EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020024489 (Gene tree)
Gene ID: 112677359
Gene Symbol: SETX
Alias: ALS4|AOA2|KIAA0625|SCAR1|Sen1
Full Name: senataxin
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 72111 bases
Position: chrQKWQ01001968.1:9090010-9162120
Accession: 112677359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020031426	UvrD-helicase	PF00580.21	3.1e-08	1	1
ENSCAFP00020031426	ResIII	PF04851.15	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020036289	SETX-202	2457	-	ENSCAFP00020031426	818 (aa)	-	-
ENSCAFT00020036286	SETX-201	8079	-	ENSCAFP00020031423	2692 (aa)	XP_025331364	UPI000DC6C0FD

Gene Model

Click here to download ENSCAFG00020024489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020024489's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020024489	SETX	100	82.091	ENSG00000107290	SETX	90	80.070	Homo_sapiens
ENSCAFG00020024489	SETX	92	77.325	ENSTSYG00000030808	-	92	77.325	Carlito_syrichta
ENSCAFG00020024489	SETX	100	82.572	ENSGGOG00000027664	SETX	97	80.512	Gorilla_gorilla
ENSCAFG00020024489	SETX	100	81.490	ENSPPAG00000004108	SETX	93	81.795	Pan_paniscus
ENSCAFG00020024489	SETX	100	81.490	ENSPTRG00000021495	SETX	93	81.795	Pan_troglodytes
ENSCAFG00020024489	SETX	96	87.823	ENSUMAG00000016729	SETX	96	87.823	Ursus_maritimus