EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020024075 (Gene tree)
Gene ID: 112653417
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 11032 bases
Position: chrQKWQ01000898.1:56395228-56406259
Accession: 112653417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020030869	LSM	PF01423.22	8.4e-20	1	1
ENSCAFP00020030867	LSM	PF01423.22	1.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020035619	SNRPN-202	962	-	ENSCAFP00020030867	266 (aa)	-	-
ENSCAFT00020035621	SNRPN-203	927	-	ENSCAFP00020030869	240 (aa)	XP_025293351	UPI00004A41C3
ENSCAFT00020035617	SNRPN-201	1126	-	ENSCAFP00020030865	268 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020024075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020024075's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020024075	SNRPN	92	92.308	ENSCAFG00020016981	-	92	92.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020024075	SNRPN	100	99.583	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSCAFG00020024075	SNRPN	99	100.000	ENSAMEG00000007034	SNRPN	98	100.000	Ailuropoda_melanoleuca
ENSCAFG00020024075	SNRPN	100	99.583	ENSANAG00000034241	SNRPN	100	99.583	Aotus_nancymaae
ENSCAFG00020024075	SNRPN	100	99.167	ENSBTAG00000008251	SNRPN	100	99.167	Bos_taurus
ENSCAFG00020024075	SNRPN	100	99.583	ENSCJAG00000003759	-	100	99.583	Callithrix_jacchus
ENSCAFG00020024075	SNRPN	95	99.123	ENSCJAG00000042622	-	95	99.123	Callithrix_jacchus
ENSCAFG00020024075	SNRPN	100	100.000	ENSCAFG00000010127	SNRPN	100	100.000	Canis_familiaris
ENSCAFG00020024075	SNRPN	100	99.167	ENSCHIG00000017477	SNRPN	100	99.167	Capra_hircus
ENSCAFG00020024075	SNRPN	100	99.583	ENSTSYG00000005248	SNRPN	100	99.583	Carlito_syrichta
ENSCAFG00020024075	SNRPN	100	99.583	ENSCAPG00000003047	SNRPN	100	99.583	Cavia_aperea
ENSCAFG00020024075	SNRPN	100	99.583	ENSCPOG00000020270	SNRPN	100	99.583	Cavia_porcellus
ENSCAFG00020024075	SNRPN	100	99.583	ENSCCAG00000024231	SNRPN	100	99.583	Cebus_capucinus
ENSCAFG00020024075	SNRPN	100	99.583	ENSCATG00000032518	SNRPN	100	99.583	Cercocebus_atys
ENSCAFG00020024075	SNRPN	100	99.583	ENSCLAG00000011376	SNRPN	100	99.583	Chinchilla_lanigera
ENSCAFG00020024075	SNRPN	100	99.583	ENSCSAG00000006406	SNRPN	100	99.583	Chlorocebus_sabaeus
ENSCAFG00020024075	SNRPN	98	98.291	ENSCHOG00000001846	SNRPN	88	98.291	Choloepus_hoffmanni
ENSCAFG00020024075	SNRPN	100	99.583	ENSCANG00000041156	SNRPN	100	99.583	Colobus_angolensis_palliatus
ENSCAFG00020024075	SNRPN	100	99.167	ENSCGRG00001004136	Snrpn	100	99.167	Cricetulus_griseus_chok1gshd
ENSCAFG00020024075	SNRPN	100	98.750	ENSCGRG00000001621	Snrpn	100	98.750	Cricetulus_griseus_crigri
ENSCAFG00020024075	SNRPN	72	92.486	ENSCVAG00000014193	SNRPN	69	92.857	Cyprinodon_variegatus
ENSCAFG00020024075	SNRPN	99	98.745	ENSDNOG00000037060	SNRPN	98	98.745	Dasypus_novemcinctus
ENSCAFG00020024075	SNRPN	100	99.167	ENSDORG00000004527	Snrpn	100	99.167	Dipodomys_ordii
ENSCAFG00020024075	SNRPN	100	100.000	ENSEASG00005017871	SNRPN	100	100.000	Equus_asinus_asinus
ENSCAFG00020024075	SNRPN	100	100.000	ENSECAG00000018148	SNRPN	100	100.000	Equus_caballus
ENSCAFG00020024075	SNRPN	99	99.163	ENSEEUG00000007440	-	100	99.163	Erinaceus_europaeus
ENSCAFG00020024075	SNRPN	100	100.000	ENSFCAG00000022298	-	100	100.000	Felis_catus
