EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020023584 (Gene tree)
Gene ID: 112659938
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 25224 bases
Position: chrQKWQ01000243.1:12130791-12156014
Accession: 112659938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020030234	RRM_1	PF00076.22	2.6e-27	1	2
ENSCAFP00020030234	RRM_1	PF00076.22	2.6e-27	2	2
ENSCAFP00020030235	RRM_1	PF00076.22	3.2e-27	1	2
ENSCAFP00020030235	RRM_1	PF00076.22	3.2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020034866	TRNAU1AP-202	906	-	ENSCAFP00020030235	301 (aa)	-	-
ENSCAFT00020034865	TRNAU1AP-201	864	-	ENSCAFP00020030234	287 (aa)	XP_025302962	UPI00004BD360

Gene Model

Click here to download ENSCAFG00020023584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020023584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020023584	TRNAU1AP	60	32.515	ENSCAFG00020019182	-	52	32.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSG00000180098	TRNAU1AP	100	99.652	Homo_sapiens
ENSCAFG00020023584	TRNAU1AP	98	58.416	ENSAPOG00000007148	TRNAU1AP	98	58.416	Acanthochromis_polyacanthus
ENSCAFG00020023584	TRNAU1AP	100	98.606	ENSAMEG00000011367	TRNAU1AP	100	98.606	Ailuropoda_melanoleuca
ENSCAFG00020023584	TRNAU1AP	91	70.115	ENSACIG00000004161	trnau1apa	93	70.115	Amphilophus_citrinellus
ENSCAFG00020023584	TRNAU1AP	98	58.416	ENSAOCG00000008056	trnau1apa	98	58.416	Amphiprion_ocellaris
ENSCAFG00020023584	TRNAU1AP	98	58.416	ENSAPEG00000008868	trnau1apa	98	58.586	Amphiprion_percula
ENSCAFG00020023584	TRNAU1AP	96	59.732	ENSATEG00000012140	trnau1apa	98	56.270	Anabas_testudineus
ENSCAFG00020023584	TRNAU1AP	94	93.704	ENSAPLG00000002606	TRNAU1AP	99	93.704	Anas_platyrhynchos
ENSCAFG00020023584	TRNAU1AP	99	76.224	ENSACAG00000003995	-	99	76.224	Anolis_carolinensis
ENSCAFG00020023584	TRNAU1AP	67	51.562	ENSACAG00000004205	-	73	51.562	Anolis_carolinensis
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSANAG00000018976	TRNAU1AP	100	99.652	Aotus_nancymaae
ENSCAFG00020023584	TRNAU1AP	98	59.000	ENSACLG00000018515	trnau1apa	98	60.403	Astatotilapia_calliptera
ENSCAFG00020023584	TRNAU1AP	94	65.556	ENSAMXG00000029240	-	96	65.556	Astyanax_mexicanus
ENSCAFG00020023584	TRNAU1AP	96	57.500	ENSAMXG00000013750	trnau1apa	91	57.500	Astyanax_mexicanus
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSBTAG00000010393	TRNAU1AP	100	99.303	Bos_taurus
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSCJAG00000009717	TRNAU1AP	100	99.652	Callithrix_jacchus
ENSCAFG00020023584	TRNAU1AP	100	100.000	ENSCAFG00000011735	TRNAU1AP	100	100.000	Canis_familiaris
ENSCAFG00020023584	TRNAU1AP	100	98.955	ENSCHIG00000023215	TRNAU1AP	100	98.955	Capra_hircus
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSTSYG00000003506	TRNAU1AP	100	99.303	Carlito_syrichta
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSCPOG00000001925	TRNAU1AP	100	99.652	Cavia_porcellus
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSCCAG00000037506	TRNAU1AP	100	99.652	Cebus_capucinus
