EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020023002 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 1085 bases
Position: chrQKWQ01001382.1:37628614-37629698
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020029502	Exo_endo_phos	PF03372.23	5.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020034013	-	543	-	ENSCAFP00020029502	180 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020023002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020023002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020023002	-	96	100.000	ENSCAFG00020014377	-	54	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020023002	-	96	91.860	ENSG00000100823	APEX1	100	91.781	Homo_sapiens
ENSCAFG00020023002	-	96	91.860	ENSAMEG00000005418	APEX1	54	91.860	Ailuropoda_melanoleuca
ENSCAFG00020023002	-	94	58.824	ENSAOCG00000009649	apex1	53	58.824	Amphiprion_ocellaris
ENSCAFG00020023002	-	94	58.824	ENSAPEG00000021453	apex1	53	58.824	Amphiprion_percula
ENSCAFG00020023002	-	94	63.158	ENSATEG00000002883	apex1	52	63.158	Anabas_testudineus
ENSCAFG00020023002	-	96	62.500	ENSACAG00000008099	APEX1	54	62.500	Anolis_carolinensis
ENSCAFG00020023002	-	96	93.023	ENSANAG00000030117	APEX1	54	93.023	Aotus_nancymaae
ENSCAFG00020023002	-	72	68.217	ENSACLG00000018441	apex1	53	59.412	Astatotilapia_calliptera
ENSCAFG00020023002	-	96	59.195	ENSAMXG00000034699	apex1	54	59.195	Astyanax_mexicanus
ENSCAFG00020023002	-	96	88.953	ENSBTAG00000002745	APEX1	54	88.953	Bos_taurus
ENSCAFG00020023002	-	96	93.605	ENSCJAG00000009726	APEX1	54	93.605	Callithrix_jacchus
ENSCAFG00020023002	-	96	100.000	ENSCAFG00000032033	APEX1	54	100.000	Canis_familiaris
ENSCAFG00020023002	-	96	88.953	ENSCHIG00000007298	-	54	88.953	Capra_hircus
ENSCAFG00020023002	-	92	77.711	ENSCHIG00000014537	-	57	77.711	Capra_hircus
ENSCAFG00020023002	-	96	88.953	ENSTSYG00000034813	APEX1	54	88.953	Carlito_syrichta
ENSCAFG00020023002	-	96	89.535	ENSCPOG00000030909	APEX1	54	89.535	Cavia_porcellus
ENSCAFG00020023002	-	96	77.326	ENSCCAG00000031931	-	52	77.326	Cebus_capucinus
ENSCAFG00020023002	-	96	93.605	ENSCCAG00000033056	-	54	93.605	Cebus_capucinus
ENSCAFG00020023002	-	96	90.698	ENSCATG00000015580	APEX1	54	90.698	Cercocebus_atys
ENSCAFG00020023002	-	96	90.698	ENSCLAG00000001002	APEX1	54	90.698	Chinchilla_lanigera
ENSCAFG00020023002	-	96	90.116	ENSCSAG00000016670	-	54	90.116	Chlorocebus_sabaeus
ENSCAFG00020023002	-	96	90.116	ENSCSAG00000016685	-	54	90.116	Chlorocebus_sabaeus
ENSCAFG00020023002	-	96	62.428	ENSCPBG00000009567	APEX1	54	62.428	Chrysemys_picta_bellii
ENSCAFG00020023002	-	96	91.279	ENSCANG00000030726	APEX1	54	91.279	Colobus_angolensis_palliatus
ENSCAFG00020023002	-	96	89.535	ENSCGRG00001017046	Apex1	54	89.535	Cricetulus_griseus_chok1gshd
ENSCAFG00020023002	-	96	89.535	ENSCGRG00000008984	Apex1	54	89.535	Cricetulus_griseus_crigri
