EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020023145 (Gene tree)
Gene ID: 112669885
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 7713 bases
Position: chrQKWQ01001821.1:43606632-43614344
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020029684	RRM_1	PF00076.22	1.2e-57	1	4
ENSCAFP00020029684	RRM_1	PF00076.22	1.2e-57	2	4
ENSCAFP00020029684	RRM_1	PF00076.22	1.2e-57	3	4
ENSCAFP00020029684	RRM_1	PF00076.22	1.2e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020034220	NCL-201	2043	-	ENSCAFP00020029684	680 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020023145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020023145's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020023145	NCL	50	31.325	ENSCAFG00020001832	TIA1	73	31.325

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020023145	NCL	87	90.034	ENSG00000115053	NCL	100	91.216	Homo_sapiens
ENSCAFG00020023145	NCL	56	99.208	ENSAMEG00000016289	NCL	84	93.884	Ailuropoda_melanoleuca
ENSCAFG00020023145	NCL	97	69.789	ENSANAG00000024378	-	75	80.899	Aotus_nancymaae
ENSCAFG00020023145	NCL	87	88.364	ENSANAG00000035814	-	84	88.245	Aotus_nancymaae
ENSCAFG00020023145	NCL	97	87.722	ENSBTAG00000016174	NCL	87	89.198	Bos_taurus
ENSCAFG00020023145	NCL	73	92.977	ENSBTAG00000026909	-	84	92.977	Bos_taurus
ENSCAFG00020023145	NCL	87	86.655	ENSCJAG00000013538	NCL	83	87.375	Callithrix_jacchus
ENSCAFG00020023145	NCL	99	97.965	ENSCAFG00000011037	NCL	96	97.965	Canis_familiaris
ENSCAFG00020023145	NCL	91	80.854	ENSCHIG00000026149	-	85	83.333	Capra_hircus
ENSCAFG00020023145	NCL	86	96.903	ENSCHIG00000021052	-	86	96.853	Capra_hircus
ENSCAFG00020023145	NCL	89	88.557	ENSCHIG00000010894	-	99	89.955	Capra_hircus
ENSCAFG00020023145	NCL	81	70.324	ENSCHIG00000012143	-	85	73.301	Capra_hircus
ENSCAFG00020023145	NCL	89	86.964	ENSTSYG00000004355	-	84	86.799	Carlito_syrichta
ENSCAFG00020023145	NCL	92	85.413	ENSTSYG00000029779	-	88	84.151	Carlito_syrichta
ENSCAFG00020023145	NCL	84	72.821	ENSTSYG00000036886	-	83	74.419	Carlito_syrichta
ENSCAFG00020023145	NCL	89	80.560	ENSCAPG00000009405	NCL	85	80.395	Cavia_aperea
ENSCAFG00020023145	NCL	89	84.020	ENSCPOG00000001034	NCL	84	83.526	Cavia_porcellus
ENSCAFG00020023145	NCL	56	88.945	ENSCCAG00000000551	-	74	89.055	Cebus_capucinus
ENSCAFG00020023145	NCL	56	97.098	ENSCCAG00000021040	-	93	87.160	Cebus_capucinus
ENSCAFG00020023145	NCL	87	90.236	ENSCATG00000037033	NCL	84	89.735	Cercocebus_atys
ENSCAFG00020023145	NCL	89	83.690	ENSCLAG00000013080	NCL	84	82.208	Chinchilla_lanigera
ENSCAFG00020023145	NCL	65	97.727	ENSCSAG00000006660	NCL	95	97.727	Chlorocebus_sabaeus
ENSCAFG00020023145	NCL	65	77.045	ENSCHOG00000012860	NCL	88	76.471	Choloepus_hoffmanni
ENSCAFG00020023145	NCL	88	66.340	ENSCGRG00001022350	-	87	67.652	Cricetulus_griseus_chok1gshd
ENSCAFG00020023145	NCL	89	80.693	ENSCGRG00001024315	-	84	81.023	Cricetulus_griseus_chok1gshd