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSCATG00000044617	TRNAU1AP	100	99.303	Cercocebus_atys
ENSCAFG00020023584	TRNAU1AP	100	98.955	ENSCLAG00000008223	TRNAU1AP	100	98.955	Chinchilla_lanigera
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSCSAG00000001014	TRNAU1AP	100	99.303	Chlorocebus_sabaeus
ENSCAFG00020023584	TRNAU1AP	95	94.526	ENSCPBG00000000121	TRNAU1AP	100	94.526	Chrysemys_picta_bellii
ENSCAFG00020023584	TRNAU1AP	59	51.462	ENSCSAVG00000011781	-	90	51.462	Ciona_savignyi
ENSCAFG00020023584	TRNAU1AP	100	87.805	ENSCANG00000041949	TRNAU1AP	100	99.435	Colobus_angolensis_palliatus
ENSCAFG00020023584	TRNAU1AP	100	98.955	ENSCGRG00001004713	Trnau1ap	100	98.955	Cricetulus_griseus_chok1gshd
ENSCAFG00020023584	TRNAU1AP	100	98.955	ENSCGRG00000014532	Trnau1ap	100	98.955	Cricetulus_griseus_crigri
ENSCAFG00020023584	TRNAU1AP	98	58.333	ENSCSEG00000006663	trnau1apa	95	56.954	Cynoglossus_semilaevis
ENSCAFG00020023584	TRNAU1AP	97	57.823	ENSCVAG00000018069	trnau1apa	94	59.341	Cyprinodon_variegatus
ENSCAFG00020023584	TRNAU1AP	96	53.357	ENSDARG00000101323	trnau1apa	89	51.761	Danio_rerio
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSDNOG00000033009	TRNAU1AP	100	99.303	Dasypus_novemcinctus
ENSCAFG00020023584	TRNAU1AP	67	77.604	ENSDNOG00000047959	-	97	78.075	Dasypus_novemcinctus
ENSCAFG00020023584	TRNAU1AP	99	91.259	ENSDORG00000006349	Trnau1ap	100	100.000	Dipodomys_ordii
ENSCAFG00020023584	TRNAU1AP	96	38.344	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSCAFG00020023584	TRNAU1AP	85	94.286	ENSETEG00000012594	TRNAU1AP	100	94.286	Echinops_telfairi
ENSCAFG00020023584	TRNAU1AP	55	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSEASG00005010062	TRNAU1AP	100	99.652	Equus_asinus_asinus
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSECAG00000012980	TRNAU1AP	100	99.652	Equus_caballus
ENSCAFG00020023584	TRNAU1AP	96	63.415	ENSELUG00000017686	trnau1apa	94	63.066	Esox_lucius
ENSCAFG00020023584	TRNAU1AP	96	70.526	ENSELUG00000022790	-	94	52.055	Esox_lucius
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSFCAG00000013401	TRNAU1AP	100	99.652	Felis_catus
ENSCAFG00020023584	TRNAU1AP	95	93.431	ENSFALG00000001371	TRNAU1AP	100	93.431	Ficedula_albicollis
ENSCAFG00020023584	TRNAU1AP	100	98.955	ENSFDAG00000018599	TRNAU1AP	100	98.955	Fukomys_damarensis
ENSCAFG00020023584	TRNAU1AP	79	60.816	ENSFHEG00000018232	trnau1apa	86	56.757	Fundulus_heteroclitus
ENSCAFG00020023584	TRNAU1AP	95	53.846	ENSGMOG00000016508	trnau1apa	93	54.930	Gadus_morhua
ENSCAFG00020023584	TRNAU1AP	100	93.031	ENSGALG00000001310	-	100	93.031	Gallus_gallus
ENSCAFG00020023584	TRNAU1AP	68	48.826	ENSGALG00000012721	C2H6orf52	95	44.402	Gallus_gallus
ENSCAFG00020023584	TRNAU1AP	78	58.403	ENSGAFG00000004928	trnau1apa	90	59.244	Gambusia_affinis
ENSCAFG00020023584	TRNAU1AP	98	60.274	ENSGACG00000001443	trnau1apa	95	59.932	Gasterosteus_aculeatus
ENSCAFG00020023584	TRNAU1AP	95	94.891	ENSGAGG00000004940	TRNAU1AP	100	94.891	Gopherus_agassizii
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSGGOG00000003511	TRNAU1AP	100	99.652	Gorilla_gorilla
