EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020023713 (Gene tree)
Gene ID: 112677985
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 43611 bases
Position: chrQKWQ01002226.1:14622267-14665877
Accession: 29167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020030664	R3H	PF01424.22	3.3e-10	1	1
ENSCAFP00020030647	R3H	PF01424.22	3.3e-10	1	1
ENSCAFP00020030650	R3H	PF01424.22	3.4e-10	1	1
ENSCAFP00020030662	R3H	PF01424.22	3.4e-10	1	1
ENSCAFP00020030652	R3H	PF01424.22	3.5e-10	1	1
ENSCAFP00020030651	R3H	PF01424.22	3.5e-10	1	1
ENSCAFP00020030661	R3H	PF01424.22	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020035378	R3HDM2-207	2823	-	ENSCAFP00020030664	940 (aa)	-	-
ENSCAFT00020035366	R3HDM2-204	2964	-	ENSCAFP00020030652	987 (aa)	-	-
ENSCAFT00020035365	R3HDM2-203	2970	-	ENSCAFP00020030651	989 (aa)	-	-
ENSCAFT00020035364	R3HDM2-202	3015	-	ENSCAFP00020030650	1004 (aa)	-	-
ENSCAFT00020035375	R3HDM2-205	2931	-	ENSCAFP00020030661	976 (aa)	-	-
ENSCAFT00020035376	R3HDM2-206	2868	-	ENSCAFP00020030662	955 (aa)	-	-
ENSCAFT00020035361	R3HDM2-201	3114	-	ENSCAFP00020030647	1037 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020023713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020023713's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020023713	R3HDM2	95	59.413	ENSCAFG00020016119	R3HDM1	89	58.738
ENSCAFG00020023713	R3HDM2	60	50.510	ENSCAFG00020001655	ARPP21	77	62.434

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020023713	R3HDM2	100	96.973	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSCAFG00020023713	R3HDM2	62	36.882	ENSAPOG00000021873	-	87	35.052	Acanthochromis_polyacanthus
ENSCAFG00020023713	R3HDM2	99	66.279	ENSAPOG00000020341	r3hdm2	95	67.850	Acanthochromis_polyacanthus
ENSCAFG00020023713	R3HDM2	100	97.036	ENSAMEG00000004812	R3HDM2	100	97.036	Ailuropoda_melanoleuca
ENSCAFG00020023713	R3HDM2	93	68.415	ENSACIG00000016146	r3hdm2	98	67.429	Amphilophus_citrinellus
ENSCAFG00020023713	R3HDM2	99	66.052	ENSAOCG00000023694	r3hdm2	95	67.534	Amphiprion_ocellaris
ENSCAFG00020023713	R3HDM2	62	38.301	ENSAPEG00000014325	-	87	35.407	Amphiprion_percula
ENSCAFG00020023713	R3HDM2	99	66.311	ENSAPEG00000008851	r3hdm2	100	67.497	Amphiprion_percula
ENSCAFG00020023713	R3HDM2	99	64.802	ENSATEG00000025024	r3hdm2	100	68.730	Anabas_testudineus
ENSCAFG00020023713	R3HDM2	94	88.519	ENSAPLG00000004298	R3HDM2	94	82.927	Anas_platyrhynchos