ENSCAFG00020023145	NCL	89	80.952	ENSCGRG00000017894	-	87	81.683	Cricetulus_griseus_crigri
ENSCAFG00020023145	NCL	88	64.148	ENSCGRG00000000507	-	85	65.898	Cricetulus_griseus_crigri
ENSCAFG00020023145	NCL	89	87.273	ENSDNOG00000010783	-	84	86.942	Dasypus_novemcinctus
ENSCAFG00020023145	NCL	87	75.163	ENSDNOG00000046347	-	92	75.489	Dasypus_novemcinctus
ENSCAFG00020023145	NCL	56	84.169	ENSDORG00000012513	-	84	76.040	Dipodomys_ordii
ENSCAFG00020023145	NCL	54	73.770	ENSDORG00000023596	-	85	67.442	Dipodomys_ordii
ENSCAFG00020023145	NCL	55	90.186	ENSETEG00000014756	-	86	90.237	Echinops_telfairi
ENSCAFG00020023145	NCL	89	80.565	ENSETEG00000018937	-	84	80.399	Echinops_telfairi
ENSCAFG00020023145	NCL	65	61.486	ENSETEG00000008553	-	88	61.124	Echinops_telfairi
ENSCAFG00020023145	NCL	70	66.667	ENSETEG00000008139	-	80	66.486	Echinops_telfairi
ENSCAFG00020023145	NCL	89	91.598	ENSEASG00005008488	NCL	85	98.929	Equus_asinus_asinus
ENSCAFG00020023145	NCL	97	92.204	ENSECAG00000021868	NCL	84	92.422	Equus_caballus
ENSCAFG00020023145	NCL	89	82.919	ENSEEUG00000005913	NCL	84	81.260	Erinaceus_europaeus
ENSCAFG00020023145	NCL	96	94.946	ENSFCAG00000027622	NCL	84	94.030	Felis_catus
ENSCAFG00020023145	NCL	89	84.843	ENSFDAG00000014291	NCL	85	82.208	Fukomys_damarensis
ENSCAFG00020023145	NCL	87	90.067	ENSGGOG00000004300	NCL	93	87.302	Gorilla_gorilla
ENSCAFG00020023145	NCL	89	85.314	ENSHGLG00000002031	-	84	82.343	Heterocephalus_glaber_female
ENSCAFG00020023145	NCL	88	75.541	ENSHGLG00000011069	-	62	79.955	Heterocephalus_glaber_female
ENSCAFG00020023145	NCL	56	94.195	ENSHGLG00100014537	-	84	81.683	Heterocephalus_glaber_male
ENSCAFG00020023145	NCL	58	82.097	ENSJJAG00000016165	Ncl	86	76.873	Jaculus_jaculus
ENSCAFG00020023145	NCL	88	73.754	ENSLAFG00000013061	NCL	84	73.179	Loxodonta_africana
ENSCAFG00020023145	NCL	87	90.404	ENSMFAG00000040385	NCL	84	90.066	Macaca_fascicularis
ENSCAFG00020023145	NCL	87	90.404	ENSMMUG00000018094	NCL	84	90.066	Macaca_mulatta
ENSCAFG00020023145	NCL	65	93.919	ENSMNEG00000023839	NCL	73	95.040	Macaca_nemestrina
ENSCAFG00020023145	NCL	87	90.404	ENSMLEG00000028935	NCL	84	89.901	Mandrillus_leucophaeus
ENSCAFG00020023145	NCL	87	67.603	ENSMICG00000029975	-	74	80.000	Microcebus_murinus
ENSCAFG00020023145	NCL	97	89.307	ENSMICG00000002538	-	84	88.411	Microcebus_murinus
ENSCAFG00020023145	NCL	89	77.888	MGP_CAROLIEiJ_G0014362	Ncl	84	80.033	Mus_caroli
ENSCAFG00020023145	NCL	89	76.733	ENSMUSG00000026234	Ncl	84	79.208	Mus_musculus
ENSCAFG00020023145	NCL	89	76.974	MGP_PahariEiJ_G0027599	Ncl	84	78.125	Mus_pahari
ENSCAFG00020023145	NCL	89	76.606	MGP_SPRETEiJ_G0015164	Ncl	84	78.583	Mus_spretus
ENSCAFG00020023145	NCL	89	89.309	ENSMLUG00000014547	NCL	84	89.803	Myotis_lucifugus
ENSCAFG00020023145	NCL	88	79.058	ENSNGAG00000002454	-	84	79.739	Nannospalax_galili