ENSCAFG00020023584	TRNAU1AP	98	58.033	ENSHBUG00000002510	trnau1apa	98	59.406	Haplochromis_burtoni
ENSCAFG00020023584	TRNAU1AP	100	98.955	ENSHGLG00000010380	TRNAU1AP	100	98.955	Heterocephalus_glaber_female
ENSCAFG00020023584	TRNAU1AP	100	96.516	ENSHGLG00100012699	TRNAU1AP	100	96.516	Heterocephalus_glaber_male
ENSCAFG00020023584	TRNAU1AP	99	57.096	ENSHCOG00000014770	trnau1apa	97	55.195	Hippocampus_comes
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSSTOG00000000079	TRNAU1AP	100	99.652	Ictidomys_tridecemlineatus
ENSCAFG00020023584	TRNAU1AP	100	98.606	ENSJJAG00000010128	Trnau1ap	100	98.606	Jaculus_jaculus
ENSCAFG00020023584	TRNAU1AP	95	60.208	ENSKMAG00000001230	trnau1apa	93	58.478	Kryptolebias_marmoratus
ENSCAFG00020023584	TRNAU1AP	95	60.751	ENSLBEG00000011683	trnau1apa	93	59.864	Labrus_bergylta
ENSCAFG00020023584	TRNAU1AP	99	72.982	ENSLACG00000005541	TRNAU1AP	99	72.982	Latimeria_chalumnae
ENSCAFG00020023584	TRNAU1AP	99	72.378	ENSLOCG00000004041	trnau1apa	99	71.329	Lepisosteus_oculatus
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSLAFG00000007628	TRNAU1AP	100	99.303	Loxodonta_africana
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSMFAG00000043751	TRNAU1AP	100	99.303	Macaca_fascicularis
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSMMUG00000006561	TRNAU1AP	100	99.303	Macaca_mulatta
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSMNEG00000044201	TRNAU1AP	100	99.303	Macaca_nemestrina
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSMLEG00000015649	TRNAU1AP	100	99.303	Mandrillus_leucophaeus
ENSCAFG00020023584	TRNAU1AP	98	58.958	ENSMAMG00000001247	trnau1apa	98	58.824	Mastacembelus_armatus
ENSCAFG00020023584	TRNAU1AP	98	59.000	ENSMZEG00005017722	trnau1apa	98	60.403	Maylandia_zebra
ENSCAFG00020023584	TRNAU1AP	97	92.806	ENSMGAG00000002105	TRNAU1AP	100	92.806	Meleagris_gallopavo
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSMICG00000008386	TRNAU1AP	100	99.303	Microcebus_murinus
ENSCAFG00020023584	TRNAU1AP	100	98.606	ENSMOCG00000011189	Trnau1ap	100	98.606	Microtus_ochrogaster
ENSCAFG00020023584	TRNAU1AP	95	58.088	ENSMMOG00000012107	trnau1apa	92	58.088	Mola_mola
ENSCAFG00020023584	TRNAU1AP	100	95.122	ENSMODG00000010927	TRNAU1AP	100	95.122	Monodelphis_domestica
ENSCAFG00020023584	TRNAU1AP	96	61.092	ENSMALG00000016778	trnau1apa	94	58.362	Monopterus_albus
ENSCAFG00020023584	TRNAU1AP	100	98.606	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSCAFG00020023584	TRNAU1AP	100	98.606	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSCAFG00020023584	TRNAU1AP	100	98.955	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSCAFG00020023584	TRNAU1AP	100	98.258	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSCAFG00020023584	TRNAU1AP	100	98.955	ENSMPUG00000015511	TRNAU1AP	100	98.955	Mustela_putorius_furo
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSMLUG00000012586	TRNAU1AP	100	99.303	Myotis_lucifugus
ENSCAFG00020023584	TRNAU1AP	100	97.213	ENSNGAG00000015881	Trnau1ap	100	97.213	Nannospalax_galili