ENSCAFG00020023713	R3HDM2	100	82.532	ENSACAG00000006388	R3HDM2	100	82.434	Anolis_carolinensis
ENSCAFG00020023713	R3HDM2	98	92.276	ENSANAG00000031310	-	100	91.059	Aotus_nancymaae
ENSCAFG00020023713	R3HDM2	100	96.771	ENSANAG00000025397	-	100	96.771	Aotus_nancymaae
ENSCAFG00020023713	R3HDM2	99	64.581	ENSACLG00000019106	r3hdm2	95	67.502	Astatotilapia_calliptera
ENSCAFG00020023713	R3HDM2	94	60.745	ENSAMXG00000017180	r3hdm2	99	61.612	Astyanax_mexicanus
ENSCAFG00020023713	R3HDM2	100	97.175	ENSBTAG00000018361	R3HDM2	100	97.175	Bos_taurus
ENSCAFG00020023713	R3HDM2	100	96.367	ENSCJAG00000007365	R3HDM2	100	96.367	Callithrix_jacchus
ENSCAFG00020023713	R3HDM2	100	99.296	ENSCAFG00000000215	R3HDM2	100	99.296	Canis_familiaris
ENSCAFG00020023713	R3HDM2	100	96.771	ENSCHIG00000014022	R3HDM2	100	96.771	Capra_hircus
ENSCAFG00020023713	R3HDM2	100	96.032	ENSTSYG00000001449	R3HDM2	100	96.032	Carlito_syrichta
ENSCAFG00020023713	R3HDM2	100	93.542	ENSCPOG00000009217	R3HDM2	100	92.533	Cavia_porcellus
ENSCAFG00020023713	R3HDM2	89	96.583	ENSCCAG00000026083	R3HDM2	100	96.583	Cebus_capucinus
ENSCAFG00020023713	R3HDM2	100	96.771	ENSCATG00000036929	R3HDM2	100	96.771	Cercocebus_atys
ENSCAFG00020023713	R3HDM2	100	94.260	ENSCLAG00000011997	R3HDM2	100	93.152	Chinchilla_lanigera
ENSCAFG00020023713	R3HDM2	100	94.157	ENSCSAG00000004911	R3HDM2	100	93.774	Chlorocebus_sabaeus
ENSCAFG00020023713	R3HDM2	76	91.781	ENSCHOG00000005636	R3HDM2	91	91.781	Choloepus_hoffmanni
ENSCAFG00020023713	R3HDM2	100	79.757	ENSCPBG00000013922	R3HDM2	100	79.683	Chrysemys_picta_bellii
ENSCAFG00020023713	R3HDM2	100	96.569	ENSCANG00000043807	R3HDM2	100	96.569	Colobus_angolensis_palliatus
ENSCAFG00020023713	R3HDM2	100	93.756	ENSCGRG00001017324	R3hdm2	100	93.152	Cricetulus_griseus_chok1gshd
ENSCAFG00020023713	R3HDM2	100	92.344	ENSCGRG00000003862	R3hdm2	100	91.770	Cricetulus_griseus_crigri
ENSCAFG00020023713	R3HDM2	96	67.080	ENSCSEG00000010925	r3hdm2	100	67.769	Cynoglossus_semilaevis
ENSCAFG00020023713	R3HDM2	99	63.879	ENSCVAG00000009058	r3hdm2	100	66.222	Cyprinodon_variegatus
ENSCAFG00020023713	R3HDM2	93	65.278	ENSDARG00000102610	r3hdm2	99	66.275	Danio_rerio
ENSCAFG00020023713	R3HDM2	100	93.136	ENSDNOG00000015033	R3HDM2	100	95.713	Dasypus_novemcinctus
ENSCAFG00020023713	R3HDM2	94	94.245	ENSDORG00000011462	R3hdm2	99	94.245	Dipodomys_ordii
ENSCAFG00020023713	R3HDM2	100	97.379	ENSEASG00005007091	R3HDM2	100	97.379	Equus_asinus_asinus