ENSCAFG00020024075	SNRPN	76	85.792	ENSFDAG00000010528	-	86	83.333	Fukomys_damarensis
ENSCAFG00020024075	SNRPN	100	99.167	ENSFDAG00000016578	-	100	99.167	Fukomys_damarensis
ENSCAFG00020024075	SNRPN	75	76.243	ENSGMOG00000018161	SNRPN	93	73.239	Gadus_morhua
ENSCAFG00020024075	SNRPN	90	73.023	ENSGGOG00000024469	-	93	74.634	Gorilla_gorilla
ENSCAFG00020024075	SNRPN	100	99.583	ENSGGOG00000003988	SNRPN	100	99.583	Gorilla_gorilla
ENSCAFG00020024075	SNRPN	100	99.583	ENSHGLG00000011924	SNRPN	100	99.583	Heterocephalus_glaber_female
ENSCAFG00020024075	SNRPN	90	80.930	ENSHGLG00000020936	-	88	80.282	Heterocephalus_glaber_female
ENSCAFG00020024075	SNRPN	89	90.141	ENSHGLG00000019812	-	92	90.950	Heterocephalus_glaber_female
ENSCAFG00020024075	SNRPN	100	85.000	ENSHGLG00000002327	-	92	85.068	Heterocephalus_glaber_female
ENSCAFG00020024075	SNRPN	100	99.583	ENSHGLG00100016559	SNRPN	100	99.583	Heterocephalus_glaber_male
ENSCAFG00020024075	SNRPN	89	90.141	ENSHGLG00100021056	-	92	90.950	Heterocephalus_glaber_male
ENSCAFG00020024075	SNRPN	100	82.500	ENSHGLG00100004881	-	92	83.258	Heterocephalus_glaber_male
ENSCAFG00020024075	SNRPN	100	99.583	ENSSTOG00000001339	SNRPN	100	99.583	Ictidomys_tridecemlineatus
ENSCAFG00020024075	SNRPN	99	99.163	ENSLAFG00000009458	SNRPN	99	99.163	Loxodonta_africana
ENSCAFG00020024075	SNRPN	100	99.583	ENSMFAG00000042235	SNRPN	100	99.583	Macaca_fascicularis
ENSCAFG00020024075	SNRPN	100	99.583	ENSMMUG00000023139	SNURF	100	99.583	Macaca_mulatta
ENSCAFG00020024075	SNRPN	100	99.583	ENSMNEG00000031291	SNRPN	100	99.583	Macaca_nemestrina
ENSCAFG00020024075	SNRPN	100	99.583	ENSMLEG00000038837	SNRPN	100	99.583	Mandrillus_leucophaeus
ENSCAFG00020024075	SNRPN	92	85.455	ENSMGAG00000008696	SNRPN	89	90.187	Meleagris_gallopavo
ENSCAFG00020024075	SNRPN	100	99.583	ENSMAUG00000000051	Snrpn	100	99.583	Mesocricetus_auratus
ENSCAFG00020024075	SNRPN	100	99.583	ENSMICG00000042356	SNRPN	100	99.583	Microcebus_murinus
ENSCAFG00020024075	SNRPN	100	99.583	ENSMOCG00000015350	Snrpn	100	99.583	Microtus_ochrogaster
ENSCAFG00020024075	SNRPN	92	93.665	ENSMODG00000013926	-	92	93.665	Monodelphis_domestica
ENSCAFG00020024075	SNRPN	100	99.583	MGP_CAROLIEiJ_G0029815	Snrpn	100	99.583	Mus_caroli
ENSCAFG00020024075	SNRPN	100	99.583	ENSMUSG00000102252	Snrpn	100	99.583	Mus_musculus
ENSCAFG00020024075	SNRPN	100	99.583	MGP_PahariEiJ_G0013040	Snrpn	100	99.583	Mus_pahari
ENSCAFG00020024075	SNRPN	100	99.583	MGP_SPRETEiJ_G0030918	Snrpn	100	99.583	Mus_spretus
ENSCAFG00020024075	SNRPN	88	50.711	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSCAFG00020024075	SNRPN	100	100.000	ENSMPUG00000014638	-	100	100.000	Mustela_putorius_furo
ENSCAFG00020024075	SNRPN	99	99.582	ENSMLUG00000023361	-	98	99.582	Myotis_lucifugus
ENSCAFG00020024075	SNRPN	95	61.842	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSCAFG00020024075	SNRPN	85	60.784	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSCAFG00020024075	SNRPN	100	99.583	ENSNGAG00000000181	Snrpn	100	99.583	Nannospalax_galili
ENSCAFG00020024075	SNRPN	100	83.333	ENSNLEG00000001376	SNRPN	99	83.333	Nomascus_leucogenys
ENSCAFG00020024075	SNRPN	98	81.624	ENSODEG00000016065	-	87	82.609	Octodon_degus
