EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020024881 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 334461 bases
Position: chrQKWQ01001090.1:21080734-21415194
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020031924	Fox-1_C	PF12414.8	1.4e-08	1	1
ENSCAFP00020031924	RRM_1	PF00076.22	3.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020036860	RBFOX1-201	1074	-	ENSCAFP00020031924	357 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020024881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020024881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020024881	RBFOX1	71	64.528	ENSCAFG00020004541	RBFOX2	67	64.151
ENSCAFG00020024881	RBFOX1	68	68.571	ENSCAFG00020008126	RBFOX3	62	68.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020024881	RBFOX1	99	85.823	ENSG00000078328	RBFOX1	97	98.828	Homo_sapiens
ENSCAFG00020024881	RBFOX1	79	67.110	ENSAPOG00000003197	rbfox1	67	68.293	Acanthochromis_polyacanthus
ENSCAFG00020024881	RBFOX1	70	97.200	ENSAMEG00000008605	RBFOX1	100	97.200	Ailuropoda_melanoleuca
ENSCAFG00020024881	RBFOX1	75	69.231	ENSAOCG00000008283	rbfox1	89	68.881	Amphiprion_ocellaris
ENSCAFG00020024881	RBFOX1	76	65.314	ENSAPEG00000010636	rbfox1	69	67.568	Amphiprion_percula
ENSCAFG00020024881	RBFOX1	79	66.007	ENSATEG00000007513	rbfox1	89	66.897	Anabas_testudineus
ENSCAFG00020024881	RBFOX1	76	94.815	ENSAPLG00000013263	RBFOX1	68	94.815	Anas_platyrhynchos
ENSCAFG00020024881	RBFOX1	75	84.502	ENSACAG00000004013	RBFOX1	68	84.502	Anolis_carolinensis
ENSCAFG00020024881	RBFOX1	93	88.920	ENSANAG00000029527	RBFOX1	98	88.636	Aotus_nancymaae
ENSCAFG00020024881	RBFOX1	64	87.281	ENSAMXG00000002431	rbfox1	65	87.281	Astyanax_mexicanus
ENSCAFG00020024881	RBFOX1	92	85.014	ENSBTAG00000007210	RBFOX1	97	84.699	Bos_taurus
ENSCAFG00020024881	RBFOX1	83	98.311	ENSCJAG00000017351	RBFOX1	71	98.311	Callithrix_jacchus
ENSCAFG00020024881	RBFOX1	99	86.582	ENSCAFG00000019082	RBFOX1	100	86.329	Canis_familiaris
ENSCAFG00020024881	RBFOX1	99	86.076	ENSCHIG00000023549	RBFOX1	100	85.823	Capra_hircus
ENSCAFG00020024881	RBFOX1	92	83.060	ENSTSYG00000005334	RBFOX1	100	78.082	Carlito_syrichta
ENSCAFG00020024881	RBFOX1	83	97.297	ENSCAPG00000017669	RBFOX1	71	97.297	Cavia_aperea
ENSCAFG00020024881	RBFOX1	83	97.297	ENSCPOG00000011314	RBFOX1	71	97.297	Cavia_porcellus
ENSCAFG00020024881	RBFOX1	83	98.649	ENSCCAG00000023031	RBFOX1	97	78.202	Cebus_capucinus
ENSCAFG00020024881	RBFOX1	100	85.606	ENSCATG00000033816	RBFOX1	98	88.636	Cercocebus_atys
ENSCAFG00020024881	RBFOX1	99	83.503	ENSCLAG00000012761	RBFOX1	100	83.503	Chinchilla_lanigera
ENSCAFG00020024881	RBFOX1	92	84.153	ENSCSAG00000008739	RBFOX1	97	84.153	Chlorocebus_sabaeus
ENSCAFG00020024881	RBFOX1	76	89.706	ENSCHOG00000012843	RBFOX1	65	89.706	Choloepus_hoffmanni
ENSCAFG00020024881	RBFOX1	92	84.776	ENSCPBG00000026626	RBFOX1	97	85.075	Chrysemys_picta_bellii
ENSCAFG00020024881	RBFOX1	83	98.986	ENSCANG00000033125	RBFOX1	71	98.986	Colobus_angolensis_palliatus
ENSCAFG00020024881	RBFOX1	83	96.959	ENSCGRG00001013729	Rbfox1	71	96.959	Cricetulus_griseus_chok1gshd