ENSCAFG00020023713	R3HDM2	100	97.477	ENSECAG00000003157	R3HDM2	100	97.477	Equus_caballus
ENSCAFG00020023713	R3HDM2	96	64.911	ENSELUG00000015969	r3hdm2	100	64.186	Esox_lucius
ENSCAFG00020023713	R3HDM2	100	97.132	ENSFCAG00000000192	R3HDM2	100	97.104	Felis_catus
ENSCAFG00020023713	R3HDM2	89	80.645	ENSFALG00000000255	R3HDM2	100	80.645	Ficedula_albicollis
ENSCAFG00020023713	R3HDM2	100	93.166	ENSFDAG00000019385	R3HDM2	100	94.372	Fukomys_damarensis
ENSCAFG00020023713	R3HDM2	99	64.418	ENSFHEG00000016484	r3hdm2	95	66.537	Fundulus_heteroclitus
ENSCAFG00020023713	R3HDM2	95	65.483	ENSGMOG00000007961	r3hdm2	100	64.398	Gadus_morhua
ENSCAFG00020023713	R3HDM2	100	80.432	ENSGALG00000043736	R3HDM2	100	78.358	Gallus_gallus
ENSCAFG00020023713	R3HDM2	99	65.466	ENSGAFG00000013887	r3hdm2	100	66.667	Gambusia_affinis
ENSCAFG00020023713	R3HDM2	62	37.178	ENSGAFG00000015558	-	88	35.994	Gambusia_affinis
ENSCAFG00020023713	R3HDM2	95	68.240	ENSGACG00000006442	r3hdm2	100	68.338	Gasterosteus_aculeatus
ENSCAFG00020023713	R3HDM2	100	80.705	ENSGAGG00000017797	R3HDM2	100	80.509	Gopherus_agassizii
ENSCAFG00020023713	R3HDM2	100	96.872	ENSGGOG00000015007	R3HDM2	100	96.872	Gorilla_gorilla
ENSCAFG00020023713	R3HDM2	68	35.841	ENSHBUG00000018525	-	50	45.179	Haplochromis_burtoni
ENSCAFG00020023713	R3HDM2	99	75.662	ENSHGLG00000010421	-	97	86.644	Heterocephalus_glaber_female
ENSCAFG00020023713	R3HDM2	100	93.295	ENSHGLG00000010434	-	100	92.529	Heterocephalus_glaber_female
ENSCAFG00020023713	R3HDM2	96	83.562	ENSHGLG00100018871	-	99	83.562	Heterocephalus_glaber_male
ENSCAFG00020023713	R3HDM2	100	94.153	ENSHGLG00100004183	-	100	93.347	Heterocephalus_glaber_male
ENSCAFG00020023713	R3HDM2	99	63.976	ENSHCOG00000001142	r3hdm2	92	66.979	Hippocampus_comes
ENSCAFG00020023713	R3HDM2	99	62.361	ENSIPUG00000023873	r3hdm2	87	79.019	Ictalurus_punctatus
ENSCAFG00020023713	R3HDM2	100	92.094	ENSSTOG00000013424	R3HDM2	100	92.094	Ictidomys_tridecemlineatus
ENSCAFG00020023713	R3HDM2	100	93.966	ENSJJAG00000010001	R3hdm2	100	93.672	Jaculus_jaculus
ENSCAFG00020023713	R3HDM2	96	67.177	ENSKMAG00000012695	r3hdm2	99	67.899	Kryptolebias_marmoratus
ENSCAFG00020023713	R3HDM2	95	67.473	ENSLBEG00000013115	r3hdm2	92	67.118	Labrus_bergylta
ENSCAFG00020023713	R3HDM2	50	40.968	ENSLBEG00000002779	-	52	47.761	Labrus_bergylta
ENSCAFG00020023713	R3HDM2	95	72.334	ENSLACG00000019064	r3hdm2	100	72.133	Latimeria_chalumnae
ENSCAFG00020023713	R3HDM2	100	71.386	ENSLOCG00000005976	r3hdm2	100	71.681	Lepisosteus_oculatus
