EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020023804 (Gene tree)
Gene ID: 112654697
Gene Symbol: APAF1
Alias: APAF-1|CED4
Full Name: apoptotic peptidase activating factor 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 82306 bases
Position: chrQKWQ01001620.1:20815763-20898068
Accession: 112654697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020030978	eIF2A	PF08662.11	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020035774	APAF1-205	3516	-	ENSCAFP00020030982	1171 (aa)	-	-
ENSCAFT00020035775	APAF1-206	3498	-	ENSCAFP00020030983	1165 (aa)	-	UPI00005A2E62
ENSCAFT00020035769	APAF1-203	3696	-	ENSCAFP00020030978	1231 (aa)	-	-
ENSCAFT00020035773	APAF1-204	3624	-	ENSCAFP00020030981	1207 (aa)	-	UPI00005A2E64
ENSCAFT00020035763	APAF1-202	3720	-	ENSCAFP00020030973	1239 (aa)	-	-
ENSCAFT00020035760	APAF1-201	3753	-	ENSCAFP00020030970	1250 (aa)	XP_025295084	UPI00004BC3F3

Gene Model

Click here to download ENSCAFG00020023804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020023804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020023804	APAF1	53	31.638	ENSCAFG00020016403	POC1B	59	31.638
ENSCAFG00020023804	APAF1	53	33.523	ENSCAFG00020022379	POC1A	71	33.523

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020023804	APAF1	100	85.612	ENSCGRG00001019923	Apaf1	100	85.691	Cricetulus_griseus_chok1gshd
ENSCAFG00020023804	APAF1	100	89.528	ENSDNOG00000011420	APAF1	100	90.787	Dasypus_novemcinctus
ENSCAFG00020023804	APAF1	100	85.989	ENSJJAG00000014169	Apaf1	100	85.989	Jaculus_jaculus
ENSCAFG00020023804	APAF1	100	69.402	ENSMGAG00000011573	APAF1	99	69.402	Meleagris_gallopavo
ENSCAFG00020023804	APAF1	94	79.560	ENSPCAG00000005560	APAF1	94	79.560	Procavia_capensis
ENSCAFG00020023804	APAF1	99	70.376	ENSTGUG00000008761	APAF1	99	70.376	Taeniopygia_guttata
ENSCAFG00020023804	APAF1	100	93.530	ENSVVUG00000018651	APAF1	100	94.169	Vulpes_vulpes