
ENSCAFG00020022637	PRPF4	97	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSCAFG00020022637	PRPF4	100	81.836	ENSHGLG00000016628	-	100	82.600	Heterocephalus_glaber_female
ENSCAFG00020022637	PRPF4	100	99.040	ENSHGLG00000015191	PRPF4	100	99.040	Heterocephalus_glaber_female
ENSCAFG00020022637	PRPF4	100	80.422	ENSHGLG00000003838	-	100	80.422	Heterocephalus_glaber_female
ENSCAFG00020022637	PRPF4	100	80.422	ENSHGLG00100005571	-	100	80.422	Heterocephalus_glaber_male
ENSCAFG00020022637	PRPF4	97	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSCAFG00020022637	PRPF4	100	99.232	ENSSTOG00000027833	PRPF4	100	99.232	Ictidomys_tridecemlineatus
ENSCAFG00020022637	PRPF4	100	99.424	ENSJJAG00000008838	Prpf4	100	99.424	Jaculus_jaculus
ENSCAFG00020022637	PRPF4	97	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSCAFG00020022637	PRPF4	97	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSCAFG00020022637	PRPF4	99	80.347	ENSLACG00000016317	PRPF4	99	80.347	Latimeria_chalumnae
ENSCAFG00020022637	PRPF4	97	81.782	ENSLOCG00000000581	prpf4	99	81.782	Lepisosteus_oculatus
ENSCAFG00020022637	PRPF4	100	99.042	ENSLAFG00000018225	PRPF4	100	99.042	Loxodonta_africana
ENSCAFG00020022637	PRPF4	100	99.232	ENSMFAG00000039397	PRPF4	100	99.232	Macaca_fascicularis
ENSCAFG00020022637	PRPF4	100	99.424	ENSMMUG00000005844	PRPF4	100	99.424	Macaca_mulatta
ENSCAFG00020022637	PRPF4	100	88.868	ENSMNEG00000033737	PRPF4	100	88.868	Macaca_nemestrina
ENSCAFG00020022637	PRPF4	100	99.424	ENSMLEG00000040284	PRPF4	100	99.424	Mandrillus_leucophaeus
ENSCAFG00020022637	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSCAFG00020022637	PRPF4	97	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSCAFG00020022637	PRPF4	99	88.738	ENSMGAG00000001796	PRPF4	97	88.462	Meleagris_gallopavo
ENSCAFG00020022637	PRPF4	100	98.848	ENSMAUG00000018022	Prpf4	100	98.848	Mesocricetus_auratus
ENSCAFG00020022637	PRPF4	100	98.656	ENSMICG00000015022	PRPF4	100	98.467	Microcebus_murinus
ENSCAFG00020022637	PRPF4	100	98.848	ENSMOCG00000018273	Prpf4	100	98.848	Microtus_ochrogaster
ENSCAFG00020022637	PRPF4	97	74.851	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSCAFG00020022637	PRPF4	100	94.837	ENSMODG00000004444	-	100	94.837	Monodelphis_domestica
ENSCAFG00020022637	PRPF4	100	95.029	ENSMODG00000025096	-	97	95.029	Monodelphis_domestica
ENSCAFG00020022637	PRPF4	97	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSCAFG00020022637	PRPF4	100	99.232	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.232	Mus_caroli
ENSCAFG00020022637	PRPF4	100	99.232	ENSMUSG00000066148	Prpf4	100	99.232	Mus_musculus
ENSCAFG00020022637	PRPF4	100	99.040	MGP_PahariEiJ_G0028413	Prpf4	100	99.040	Mus_pahari
ENSCAFG00020022637	PRPF4	100	99.232	MGP_SPRETEiJ_G0027042	Prpf4	100	99.232	Mus_spretus
ENSCAFG00020022637	PRPF4	100	99.616	ENSMPUG00000007883	PRPF4	100	99.616	Mustela_putorius_furo
ENSCAFG00020022637	PRPF4	100	99.232	ENSMLUG00000015309	-	97	99.232	Myotis_lucifugus
ENSCAFG00020022637	PRPF4	100	97.313	ENSMLUG00000008626	-	97	97.313	Myotis_lucifugus
ENSCAFG00020022637	PRPF4	100	94.050	ENSNGAG00000000468	Prpf4	100	94.050	Nannospalax_galili
ENSCAFG00020022637	PRPF4	97	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSCAFG00020022637	PRPF4	100	99.808	ENSNLEG00000016647	PRPF4	100	99.808	Nomascus_leucogenys
ENSCAFG00020022637	PRPF4	99	95.136	ENSMEUG00000013256	PRPF4	100	95.525	Notamacropus_eugenii
ENSCAFG00020022637	PRPF4	100	98.851	ENSOPRG00000005302	PRPF4	100	98.851	Ochotona_princeps
ENSCAFG00020022637	PRPF4	100	99.424	ENSODEG00000018147	PRPF4	100	99.424	Octodon_degus
ENSCAFG00020022637	PRPF4	97	76.984	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSCAFG00020022637	PRPF4	100	99.616	ENSOCUG00000005046	PRPF4	100	99.616	Oryctolagus_cuniculus