ENSCAFG00020023713	R3HDM2	100	94.061	ENSLAFG00000006510	R3HDM2	100	93.199	Loxodonta_africana
ENSCAFG00020023713	R3HDM2	100	96.872	ENSMFAG00000036385	R3HDM2	100	96.872	Macaca_fascicularis
ENSCAFG00020023713	R3HDM2	100	96.872	ENSMMUG00000021789	R3HDM2	100	96.872	Macaca_mulatta
ENSCAFG00020023713	R3HDM2	100	96.774	ENSMNEG00000025314	R3HDM2	100	96.774	Macaca_nemestrina
ENSCAFG00020023713	R3HDM2	100	96.872	ENSMLEG00000028915	R3HDM2	100	96.872	Mandrillus_leucophaeus
ENSCAFG00020023713	R3HDM2	99	65.381	ENSMAMG00000009793	r3hdm2	95	66.795	Mastacembelus_armatus
ENSCAFG00020023713	R3HDM2	99	64.581	ENSMZEG00005007319	r3hdm2	95	67.502	Maylandia_zebra
ENSCAFG00020023713	R3HDM2	100	96.884	ENSMICG00000012389	R3HDM2	100	96.884	Microcebus_murinus
ENSCAFG00020023713	R3HDM2	100	93.744	ENSMOCG00000014425	R3hdm2	100	93.744	Microtus_ochrogaster
ENSCAFG00020023713	R3HDM2	95	66.667	ENSMMOG00000007448	r3hdm2	99	66.489	Mola_mola
ENSCAFG00020023713	R3HDM2	85	76.923	ENSMALG00000010211	r3hdm2	97	68.696	Monopterus_albus
ENSCAFG00020023713	R3HDM2	100	94.260	MGP_CAROLIEiJ_G0015896	R3hdm2	100	93.253	Mus_caroli
ENSCAFG00020023713	R3HDM2	100	94.556	ENSMUSG00000025404	R3hdm2	100	93.649	Mus_musculus
ENSCAFG00020023713	R3HDM2	100	93.340	MGP_PahariEiJ_G0031189	R3hdm2	100	93.340	Mus_pahari
ENSCAFG00020023713	R3HDM2	100	94.165	MGP_SPRETEiJ_G0016722	R3hdm2	100	93.763	Mus_spretus
ENSCAFG00020023713	R3HDM2	98	95.618	ENSMPUG00000001818	R3HDM2	97	95.618	Mustela_putorius_furo
ENSCAFG00020023713	R3HDM2	100	95.590	ENSMLUG00000004980	R3HDM2	100	95.590	Myotis_lucifugus
ENSCAFG00020023713	R3HDM2	100	95.762	ENSNGAG00000018800	R3hdm2	100	95.762	Nannospalax_galili
ENSCAFG00020023713	R3HDM2	94	67.134	ENSNBRG00000004483	r3hdm2	99	68.221	Neolamprologus_brichardi
ENSCAFG00020023713	R3HDM2	100	96.670	ENSNLEG00000017351	R3HDM2	100	96.670	Nomascus_leucogenys
ENSCAFG00020023713	R3HDM2	99	81.148	ENSMEUG00000008588	R3HDM2	100	79.904	Notamacropus_eugenii
ENSCAFG00020023713	R3HDM2	100	87.103	ENSOPRG00000013670	R3HDM2	100	87.103	Ochotona_princeps
ENSCAFG00020023713	R3HDM2	99	66.339	ENSONIG00000005075	r3hdm2	95	69.358	Oreochromis_niloticus
ENSCAFG00020023713	R3HDM2	100	94.656	ENSOCUG00000013258	R3HDM2	100	94.656	Oryctolagus_cuniculus
ENSCAFG00020023713	R3HDM2	99	65.367	ENSORLG00000005502	r3hdm2	99	65.056	Oryzias_latipes
ENSCAFG00020023713	R3HDM2	99	65.367	ENSORLG00020017069	r3hdm2	99	65.056	Oryzias_latipes_hni
