EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020024265 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 1332 bases
Position: chrQKWQ01001577.1:75655380-75656711
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020031097	RRM_1	PF00076.22	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020035899	-	372	-	ENSCAFP00020031097	123 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020024265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020024265's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020024265	-	60	64.865	ENSCAFG00020011358	-	84	64.865
ENSCAFG00020024265	-	59	34.722	ENSCAFG00020025576	SF3B6	50	34.328
ENSCAFG00020024265	-	68	95.238	ENSCAFG00020014898	SNRPA	86	95.238
ENSCAFG00020024265	-	72	88.764	ENSCAFG00020017913	-	85	95.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020024265	-	67	95.122	ENSG00000077312	SNRPA	97	94.048	Homo_sapiens
ENSCAFG00020024265	-	61	70.667	ENSAPOG00000014688	-	79	69.737	Acanthochromis_polyacanthus
ENSCAFG00020024265	-	61	70.667	ENSAPOG00000015161	snrpb2	79	69.737	Acanthochromis_polyacanthus
ENSCAFG00020024265	-	67	92.683	ENSCJAG00000045570	-	96	87.640	Callithrix_jacchus
ENSCAFG00020024265	-	67	98.795	ENSCAFG00000031370	-	50	98.795	Canis_familiaris
ENSCAFG00020024265	-	67	95.122	ENSCATG00000032716	SNRPA	88	94.048	Cercocebus_atys
ENSCAFG00020024265	-	67	95.122	ENSCANG00000038637	SNRPA	88	91.860	Colobus_angolensis_palliatus
ENSCAFG00020024265	-	67	95.122	ENSMFAG00000041710	SNRPA	88	94.048	Macaca_fascicularis
ENSCAFG00020024265	-	67	95.122	ENSMMUG00000022024	SNRPA	93	90.909	Macaca_mulatta
ENSCAFG00020024265	-	67	95.122	ENSMLEG00000039593	SNRPA	88	94.048	Mandrillus_leucophaeus
ENSCAFG00020024265	-	61	69.333	MGP_CAROLIEiJ_G0024372	Snrpb2	52	69.333	Mus_caroli
ENSCAFG00020024265	-	61	69.333	ENSMUSG00000008333	Snrpb2	52	69.333	Mus_musculus
ENSCAFG00020024265	-	61	69.333	MGP_PahariEiJ_G0025817	Snrpb2	52	69.333	Mus_pahari
ENSCAFG00020024265	-	61	69.333	MGP_SPRETEiJ_G0025291	Snrpb2	52	69.333	Mus_spretus
ENSCAFG00020024265	-	73	88.889	ENSODEG00000000626	-	83	93.902	Octodon_degus
ENSCAFG00020024265	-	67	95.122	ENSPANG00000023874	SNRPA	88	94.048	Papio_anubis
ENSCAFG00020024265	-	67	95.122	ENSPCOG00000025196	SNRPA	86	91.860	Propithecus_coquereli
ENSCAFG00020024265	-	67	95.122	ENSRBIG00000008335	SNRPA	88	91.860	Rhinopithecus_bieti
ENSCAFG00020024265	-	67	95.122	ENSRROG00000042727	SNRPA	88	91.860	Rhinopithecus_roxellana
ENSCAFG00020024265	-	67	35.366	YIR009W	MSL1	73	35.366	Saccharomyces_cerevisiae
ENSCAFG00020024265	-	67	95.122	ENSSBOG00000034722	SNRPA	60	94.048	Saimiri_boliviensis_boliviensis
ENSCAFG00020024265	-	70	90.698	ENSUAMG00000003002	-	93	90.698	Ursus_americanus
ENSCAFG00020024265	-	70	55.814	ENSUMAG00000000069	-	64	55.814	Ursus_maritimus
ENSCAFG00020024265	-	91	94.643	ENSVVUG00000014183	-	100	94.643	Vulpes_vulpes
ENSCAFG00020024265	-	68	95.238	ENSVVUG00000005647	SNRPA	86	95.238	Vulpes_vulpes
ENSCAFG00020024265	-	74	48.352	ENSXCOG00000012134	-	87	53.659	Xiphophorus_couchianus