ENSCAFG00020023002	-	94	60.465	ENSCSEG00000017499	apex1	53	59.302	Cynoglossus_semilaevis
ENSCAFG00020023002	-	74	67.669	ENSCVAG00000022075	apex1	53	58.824	Cyprinodon_variegatus
ENSCAFG00020023002	-	96	58.721	ENSDARG00000045843	apex1	91	60.000	Danio_rerio
ENSCAFG00020023002	-	96	88.953	ENSDNOG00000042234	APEX1	52	88.953	Dasypus_novemcinctus
ENSCAFG00020023002	-	96	90.116	ENSDORG00000001616	Apex1	54	90.116	Dipodomys_ordii
ENSCAFG00020023002	-	96	90.698	ENSETEG00000004855	-	54	90.698	Echinops_telfairi
ENSCAFG00020023002	-	84	91.447	ENSEEUG00000012569	APEX1	53	91.447	Erinaceus_europaeus
ENSCAFG00020023002	-	96	58.140	ENSELUG00000021706	apex1	54	59.770	Esox_lucius
ENSCAFG00020023002	-	96	93.023	ENSFCAG00000030869	APEX1	54	93.023	Felis_catus
ENSCAFG00020023002	-	96	90.116	ENSFDAG00000006120	APEX1	54	90.116	Fukomys_damarensis
ENSCAFG00020023002	-	94	57.647	ENSGMOG00000007943	apex1	53	57.647	Gadus_morhua
ENSCAFG00020023002	-	74	69.173	ENSGAFG00000005311	apex1	53	60.588	Gambusia_affinis
ENSCAFG00020023002	-	94	60.234	ENSGACG00000019497	apex1	53	59.649	Gasterosteus_aculeatus
ENSCAFG00020023002	-	96	61.272	ENSGAGG00000014999	APEX1	54	61.272	Gopherus_agassizii
ENSCAFG00020023002	-	96	91.860	ENSGGOG00000002128	APEX1	89	88.701	Gorilla_gorilla
ENSCAFG00020023002	-	94	60.000	ENSHBUG00000005894	apex1	53	60.588	Haplochromis_burtoni
ENSCAFG00020023002	-	96	90.116	ENSHGLG00000002848	APEX1	54	90.116	Heterocephalus_glaber_female
ENSCAFG00020023002	-	96	90.116	ENSHGLG00100017878	APEX1	54	90.116	Heterocephalus_glaber_male
ENSCAFG00020023002	-	94	59.538	ENSHCOG00000009961	apex1	53	60.000	Hippocampus_comes
ENSCAFG00020023002	-	96	60.694	ENSIPUG00000005799	apex1	53	60.116	Ictalurus_punctatus
ENSCAFG00020023002	-	96	90.116	ENSSTOG00000010096	APEX1	54	90.116	Ictidomys_tridecemlineatus
ENSCAFG00020023002	-	96	89.535	ENSJJAG00000012067	-	54	89.535	Jaculus_jaculus
ENSCAFG00020023002	-	96	79.070	ENSJJAG00000003660	-	54	79.070	Jaculus_jaculus
ENSCAFG00020023002	-	74	68.421	ENSKMAG00000021171	apex1	53	59.412	Kryptolebias_marmoratus
ENSCAFG00020023002	-	94	59.649	ENSLBEG00000010248	apex1	53	59.649	Labrus_bergylta
ENSCAFG00020023002	-	96	59.770	ENSLACG00000008617	APEX1	54	57.471	Latimeria_chalumnae
ENSCAFG00020023002	-	96	60.227	ENSLOCG00000015516	apex1	54	60.227	Lepisosteus_oculatus
ENSCAFG00020023002	-	96	89.535	ENSLAFG00000021872	APEX1	54	89.535	Loxodonta_africana
ENSCAFG00020023002	-	96	90.116	ENSMFAG00000002565	APEX1	54	90.116	Macaca_fascicularis
ENSCAFG00020023002	-	96	90.116	ENSMMUG00000048039	APEX1	54	90.116	Macaca_mulatta
ENSCAFG00020023002	-	96	90.116	ENSMNEG00000036944	APEX1	54	90.116	Macaca_nemestrina
ENSCAFG00020023002	-	96	90.698	ENSMLEG00000042125	APEX1	54	90.698	Mandrillus_leucophaeus
ENSCAFG00020023002	-	94	61.988	ENSMAMG00000023526	apex1	53	61.404	Mastacembelus_armatus