ENSCAFG00020023713	R3HDM2	99	65.460	ENSORLG00015012735	r3hdm2	99	65.149	Oryzias_latipes_hsok
ENSCAFG00020023713	R3HDM2	99	62.195	ENSOMEG00000018079	r3hdm2	93	65.043	Oryzias_melastigma
ENSCAFG00020023713	R3HDM2	100	95.652	ENSOGAG00000012055	R3HDM2	100	95.652	Otolemur_garnettii
ENSCAFG00020023713	R3HDM2	96	82.950	ENSOGAG00000027966	-	99	81.374	Otolemur_garnettii
ENSCAFG00020023713	R3HDM2	100	96.378	ENSOARG00000006929	R3HDM2	100	96.378	Ovis_aries
ENSCAFG00020023713	R3HDM2	100	96.973	ENSPPAG00000034395	R3HDM2	100	96.973	Pan_paniscus
ENSCAFG00020023713	R3HDM2	100	97.982	ENSPPRG00000009240	R3HDM2	100	97.982	Panthera_pardus
ENSCAFG00020023713	R3HDM2	100	97.982	ENSPTIG00000008752	R3HDM2	100	97.982	Panthera_tigris_altaica
ENSCAFG00020023713	R3HDM2	100	96.973	ENSPTRG00000046457	R3HDM2	100	96.973	Pan_troglodytes
ENSCAFG00020023713	R3HDM2	98	95.581	ENSPANG00000024002	R3HDM2	100	94.368	Papio_anubis
ENSCAFG00020023713	R3HDM2	95	68.966	ENSPKIG00000003171	r3hdm2	97	67.452	Paramormyrops_kingsleyae
ENSCAFG00020023713	R3HDM2	63	72.998	ENSPSIG00000006954	R3HDM2	100	72.998	Pelodiscus_sinensis
ENSCAFG00020023713	R3HDM2	93	69.979	ENSPMGG00000007061	r3hdm2	99	69.124	Periophthalmus_magnuspinnatus
ENSCAFG00020023713	R3HDM2	100	93.145	ENSPEMG00000015964	R3hdm2	100	92.036	Peromyscus_maniculatus_bairdii
ENSCAFG00020023713	R3HDM2	100	90.763	ENSPCIG00000023841	R3HDM2	100	89.157	Phascolarctos_cinereus
ENSCAFG00020023713	R3HDM2	94	81.019	ENSPFOG00000006077	r3hdm2	94	73.740	Poecilia_formosa
ENSCAFG00020023713	R3HDM2	99	64.632	ENSPLAG00000002971	r3hdm2	99	66.417	Poecilia_latipinna
ENSCAFG00020023713	R3HDM2	62	36.282	ENSPMEG00000014457	-	69	41.901	Poecilia_mexicana
ENSCAFG00020023713	R3HDM2	99	64.632	ENSPMEG00000005330	r3hdm2	99	66.417	Poecilia_mexicana
ENSCAFG00020023713	R3HDM2	99	64.852	ENSPREG00000008424	r3hdm2	100	64.920	Poecilia_reticulata
ENSCAFG00020023713	R3HDM2	97	91.632	ENSPPYG00000004685	R3HDM2	81	91.354	Pongo_abelii
ENSCAFG00020023713	R3HDM2	86	97.209	ENSPCAG00000014642	R3HDM2	91	96.198	Procavia_capensis
ENSCAFG00020023713	R3HDM2	100	97.074	ENSPCOG00000013201	R3HDM2	100	97.074	Propithecus_coquereli
ENSCAFG00020023713	R3HDM2	100	95.781	ENSPVAG00000003967	R3HDM2	100	95.781	Pteropus_vampyrus
ENSCAFG00020023713	R3HDM2	94	65.524	ENSPNYG00000013479	r3hdm2	100	66.458	Pundamilia_nyererei
ENSCAFG00020023713	R3HDM2	99	65.331	ENSPNAG00000017473	r3hdm2	95	66.377	Pygocentrus_nattereri