ENSCAFG00020023584	TRNAU1AP	99	56.997	ENSNBRG00000001758	trnau1apa	98	56.997	Neolamprologus_brichardi
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSNLEG00000009822	TRNAU1AP	100	99.652	Nomascus_leucogenys
ENSCAFG00020023584	TRNAU1AP	97	93.885	ENSMEUG00000006117	TRNAU1AP	100	93.885	Notamacropus_eugenii
ENSCAFG00020023584	TRNAU1AP	70	97.273	ENSOPRG00000007084	-	69	97.273	Ochotona_princeps
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSODEG00000002970	TRNAU1AP	100	99.303	Octodon_degus
ENSCAFG00020023584	TRNAU1AP	80	59.671	ENSONIG00000004715	trnau1apa	95	59.917	Oreochromis_niloticus
ENSCAFG00020023584	TRNAU1AP	99	74.825	ENSOANG00000005325	-	99	74.825	Ornithorhynchus_anatinus
ENSCAFG00020023584	TRNAU1AP	100	97.561	ENSOCUG00000011704	-	100	97.561	Oryctolagus_cuniculus
ENSCAFG00020023584	TRNAU1AP	100	77.431	ENSOCUG00000002353	-	100	77.431	Oryctolagus_cuniculus
ENSCAFG00020023584	TRNAU1AP	89	77.344	ENSOCUG00000006834	-	100	75.391	Oryctolagus_cuniculus
ENSCAFG00020023584	TRNAU1AP	98	58.865	ENSORLG00000010428	trnau1apa	95	57.042	Oryzias_latipes
ENSCAFG00020023584	TRNAU1AP	98	58.020	ENSORLG00020000926	trnau1ap	95	56.849	Oryzias_latipes_hni
ENSCAFG00020023584	TRNAU1AP	98	58.020	ENSORLG00015009858	trnau1ap	95	56.849	Oryzias_latipes_hsok
ENSCAFG00020023584	TRNAU1AP	98	59.044	ENSOMEG00000007873	trnau1apa	95	56.164	Oryzias_melastigma
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSOGAG00000002274	TRNAU1AP	100	99.303	Otolemur_garnettii
ENSCAFG00020023584	TRNAU1AP	100	98.955	ENSOARG00000002843	TRNAU1AP	100	98.955	Ovis_aries
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSPPAG00000033927	TRNAU1AP	100	99.652	Pan_paniscus
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSPPRG00000004416	TRNAU1AP	100	99.652	Panthera_pardus
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSPTIG00000016677	TRNAU1AP	100	99.652	Panthera_tigris_altaica
ENSCAFG00020023584	TRNAU1AP	93	80.812	ENSPTRG00000000434	-	97	79.336	Pan_troglodytes
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSPANG00000016019	TRNAU1AP	100	99.303	Papio_anubis
ENSCAFG00020023584	TRNAU1AP	94	74.468	ENSPKIG00000022205	-	93	77.528	Paramormyrops_kingsleyae
ENSCAFG00020023584	TRNAU1AP	95	59.717	ENSPKIG00000015511	trnau1apa	92	57.951	Paramormyrops_kingsleyae
ENSCAFG00020023584	TRNAU1AP	95	94.891	ENSPSIG00000006864	TRNAU1AP	100	94.891	Pelodiscus_sinensis
ENSCAFG00020023584	TRNAU1AP	94	61.397	ENSPMGG00000023893	trnau1apa	91	60.148	Periophthalmus_magnuspinnatus
ENSCAFG00020023584	TRNAU1AP	100	98.606	ENSPEMG00000007877	Trnau1ap	100	98.606	Peromyscus_maniculatus_bairdii
ENSCAFG00020023584	TRNAU1AP	78	60.987	ENSPMAG00000005934	trnau1apa	99	58.744	Petromyzon_marinus
ENSCAFG00020023584	TRNAU1AP	60	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSCAFG00020023584	TRNAU1AP	95	56.944	ENSPFOG00000008100	trnau1apa	93	57.639	Poecilia_formosa
ENSCAFG00020023584	TRNAU1AP	91	56.679	ENSPLAG00000010236	trnau1apa	93	57.401	Poecilia_latipinna
ENSCAFG00020023584	TRNAU1AP	96	55.862	ENSPMEG00000016387	trnau1apa	92	56.552	Poecilia_mexicana
