EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020024272 (Gene tree)
Gene ID: 112648115
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 11854 bases
Position: chrQKWQ01001577.1:75822758-75834611
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020031107	MBD	PF01429.19	3.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020035909	MBD1-201	1929	-	ENSCAFP00020031107	642 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020024272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020024272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020024272	MBD1	97	86.998	ENSG00000141644	MBD1	99	86.196	Homo_sapiens
ENSCAFG00020024272	MBD1	97	94.551	ENSAMEG00000000238	MBD1	95	94.551	Ailuropoda_melanoleuca
ENSCAFG00020024272	MBD1	52	41.129	ENSACIG00000010590	mbd1b	52	30.165	Amphilophus_citrinellus
ENSCAFG00020024272	MBD1	63	44.552	ENSACAG00000006091	-	100	44.552	Anolis_carolinensis
ENSCAFG00020024272	MBD1	97	85.875	ENSANAG00000036253	MBD1	99	85.072	Aotus_nancymaae
ENSCAFG00020024272	MBD1	98	87.599	ENSBTAG00000003801	MBD1	99	87.500	Bos_taurus
ENSCAFG00020024272	MBD1	97	84.409	ENSCJAG00000004959	MBD1	99	83.622	Callithrix_jacchus
ENSCAFG00020024272	MBD1	97	99.358	ENSCAFG00000018928	MBD1	95	99.358	Canis_familiaris
ENSCAFG00020024272	MBD1	97	87.821	ENSCHIG00000021134	MBD1	99	87.340	Capra_hircus
ENSCAFG00020024272	MBD1	97	86.035	ENSTSYG00000000509	MBD1	99	85.233	Carlito_syrichta
ENSCAFG00020024272	MBD1	100	62.112	ENSCAPG00000015782	MBD1	100	61.491	Cavia_aperea
ENSCAFG00020024272	MBD1	100	68.467	ENSCPOG00000001671	MBD1	96	71.723	Cavia_porcellus
ENSCAFG00020024272	MBD1	97	80.032	ENSCCAG00000034600	MBD1	99	74.318	Cebus_capucinus
ENSCAFG00020024272	MBD1	97	86.998	ENSCATG00000029959	MBD1	99	86.196	Cercocebus_atys
ENSCAFG00020024272	MBD1	97	83.146	ENSCLAG00000007457	MBD1	87	82.504	Chinchilla_lanigera
ENSCAFG00020024272	MBD1	97	83.307	ENSCSAG00000018070	MBD1	99	82.504	Chlorocebus_sabaeus
ENSCAFG00020024272	MBD1	97	86.998	ENSCANG00000033425	MBD1	99	86.196	Colobus_angolensis_palliatus
ENSCAFG00020024272	MBD1	100	71.229	ENSCGRG00001014843	Mbd1	100	70.762	Cricetulus_griseus_chok1gshd
ENSCAFG00020024272	MBD1	100	52.462	ENSCGRG00000014135	Mbd1	100	56.366	Cricetulus_griseus_crigri
ENSCAFG00020024272	MBD1	100	81.308	ENSDNOG00000015998	MBD1	100	82.399	Dasypus_novemcinctus
ENSCAFG00020024272	MBD1	92	72.159	ENSDORG00000013917	Mbd1	100	72.159	Dipodomys_ordii
ENSCAFG00020024272	MBD1	100	90.980	ENSEASG00005003857	MBD1	100	91.135	Equus_asinus_asinus
ENSCAFG00020024272	MBD1	100	90.824	ENSECAG00000011497	MBD1	81	90.980	Equus_caballus
ENSCAFG00020024272	MBD1	67	32.727	ENSELUG00000004375	mbd1b	51	33.036	Esox_lucius
ENSCAFG00020024272	MBD1	100	95.179	ENSFCAG00000015730	MBD1	99	94.551	Felis_catus
ENSCAFG00020024272	MBD1	98	69.731	ENSFDAG00000011085	MBD1	97	69.097	Fukomys_damarensis
ENSCAFG00020024272	MBD1	69	30.090	ENSGACG00000012106	-	70	32.609	Gasterosteus_aculeatus
ENSCAFG00020024272	MBD1	97	86.998	ENSGGOG00000016966	MBD1	99	86.196	Gorilla_gorilla
ENSCAFG00020024272	MBD1	97	83.467	ENSHGLG00000008740	MBD1	99	82.825	Heterocephalus_glaber_female
ENSCAFG00020024272	MBD1	90	87.261	ENSHGLG00100005198	MBD1	98	85.366	Heterocephalus_glaber_male
ENSCAFG00020024272	MBD1	100	78.374	ENSSTOG00000007780	MBD1	100	77.914	Ictidomys_tridecemlineatus
ENSCAFG00020024272	MBD1	100	64.961	ENSJJAG00000022859	Mbd1	100	65.116	Jaculus_jaculus
ENSCAFG00020024272	MBD1	65	39.141	ENSLACG00000002414	-	58	38.663	Latimeria_chalumnae