ENSCAFG00020024075	SNRPN	100	99.167	ENSODEG00000013478	-	100	99.167	Octodon_degus
ENSCAFG00020024075	SNRPN	100	95.417	ENSODEG00000019708	-	93	98.649	Octodon_degus
ENSCAFG00020024075	SNRPN	100	98.750	ENSODEG00000020110	-	100	98.750	Octodon_degus
ENSCAFG00020024075	SNRPN	100	99.170	ENSOCUG00000003532	-	100	99.170	Oryctolagus_cuniculus
ENSCAFG00020024075	SNRPN	73	92.045	ENSORLG00020007490	SNRPN	69	93.452	Oryzias_latipes_hni
ENSCAFG00020024075	SNRPN	73	92.045	ENSORLG00015003332	SNRPN	69	93.452	Oryzias_latipes_hsok
ENSCAFG00020024075	SNRPN	73	92.614	ENSOMEG00000002066	SNRPN	69	94.048	Oryzias_melastigma
ENSCAFG00020024075	SNRPN	100	99.583	ENSOGAG00000007392	SNRPN	100	99.583	Otolemur_garnettii
ENSCAFG00020024075	SNRPN	100	99.167	ENSOARG00000009080	SNRPN	100	99.167	Ovis_aries
ENSCAFG00020024075	SNRPN	100	99.583	ENSPPAG00000027650	SNRPN	100	99.583	Pan_paniscus
ENSCAFG00020024075	SNRPN	97	68.803	ENSPPAG00000034049	-	86	71.770	Pan_paniscus
ENSCAFG00020024075	SNRPN	85	64.390	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSCAFG00020024075	SNRPN	100	100.000	ENSPPRG00000019878	-	100	100.000	Panthera_pardus
ENSCAFG00020024075	SNRPN	100	99.583	ENSPTIG00000004537	SNRPN	100	99.583	Panthera_tigris_altaica
ENSCAFG00020024075	SNRPN	97	69.231	ENSPTRG00000052400	-	63	82.734	Pan_troglodytes
ENSCAFG00020024075	SNRPN	100	99.583	ENSPTRG00000006826	SNRPN	100	99.583	Pan_troglodytes
ENSCAFG00020024075	SNRPN	100	99.583	ENSPANG00000020142	SNRPN	100	99.583	Papio_anubis
ENSCAFG00020024075	SNRPN	95	95.175	ENSPEMG00000020979	-	95	95.175	Peromyscus_maniculatus_bairdii
ENSCAFG00020024075	SNRPN	100	99.583	ENSPEMG00000012911	-	100	99.583	Peromyscus_maniculatus_bairdii
ENSCAFG00020024075	SNRPN	92	86.425	ENSPEMG00000013920	-	91	86.878	Peromyscus_maniculatus_bairdii
ENSCAFG00020024075	SNRPN	92	94.545	ENSPCIG00000004699	-	71	94.118	Phascolarctos_cinereus
ENSCAFG00020024075	SNRPN	72	92.486	ENSPMEG00000020674	SNRPN	69	93.452	Poecilia_mexicana
ENSCAFG00020024075	SNRPN	100	99.583	ENSPPYG00000006269	SNURF	100	99.583	Pongo_abelii
ENSCAFG00020024075	SNRPN	100	99.583	ENSPCOG00000014231	SNRPN	100	99.583	Propithecus_coquereli
ENSCAFG00020024075	SNRPN	100	99.583	ENSRNOG00000059764	Snrpn	100	99.583	Rattus_norvegicus
ENSCAFG00020024075	SNRPN	100	99.583	ENSRBIG00000041765	SNRPN	100	99.583	Rhinopithecus_bieti
ENSCAFG00020024075	SNRPN	100	99.583	ENSRROG00000035157	SNRPN	100	99.583	Rhinopithecus_roxellana
ENSCAFG00020024075	SNRPN	100	98.750	ENSSBOG00000024929	-	100	98.750	Saimiri_boliviensis_boliviensis
ENSCAFG00020024075	SNRPN	100	99.583	ENSSBOG00000000110	-	100	99.583	Saimiri_boliviensis_boliviensis
ENSCAFG00020024075	SNRPN	92	94.118	ENSSHAG00000010257	-	91	94.118	Sarcophilus_harrisii
ENSCAFG00020024075	SNRPN	99	78.243	ENSSARG00000000072	SNRPN	100	78.243	Sorex_araneus
ENSCAFG00020024075	SNRPN	100	99.583	ENSSSCG00000028124	SNRPN	100	99.583	Sus_scrofa
ENSCAFG00020024075	SNRPN	100	99.167	ENSTTRG00000010966	SNRPN	89	99.167	Tursiops_truncatus
ENSCAFG00020024075	SNRPN	93	100.000	ENSUAMG00000016284	SNRPN	88	94.841	Ursus_americanus
ENSCAFG00020024075	SNRPN	100	100.000	ENSUMAG00000025589	SNRPN	100	100.000	Ursus_maritimus
ENSCAFG00020024075	SNRPN	95	100.000	ENSVVUG00000017971	SNRPN	97	100.000	Vulpes_vulpes