ENSCAFG00020023584	TRNAU1AP	93	53.903	ENSPREG00000019821	trnau1apa	86	64.286	Poecilia_reticulata
ENSCAFG00020023584	TRNAU1AP	100	78.049	ENSPPYG00000001639	-	100	86.434	Pongo_abelii
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSPCOG00000027712	-	100	99.303	Propithecus_coquereli
ENSCAFG00020023584	TRNAU1AP	98	82.206	ENSPCOG00000023470	-	100	82.206	Propithecus_coquereli
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSPVAG00000017214	TRNAU1AP	100	99.652	Pteropus_vampyrus
ENSCAFG00020023584	TRNAU1AP	98	58.033	ENSPNYG00000010130	trnau1apa	98	58.984	Pundamilia_nyererei
ENSCAFG00020023584	TRNAU1AP	96	54.895	ENSPNAG00000024905	trnau1apa	92	54.093	Pygocentrus_nattereri
ENSCAFG00020023584	TRNAU1AP	94	90.775	ENSRNOG00000055344	Trnau1ap	92	90.775	Rattus_norvegicus
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSRBIG00000029083	TRNAU1AP	100	99.652	Rhinopithecus_bieti
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSRROG00000029128	TRNAU1AP	100	99.652	Rhinopithecus_roxellana
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSSBOG00000021299	TRNAU1AP	100	99.652	Saimiri_boliviensis_boliviensis
ENSCAFG00020023584	TRNAU1AP	100	94.425	ENSSHAG00000008108	TRNAU1AP	100	94.425	Sarcophilus_harrisii
ENSCAFG00020023584	TRNAU1AP	98	53.722	ENSSMAG00000020851	trnau1apa	98	57.049	Scophthalmus_maximus
ENSCAFG00020023584	TRNAU1AP	96	58.844	ENSSDUG00000011734	trnau1apa	94	57.483	Seriola_dumerili
ENSCAFG00020023584	TRNAU1AP	96	46.545	ENSSLDG00000012101	trnau1apa	92	50.538	Seriola_lalandi_dorsalis
ENSCAFG00020023584	TRNAU1AP	97	98.201	ENSSARG00000007536	TRNAU1AP	100	98.201	Sorex_araneus
ENSCAFG00020023584	TRNAU1AP	61	82.386	ENSSPUG00000010415	-	100	82.386	Sphenodon_punctatus
ENSCAFG00020023584	TRNAU1AP	99	86.364	ENSSPUG00000010400	-	100	86.364	Sphenodon_punctatus
ENSCAFG00020023584	TRNAU1AP	96	59.524	ENSSPAG00000005029	trnau1apa	98	57.980	Stegastes_partitus
ENSCAFG00020023584	TRNAU1AP	100	99.652	ENSSSCG00000030284	TRNAU1AP	100	99.652	Sus_scrofa
ENSCAFG00020023584	TRNAU1AP	97	93.885	ENSTGUG00000000735	-	100	93.885	Taeniopygia_guttata
ENSCAFG00020023584	TRNAU1AP	68	52.551	ENSTGUG00000005908	-	100	52.551	Taeniopygia_guttata
ENSCAFG00020023584	TRNAU1AP	98	59.136	ENSTRUG00000003352	trnau1apa	98	58.472	Takifugu_rubripes
ENSCAFG00020023584	TRNAU1AP	95	59.233	ENSTNIG00000006129	trnau1apa	98	57.096	Tetraodon_nigroviridis
ENSCAFG00020023584	TRNAU1AP	85	87.755	ENSTBEG00000008049	-	100	87.755	Tupaia_belangeri
ENSCAFG00020023584	TRNAU1AP	100	99.303	ENSTTRG00000001854	TRNAU1AP	100	99.303	Tursiops_truncatus
ENSCAFG00020023584	TRNAU1AP	95	99.270	ENSUAMG00000008789	TRNAU1AP	100	99.270	Ursus_americanus
ENSCAFG00020023584	TRNAU1AP	100	98.955	ENSUMAG00000011068	TRNAU1AP	100	98.955	Ursus_maritimus
ENSCAFG00020023584	TRNAU1AP	100	88.699	ENSVPAG00000006778	TRNAU1AP	100	88.699	Vicugna_pacos
ENSCAFG00020023584	TRNAU1AP	99	98.239	ENSVVUG00000012518	TRNAU1AP	100	98.986	Vulpes_vulpes
ENSCAFG00020023584	TRNAU1AP	95	55.903	ENSXMAG00000017361	trnau1apa	93	57.639	Xiphophorus_maculatus