ENSCAFG00020023145	NCL	87	76.836	ENSNLEG00000014107	-	93	77.819	Nomascus_leucogenys
ENSCAFG00020023145	NCL	89	65.830	ENSODEG00000007803	-	82	65.637	Octodon_degus
ENSCAFG00020023145	NCL	65	79.054	ENSODEG00000002441	-	74	85.169	Octodon_degus
ENSCAFG00020023145	NCL	88	81.788	ENSODEG00000003281	-	84	81.818	Octodon_degus
ENSCAFG00020023145	NCL	87	78.983	ENSOCUG00000004312	NCL	92	78.582	Oryctolagus_cuniculus
ENSCAFG00020023145	NCL	68	88.127	ENSOGAG00000027852	NCL	62	88.127	Otolemur_garnettii
ENSCAFG00020023145	NCL	87	84.718	ENSOARG00000020709	-	86	84.718	Ovis_aries
ENSCAFG00020023145	NCL	72	91.837	ENSOARG00000013710	-	93	80.132	Ovis_aries
ENSCAFG00020023145	NCL	71	86.598	ENSOARG00000013270	-	89	91.209	Ovis_aries
ENSCAFG00020023145	NCL	87	89.696	ENSPPAG00000011619	NCL	84	89.570	Pan_paniscus
ENSCAFG00020023145	NCL	96	95.245	ENSPPRG00000012603	NCL	84	94.518	Panthera_pardus
ENSCAFG00020023145	NCL	87	94.595	ENSPTIG00000010393	NCL	84	94.352	Panthera_tigris_altaica
ENSCAFG00020023145	NCL	87	90.741	ENSPTRG00000013025	NCL	93	87.698	Pan_troglodytes
ENSCAFG00020023145	NCL	87	90.404	ENSPANG00000010292	NCL	84	90.066	Papio_anubis
ENSCAFG00020023145	NCL	96	84.557	ENSPPYG00000013265	NCL	84	83.224	Pongo_abelii
ENSCAFG00020023145	NCL	88	81.302	ENSPCOG00000004160	-	86	81.157	Propithecus_coquereli
ENSCAFG00020023145	NCL	87	88.610	ENSPCOG00000003051	-	84	87.809	Propithecus_coquereli
ENSCAFG00020023145	NCL	89	89.769	ENSPVAG00000000297	NCL	84	89.439	Pteropus_vampyrus
ENSCAFG00020023145	NCL	89	79.310	ENSRNOG00000018273	Ncl	84	80.131	Rattus_norvegicus
ENSCAFG00020023145	NCL	87	84.459	ENSRBIG00000037525	-	83	84.219	Rhinopithecus_bieti
ENSCAFG00020023145	NCL	63	98.154	ENSRBIG00000035396	-	76	98.154	Rhinopithecus_bieti
ENSCAFG00020023145	NCL	96	85.577	ENSRROG00000036103	-	91	86.726	Rhinopithecus_roxellana
ENSCAFG00020023145	NCL	87	89.394	ENSRROG00000028756	-	84	90.232	Rhinopithecus_roxellana
ENSCAFG00020023145	NCL	65	89.749	ENSSBOG00000027549	-	77	89.749	Saimiri_boliviensis_boliviensis
ENSCAFG00020023145	NCL	52	77.273	ENSSBOG00000023094	-	66	80.899	Saimiri_boliviensis_boliviensis
ENSCAFG00020023145	NCL	56	96.834	ENSSBOG00000029193	-	84	87.438	Saimiri_boliviensis_boliviensis
ENSCAFG00020023145	NCL	89	89.034	ENSSSCG00000016275	NCL	84	89.362	Sus_scrofa
ENSCAFG00020023145	NCL	58	84.697	ENSTBEG00000001546	-	84	79.734	Tupaia_belangeri
ENSCAFG00020023145	NCL	62	81.870	ENSTBEG00000002469	-	61	81.714	Tupaia_belangeri
ENSCAFG00020023145	NCL	89	90.033	ENSTTRG00000009094	NCL	84	89.535	Tursiops_truncatus
ENSCAFG00020023145	NCL	77	95.511	ENSUAMG00000005639	NCL	100	96.620	Ursus_americanus
ENSCAFG00020023145	NCL	89	95.017	ENSUMAG00000015789	NCL	84	95.183	Ursus_maritimus
ENSCAFG00020023145	NCL	64	88.764	ENSVPAG00000001796	NCL	62	88.764	Vicugna_pacos
ENSCAFG00020023145	NCL	97	94.109	ENSVVUG00000025564	NCL	92	88.496	Vulpes_vulpes