ENSCAFG00020023002	-	72	68.217	ENSMZEG00005014187	apex1	53	59.412	Maylandia_zebra
ENSCAFG00020023002	-	96	89.535	ENSMAUG00000013994	Apex1	54	89.535	Mesocricetus_auratus
ENSCAFG00020023002	-	96	91.279	ENSMICG00000043554	APEX1	54	91.279	Microcebus_murinus
ENSCAFG00020023002	-	96	90.116	ENSMOCG00000013721	Apex1	54	90.116	Microtus_ochrogaster
ENSCAFG00020023002	-	94	57.803	ENSMMOG00000010031	apex1	51	56.069	Mola_mola
ENSCAFG00020023002	-	96	76.437	ENSMODG00000007125	APEX1	54	75.843	Monodelphis_domestica
ENSCAFG00020023002	-	96	93.023	MGP_CAROLIEiJ_G0019209	Apex1	97	93.023	Mus_caroli
ENSCAFG00020023002	-	96	92.442	ENSMUSG00000035960	Apex1	97	92.442	Mus_musculus
ENSCAFG00020023002	-	96	93.023	MGP_PahariEiJ_G0030232	Apex1	97	93.023	Mus_pahari
ENSCAFG00020023002	-	96	92.442	MGP_SPRETEiJ_G0020101	Apex1	97	92.442	Mus_spretus
ENSCAFG00020023002	-	96	90.230	ENSMLUG00000028957	APEX1	54	90.230	Myotis_lucifugus
ENSCAFG00020023002	-	96	89.535	ENSNGAG00000002725	-	54	89.535	Nannospalax_galili
ENSCAFG00020023002	-	96	91.860	ENSNLEG00000010839	APEX1	54	91.860	Nomascus_leucogenys
ENSCAFG00020023002	-	96	80.814	ENSMEUG00000014519	APEX1	54	78.613	Notamacropus_eugenii
ENSCAFG00020023002	-	96	89.535	ENSOPRG00000014029	APEX1	54	88.953	Ochotona_princeps
ENSCAFG00020023002	-	96	73.256	ENSODEG00000004777	-	57	73.256	Octodon_degus
ENSCAFG00020023002	-	96	90.698	ENSODEG00000001703	-	54	90.698	Octodon_degus
ENSCAFG00020023002	-	96	64.045	ENSODEG00000006583	-	54	64.045	Octodon_degus
ENSCAFG00020023002	-	73	68.182	ENSONIG00000012089	apex1	53	60.000	Oreochromis_niloticus
ENSCAFG00020023002	-	96	92.442	ENSOCUG00000005022	APEX1	54	92.442	Oryctolagus_cuniculus
ENSCAFG00020023002	-	94	62.791	ENSORLG00000012378	apex1	53	62.791	Oryzias_latipes
ENSCAFG00020023002	-	94	62.791	ENSORLG00020021371	apex1	53	62.791	Oryzias_latipes_hni
ENSCAFG00020023002	-	94	62.791	ENSORLG00015020089	apex1	53	62.791	Oryzias_latipes_hsok
ENSCAFG00020023002	-	94	60.465	ENSOMEG00000018876	apex1	53	60.465	Oryzias_melastigma
ENSCAFG00020023002	-	96	91.279	ENSOGAG00000013335	-	54	91.279	Otolemur_garnettii
ENSCAFG00020023002	-	94	81.176	ENSOARG00000014424	-	54	81.176	Ovis_aries
ENSCAFG00020023002	-	96	83.140	ENSOARG00000001876	-	56	83.140	Ovis_aries
ENSCAFG00020023002	-	96	88.953	ENSOARG00000019740	-	54	88.953	Ovis_aries
ENSCAFG00020023002	-	96	92.442	ENSPPAG00000038760	APEX1	54	92.442	Pan_paniscus
ENSCAFG00020023002	-	96	93.605	ENSPPRG00000011794	APEX1	54	93.605	Panthera_pardus
ENSCAFG00020023002	-	96	93.023	ENSPTIG00000014829	APEX1	54	93.023	Panthera_tigris_altaica
ENSCAFG00020023002	-	96	92.442	ENSPTRG00000006093	APEX1	54	92.442	Pan_troglodytes
ENSCAFG00020023002	-	96	90.698	ENSPANG00000022757	APEX1	95	86.813	Papio_anubis
ENSCAFG00020023002	-	73	66.412	ENSPKIG00000003504	apex1	54	60.795	Paramormyrops_kingsleyae