ENSCAFG00020024881	RBFOX1	83	96.959	ENSCGRG00000003272	Rbfox1	71	96.959	Cricetulus_griseus_crigri
ENSCAFG00020024881	RBFOX1	72	65.217	ENSCSEG00000008840	rbfox1	67	65.217	Cynoglossus_semilaevis
ENSCAFG00020024881	RBFOX1	75	77.323	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSCAFG00020024881	RBFOX1	75	98.141	ENSDNOG00000043612	RBFOX1	65	98.141	Dasypus_novemcinctus
ENSCAFG00020024881	RBFOX1	75	95.203	ENSDORG00000010024	Rbfox1	70	94.834	Dipodomys_ordii
ENSCAFG00020024881	RBFOX1	83	71.284	ENSETEG00000003771	RBFOX1	71	71.284	Echinops_telfairi
ENSCAFG00020024881	RBFOX1	99	86.329	ENSEASG00005011599	RBFOX1	100	86.076	Equus_asinus_asinus
ENSCAFG00020024881	RBFOX1	99	86.076	ENSECAG00000012667	RBFOX1	100	85.823	Equus_caballus
ENSCAFG00020024881	RBFOX1	100	86.111	ENSFCAG00000025322	RBFOX1	97	84.153	Felis_catus
ENSCAFG00020024881	RBFOX1	75	95.149	ENSFALG00000004027	RBFOX1	80	95.149	Ficedula_albicollis
ENSCAFG00020024881	RBFOX1	83	97.973	ENSFDAG00000007388	RBFOX1	71	97.973	Fukomys_damarensis
ENSCAFG00020024881	RBFOX1	96	81.266	ENSGALG00000034325	RBFOX1	100	81.003	Gallus_gallus
ENSCAFG00020024881	RBFOX1	99	80.457	ENSGAGG00000023681	RBFOX1	100	80.203	Gopherus_agassizii
ENSCAFG00020024881	RBFOX1	83	98.986	ENSGGOG00000016871	-	74	98.519	Gorilla_gorilla
ENSCAFG00020024881	RBFOX1	99	83.756	ENSHGLG00000016944	RBFOX1	100	83.756	Heterocephalus_glaber_female
ENSCAFG00020024881	RBFOX1	99	83.756	ENSHGLG00100003272	RBFOX1	100	83.756	Heterocephalus_glaber_male
ENSCAFG00020024881	RBFOX1	72	69.549	ENSHCOG00000016419	rbfox1	69	69.549	Hippocampus_comes
ENSCAFG00020024881	RBFOX1	93	67.714	ENSIPUG00000015215	rbfox1	97	68.033	Ictalurus_punctatus
ENSCAFG00020024881	RBFOX1	83	96.284	ENSSTOG00000000322	RBFOX1	97	82.787	Ictidomys_tridecemlineatus
ENSCAFG00020024881	RBFOX1	83	92.905	ENSJJAG00000002575	Rbfox1	70	92.905	Jaculus_jaculus
ENSCAFG00020024881	RBFOX1	79	67.698	ENSLBEG00000014659	rbfox1	71	69.675	Labrus_bergylta
ENSCAFG00020024881	RBFOX1	76	83.333	ENSLOCG00000006675	rbfox1	69	83.883	Lepisosteus_oculatus
ENSCAFG00020024881	RBFOX1	52	99.462	ENSLAFG00000011480	RBFOX1	61	98.930	Loxodonta_africana
ENSCAFG00020024881	RBFOX1	83	98.649	ENSMFAG00000036447	RBFOX1	98	82.320	Macaca_fascicularis
ENSCAFG00020024881	RBFOX1	83	98.649	ENSMMUG00000003458	RBFOX1	99	83.924	Macaca_mulatta
ENSCAFG00020024881	RBFOX1	100	84.304	ENSMNEG00000032034	RBFOX1	89	84.304	Macaca_nemestrina
ENSCAFG00020024881	RBFOX1	83	98.986	ENSMLEG00000015382	RBFOX1	71	98.986	Mandrillus_leucophaeus
ENSCAFG00020024881	RBFOX1	75	67.958	ENSMAMG00000003142	rbfox1	89	68.662	Mastacembelus_armatus
ENSCAFG00020024881	RBFOX1	76	88.603	ENSMGAG00000008606	RBFOX1	93	88.603	Meleagris_gallopavo
ENSCAFG00020024881	RBFOX1	86	57.419	ENSMAUG00000020570	Rbfox1	68	63.359	Mesocricetus_auratus
ENSCAFG00020024881	RBFOX1	99	85.316	ENSMICG00000034286	RBFOX1	100	85.063	Microcebus_murinus
ENSCAFG00020024881	RBFOX1	83	96.959	ENSMOCG00000020932	Rbfox1	71	96.959	Microtus_ochrogaster