ENSCAFG00020022637	PRPF4	97	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSCAFG00020022637	PRPF4	97	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSCAFG00020022637	PRPF4	97	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSCAFG00020022637	PRPF4	100	94.626	ENSOGAG00000007802	PRPF4	98	94.626	Otolemur_garnettii
ENSCAFG00020022637	PRPF4	100	99.232	ENSOARG00000006319	PRPF4	97	99.232	Ovis_aries
ENSCAFG00020022637	PRPF4	100	99.424	ENSPPAG00000041797	PRPF4	100	99.424	Pan_paniscus
ENSCAFG00020022637	PRPF4	100	99.808	ENSPPRG00000014360	PRPF4	100	99.808	Panthera_pardus
ENSCAFG00020022637	PRPF4	100	99.808	ENSPTIG00000009574	PRPF4	100	99.808	Panthera_tigris_altaica
ENSCAFG00020022637	PRPF4	100	99.424	ENSPTRG00000021274	PRPF4	100	99.234	Pan_troglodytes
ENSCAFG00020022637	PRPF4	100	99.232	ENSPANG00000025776	PRPF4	96	99.232	Papio_anubis
ENSCAFG00020022637	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSCAFG00020022637	PRPF4	99	91.051	ENSPSIG00000010713	PRPF4	91	90.347	Pelodiscus_sinensis
ENSCAFG00020022637	PRPF4	99	58.727	ENSPMGG00000000997	prpf4	99	58.834	Periophthalmus_magnuspinnatus
ENSCAFG00020022637	PRPF4	100	99.424	ENSPEMG00000024115	Prpf4	100	99.424	Peromyscus_maniculatus_bairdii
ENSCAFG00020022637	PRPF4	99	95.136	ENSPCIG00000003821	PRPF4	99	95.525	Phascolarctos_cinereus
ENSCAFG00020022637	PRPF4	97	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSCAFG00020022637	PRPF4	83	71.560	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSCAFG00020022637	PRPF4	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSCAFG00020022637	PRPF4	99	99.222	ENSPCAG00000002561	PRPF4	100	99.222	Procavia_capensis
ENSCAFG00020022637	PRPF4	100	99.232	ENSPCOG00000011975	PRPF4	100	99.232	Propithecus_coquereli
ENSCAFG00020022637	PRPF4	100	95.785	ENSPVAG00000004708	PRPF4	100	95.785	Pteropus_vampyrus
ENSCAFG00020022637	PRPF4	97	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSCAFG00020022637	PRPF4	97	80.396	ENSPNAG00000000697	prpf4	99	80.396	Pygocentrus_nattereri
ENSCAFG00020022637	PRPF4	100	99.040	ENSRNOG00000014777	Prpf4	100	99.040	Rattus_norvegicus
ENSCAFG00020022637	PRPF4	100	99.616	ENSRBIG00000040221	PRPF4	100	99.616	Rhinopithecus_bieti
ENSCAFG00020022637	PRPF4	100	99.616	ENSRROG00000040240	PRPF4	100	99.616	Rhinopithecus_roxellana
ENSCAFG00020022637	PRPF4	100	95.411	ENSSHAG00000017658	PRPF4	100	95.411	Sarcophilus_harrisii
ENSCAFG00020022637	PRPF4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSCAFG00020022637	PRPF4	97	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSCAFG00020022637	PRPF4	97	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSCAFG00020022637	PRPF4	97	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSCAFG00020022637	PRPF4	100	90.595	ENSSPUG00000015582	PRPF4	100	90.595	Sphenodon_punctatus
ENSCAFG00020022637	PRPF4	97	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSCAFG00020022637	PRPF4	100	99.808	ENSSSCG00000024648	PRPF4	100	99.808	Sus_scrofa
ENSCAFG00020022637	PRPF4	95	90.467	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSCAFG00020022637	PRPF4	97	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSCAFG00020022637	PRPF4	97	74.851	ENSTNIG00000013250	prpf4	99	74.851	Tetraodon_nigroviridis
ENSCAFG00020022637	PRPF4	100	90.613	ENSTBEG00000000821	PRPF4	100	90.613	Tupaia_belangeri
ENSCAFG00020022637	PRPF4	82	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSCAFG00020022637	PRPF4	64	96.407	ENSUAMG00000018288	PRPF4	90	96.407	Ursus_americanus
ENSCAFG00020022637	PRPF4	100	98.848	ENSUMAG00000019375	PRPF4	100	98.848	Ursus_maritimus
ENSCAFG00020022637	PRPF4	100	99.042	ENSVPAG00000005281	PRPF4	100	99.042	Vicugna_pacos
ENSCAFG00020022637	PRPF4	100	98.857	ENSVVUG00000002476	PRPF4	100	98.857	Vulpes_vulpes
ENSCAFG00020022637	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.653	Xiphophorus_couchianus
ENSCAFG00020022637	PRPF4	88	64.410	ENSXMAG00000002750	prpf4	98	65.408	Xiphophorus_maculatus