ENSCAFG00020024272	MBD1	100	74.034	ENSLAFG00000031328	MBD1	100	74.652	Loxodonta_africana
ENSCAFG00020024272	MBD1	97	86.677	ENSMFAG00000026335	MBD1	99	85.875	Macaca_fascicularis
ENSCAFG00020024272	MBD1	97	86.677	ENSMMUG00000009050	MBD1	99	85.875	Macaca_mulatta
ENSCAFG00020024272	MBD1	97	86.677	ENSMNEG00000038822	MBD1	99	85.875	Macaca_nemestrina
ENSCAFG00020024272	MBD1	97	86.838	ENSMLEG00000043121	MBD1	99	86.035	Mandrillus_leucophaeus
ENSCAFG00020024272	MBD1	97	84.615	ENSMICG00000006414	MBD1	99	84.615	Microcebus_murinus
ENSCAFG00020024272	MBD1	100	65.082	ENSMUSG00000024561	Mbd1	100	64.487	Mus_musculus
ENSCAFG00020024272	MBD1	97	64.451	MGP_PahariEiJ_G0019128	Mbd1	99	64.760	Mus_pahari
ENSCAFG00020024272	MBD1	96	65.421	MGP_SPRETEiJ_G0023304	Mbd1	99	64.798	Mus_spretus
ENSCAFG00020024272	MBD1	97	93.750	ENSMPUG00000008843	MBD1	95	93.750	Mustela_putorius_furo
ENSCAFG00020024272	MBD1	97	88.443	ENSMLUG00000008286	MBD1	95	87.640	Myotis_lucifugus
ENSCAFG00020024272	MBD1	100	64.122	ENSNGAG00000011412	Mbd1	100	63.664	Nannospalax_galili
ENSCAFG00020024272	MBD1	97	85.875	ENSNLEG00000011661	-	99	85.072	Nomascus_leucogenys
ENSCAFG00020024272	MBD1	97	66.345	ENSNLEG00000032711	-	89	61.514	Nomascus_leucogenys
ENSCAFG00020024272	MBD1	97	69.502	ENSOPRG00000007647	MBD1	99	69.502	Ochotona_princeps
ENSCAFG00020024272	MBD1	100	67.907	ENSODEG00000018451	MBD1	100	69.470	Octodon_degus
ENSCAFG00020024272	MBD1	84	44.700	ENSOANG00000014593	-	100	46.454	Ornithorhynchus_anatinus
ENSCAFG00020024272	MBD1	97	82.825	ENSOCUG00000006554	MBD1	99	82.825	Oryctolagus_cuniculus
ENSCAFG00020024272	MBD1	97	84.177	ENSOGAG00000003784	MBD1	95	84.177	Otolemur_garnettii
ENSCAFG00020024272	MBD1	97	87.840	ENSOARG00000004218	MBD1	94	87.360	Ovis_aries
ENSCAFG00020024272	MBD1	97	83.414	ENSPPAG00000038886	MBD1	99	82.504	Pan_paniscus
ENSCAFG00020024272	MBD1	97	94.712	ENSPPRG00000021387	MBD1	99	94.712	Panthera_pardus
ENSCAFG00020024272	MBD1	97	94.551	ENSPTIG00000021231	MBD1	99	94.551	Panthera_tigris_altaica
ENSCAFG00020024272	MBD1	97	86.838	ENSPTRG00000010021	MBD1	99	86.035	Pan_troglodytes
ENSCAFG00020024272	MBD1	97	86.677	ENSPANG00000010867	MBD1	99	85.875	Papio_anubis
ENSCAFG00020024272	MBD1	100	58.610	ENSPEMG00000022630	Mbd1	100	58.308	Peromyscus_maniculatus_bairdii
ENSCAFG00020024272	MBD1	95	46.508	ENSPCIG00000027937	-	79	46.508	Phascolarctos_cinereus
ENSCAFG00020024272	MBD1	97	83.307	ENSPPYG00000009158	MBD1	90	82.504	Pongo_abelii
ENSCAFG00020024272	MBD1	97	71.589	ENSPCAG00000001648	MBD1	92	87.500	Procavia_capensis
ENSCAFG00020024272	MBD1	98	83.201	ENSPCOG00000012450	MBD1	99	84.109	Propithecus_coquereli
ENSCAFG00020024272	MBD1	100	46.757	ENSRNOG00000024104	Mbd1	100	50.303	Rattus_norvegicus
ENSCAFG00020024272	MBD1	97	79.936	ENSRBIG00000041294	MBD1	99	79.133	Rhinopithecus_bieti
ENSCAFG00020024272	MBD1	97	86.356	ENSRROG00000032517	MBD1	99	85.554	Rhinopithecus_roxellana
ENSCAFG00020024272	MBD1	97	84.277	ENSSBOG00000027169	MBD1	99	75.281	Saimiri_boliviensis_boliviensis
ENSCAFG00020024272	MBD1	76	45.122	ENSSHAG00000003661	-	100	45.951	Sarcophilus_harrisii
ENSCAFG00020024272	MBD1	100	87.695	ENSSSCG00000004516	MBD1	100	86.916	Sus_scrofa
ENSCAFG00020024272	MBD1	64	78.059	ENSTBEG00000012651	-	68	78.059	Tupaia_belangeri
ENSCAFG00020024272	MBD1	97	83.013	ENSTTRG00000015523	MBD1	99	83.974	Tursiops_truncatus
ENSCAFG00020024272	MBD1	100	90.031	ENSUAMG00000004752	MBD1	100	91.757	Ursus_americanus
ENSCAFG00020024272	MBD1	98	93.207	ENSUMAG00000002947	MBD1	98	93.207	Ursus_maritimus