ENSCAFG00020023002	-	96	92.442	ENSPEMG00000019097	Apex1	54	92.442	Peromyscus_maniculatus_bairdii
ENSCAFG00020023002	-	96	76.879	ENSPCIG00000023274	APEX1	54	78.035	Phascolarctos_cinereus
ENSCAFG00020023002	-	74	69.925	ENSPFOG00000004178	apex1	53	60.588	Poecilia_formosa
ENSCAFG00020023002	-	74	68.421	ENSPLAG00000012779	apex1	53	60.819	Poecilia_latipinna
ENSCAFG00020023002	-	74	69.925	ENSPMEG00000019623	apex1	53	60.588	Poecilia_mexicana
ENSCAFG00020023002	-	74	68.421	ENSPREG00000014298	apex1	53	59.412	Poecilia_reticulata
ENSCAFG00020023002	-	96	91.860	ENSPPYG00000005565	APEX1	54	91.860	Pongo_abelii
ENSCAFG00020023002	-	96	88.953	ENSPCAG00000010376	APEX1	54	88.953	Procavia_capensis
ENSCAFG00020023002	-	96	91.279	ENSPCOG00000021564	APEX1	54	91.279	Propithecus_coquereli
ENSCAFG00020023002	-	96	91.379	ENSPVAG00000010736	APEX1	54	91.379	Pteropus_vampyrus
ENSCAFG00020023002	-	72	68.217	ENSPNYG00000023940	apex1	53	59.412	Pundamilia_nyererei
ENSCAFG00020023002	-	96	60.116	ENSPNAG00000020897	apex1	56	60.116	Pygocentrus_nattereri
ENSCAFG00020023002	-	96	91.279	ENSRNOG00000009663	Apex1	54	91.279	Rattus_norvegicus
ENSCAFG00020023002	-	96	91.279	ENSRBIG00000038325	APEX1	53	91.279	Rhinopithecus_bieti
ENSCAFG00020023002	-	96	78.488	ENSSBOG00000031372	-	55	78.107	Saimiri_boliviensis_boliviensis
ENSCAFG00020023002	-	96	93.023	ENSSBOG00000018921	-	54	93.023	Saimiri_boliviensis_boliviensis
ENSCAFG00020023002	-	96	74.157	ENSSHAG00000013524	APEX1	55	74.157	Sarcophilus_harrisii
ENSCAFG00020023002	-	96	56.977	ENSSFOG00015001948	apex1	53	56.977	Scleropages_formosus
ENSCAFG00020023002	-	73	66.412	ENSSMAG00000013348	apex1	54	58.235	Scophthalmus_maximus
ENSCAFG00020023002	-	94	59.064	ENSSDUG00000016377	apex1	53	58.824	Seriola_dumerili
ENSCAFG00020023002	-	94	59.064	ENSSLDG00000023005	apex1	53	58.824	Seriola_lalandi_dorsalis
ENSCAFG00020023002	-	94	57.647	ENSSPAG00000000458	apex1	53	57.647	Stegastes_partitus
ENSCAFG00020023002	-	96	91.860	ENSSSCG00000040060	-	54	91.860	Sus_scrofa
ENSCAFG00020023002	-	73	64.394	ENSTRUG00000004268	apex1	50	57.647	Takifugu_rubripes
ENSCAFG00020023002	-	94	58.235	ENSTNIG00000005778	apex1	53	57.059	Tetraodon_nigroviridis
ENSCAFG00020023002	-	96	87.791	ENSTBEG00000006405	APEX1	54	87.791	Tupaia_belangeri
ENSCAFG00020023002	-	96	92.442	ENSUAMG00000010457	APEX1	54	92.442	Ursus_americanus
ENSCAFG00020023002	-	96	92.442	ENSUMAG00000009178	APEX1	54	92.442	Ursus_maritimus
ENSCAFG00020023002	-	96	98.837	ENSVVUG00000009010	APEX1	54	98.837	Vulpes_vulpes
ENSCAFG00020023002	-	96	57.803	ENSXETG00000024773	apex1	54	57.803	Xenopus_tropicalis
ENSCAFG00020023002	-	94	61.765	ENSXCOG00000015233	apex1	53	61.765	Xiphophorus_couchianus
ENSCAFG00020023002	-	96	60.465	ENSXMAG00000006195	apex1	53	61.765	Xiphophorus_maculatus