ENSCAFG00020023713	R3HDM2	100	93.454	ENSRNOG00000007801	R3hdm2	100	92.649	Rattus_norvegicus
ENSCAFG00020023713	R3HDM2	100	93.946	ENSRBIG00000037403	R3HDM2	100	93.441	Rhinopithecus_bieti
ENSCAFG00020023713	R3HDM2	100	96.670	ENSRROG00000022271	R3HDM2	100	96.670	Rhinopithecus_roxellana
ENSCAFG00020023713	R3HDM2	100	96.771	ENSSBOG00000023547	R3HDM2	100	96.771	Saimiri_boliviensis_boliviensis
ENSCAFG00020023713	R3HDM2	100	86.667	ENSSHAG00000003511	R3HDM2	99	91.260	Sarcophilus_harrisii
ENSCAFG00020023713	R3HDM2	94	71.626	ENSSFOG00015011219	r3hdm2	99	69.958	Scleropages_formosus
ENSCAFG00020023713	R3HDM2	99	65.327	ENSSMAG00000012073	r3hdm2	100	67.822	Scophthalmus_maximus
ENSCAFG00020023713	R3HDM2	99	66.376	ENSSDUG00000019269	r3hdm2	100	68.216	Seriola_dumerili
ENSCAFG00020023713	R3HDM2	99	66.451	ENSSLDG00000005252	r3hdm2	100	68.113	Seriola_lalandi_dorsalis
ENSCAFG00020023713	R3HDM2	93	90.406	ENSSARG00000003958	R3HDM2	94	90.406	Sorex_araneus
ENSCAFG00020023713	R3HDM2	100	79.106	ENSSPUG00000014132	R3HDM2	100	78.523	Sphenodon_punctatus
ENSCAFG00020023713	R3HDM2	99	66.052	ENSSPAG00000022594	r3hdm2	100	69.053	Stegastes_partitus
ENSCAFG00020023713	R3HDM2	100	97.376	ENSSSCG00000026498	R3HDM2	100	97.376	Sus_scrofa
ENSCAFG00020023713	R3HDM2	73	79.504	ENSTGUG00000015881	R3HDM2	100	78.562	Taeniopygia_guttata
ENSCAFG00020023713	R3HDM2	94	66.453	ENSTRUG00000015075	r3hdm2	99	66.132	Takifugu_rubripes
ENSCAFG00020023713	R3HDM2	91	78.448	ENSTNIG00000007057	r3hdm2	88	81.034	Tetraodon_nigroviridis
ENSCAFG00020023713	R3HDM2	81	97.849	ENSTBEG00000015967	R3HDM2	81	97.849	Tupaia_belangeri
ENSCAFG00020023713	R3HDM2	96	92.291	ENSTTRG00000013082	R3HDM2	93	92.291	Tursiops_truncatus
ENSCAFG00020023713	R3HDM2	100	98.385	ENSUAMG00000020913	R3HDM2	100	95.965	Ursus_americanus
ENSCAFG00020023713	R3HDM2	100	94.361	ENSUMAG00000019179	R3HDM2	100	94.361	Ursus_maritimus
ENSCAFG00020023713	R3HDM2	95	96.355	ENSVPAG00000008656	R3HDM2	94	96.355	Vicugna_pacos
ENSCAFG00020023713	R3HDM2	98	97.852	ENSVVUG00000018014	R3HDM2	97	97.852	Vulpes_vulpes
ENSCAFG00020023713	R3HDM2	100	74.122	ENSXETG00000017153	r3hdm2	92	81.852	Xenopus_tropicalis
ENSCAFG00020023713	R3HDM2	86	65.698	ENSXCOG00000013882	r3hdm2	100	66.047	Xiphophorus_couchianus
ENSCAFG00020023713	R3HDM2	99	65.032	ENSXMAG00000017978	r3hdm2	100	66.279	Xiphophorus_maculatus
ENSCAFG00020023713	R3HDM2	62	36.582	ENSXMAG00000002994	-	88	35.843	Xiphophorus_maculatus