ENSCAFG00020024881	RBFOX1	76	70.221	ENSMMOG00000009716	rbfox1	67	72.481	Mola_mola
ENSCAFG00020024881	RBFOX1	89	83.616	ENSMODG00000005826	RBFOX1	100	83.333	Monodelphis_domestica
ENSCAFG00020024881	RBFOX1	86	63.720	ENSMALG00000003337	rbfox1	66	69.395	Monopterus_albus
ENSCAFG00020024881	RBFOX1	83	97.297	MGP_CAROLIEiJ_G0020427	Rbfox1	86	82.834	Mus_caroli
ENSCAFG00020024881	RBFOX1	83	96.959	ENSMUSG00000008658	Rbfox1	93	97.026	Mus_musculus
ENSCAFG00020024881	RBFOX1	83	97.297	MGP_PahariEiJ_G0016135	Rbfox1	86	82.561	Mus_pahari
ENSCAFG00020024881	RBFOX1	83	96.622	MGP_SPRETEiJ_G0021321	Rbfox1	86	82.289	Mus_spretus
ENSCAFG00020024881	RBFOX1	99	86.802	ENSMPUG00000014822	RBFOX1	100	85.533	Mustela_putorius_furo
ENSCAFG00020024881	RBFOX1	52	100.000	ENSMLUG00000015896	RBFOX1	61	100.000	Myotis_lucifugus
ENSCAFG00020024881	RBFOX1	83	98.311	ENSNGAG00000023276	Rbfox1	71	98.311	Nannospalax_galili
ENSCAFG00020024881	RBFOX1	83	55.873	ENSNBRG00000011084	rbfox1	68	56.811	Neolamprologus_brichardi
ENSCAFG00020024881	RBFOX1	83	98.649	ENSNLEG00000010017	-	71	98.649	Nomascus_leucogenys
ENSCAFG00020024881	RBFOX1	76	96.679	ENSMEUG00000012525	RBFOX1	65	96.679	Notamacropus_eugenii
ENSCAFG00020024881	RBFOX1	76	97.794	ENSOPRG00000006199	-	65	97.794	Ochotona_princeps
ENSCAFG00020024881	RBFOX1	83	96.284	ENSODEG00000013166	RBFOX1	71	96.284	Octodon_degus
ENSCAFG00020024881	RBFOX1	92	83.333	ENSOANG00000002379	RBFOX1	97	83.060	Ornithorhynchus_anatinus
ENSCAFG00020024881	RBFOX1	61	96.789	ENSOCUG00000001205	-	97	96.789	Oryctolagus_cuniculus
ENSCAFG00020024881	RBFOX1	75	98.513	ENSOGAG00000025535	RBFOX1	68	98.513	Otolemur_garnettii
ENSCAFG00020024881	RBFOX1	70	85.657	ENSOARG00000005135	RBFOX1	100	85.657	Ovis_aries
ENSCAFG00020024881	RBFOX1	92	85.519	ENSPPAG00000036238	-	100	84.973	Pan_paniscus
ENSCAFG00020024881	RBFOX1	83	99.662	ENSPPRG00000006546	RBFOX1	71	99.662	Panthera_pardus
ENSCAFG00020024881	RBFOX1	99	80.992	ENSPTIG00000021154	RBFOX1	99	81.163	Panthera_tigris_altaica
ENSCAFG00020024881	RBFOX1	83	98.986	ENSPTRG00000007744	RBFOX1	71	98.986	Pan_troglodytes
ENSCAFG00020024881	RBFOX1	83	98.986	ENSPANG00000026500	RBFOX1	98	88.636	Papio_anubis
ENSCAFG00020024881	RBFOX1	76	82.051	ENSPKIG00000019353	rbfox1	79	82.156	Paramormyrops_kingsleyae
ENSCAFG00020024881	RBFOX1	92	69.648	ENSPKIG00000009667	-	99	69.648	Paramormyrops_kingsleyae
ENSCAFG00020024881	RBFOX1	75	95.149	ENSPSIG00000006523	RBFOX1	67	95.149	Pelodiscus_sinensis
ENSCAFG00020024881	RBFOX1	83	97.297	ENSPEMG00000017607	Rbfox1	71	97.297	Peromyscus_maniculatus_bairdii
ENSCAFG00020024881	RBFOX1	64	81.226	ENSPCIG00000026887	RBFOX1	85	80.534	Phascolarctos_cinereus
ENSCAFG00020024881	RBFOX1	99	84.772	ENSPPYG00000007079	-	100	84.772	Pongo_abelii
ENSCAFG00020024881	RBFOX1	83	87.500	ENSPCAG00000002630	RBFOX1	78	87.500	Procavia_capensis
ENSCAFG00020024881	RBFOX1	83	98.311	ENSPCOG00000025687	RBFOX1	97	88.184	Propithecus_coquereli
ENSCAFG00020024881	RBFOX1	83	96.622	ENSPVAG00000013467	RBFOX1	71	96.622	Pteropus_vampyrus
ENSCAFG00020024881	RBFOX1	72	76.000	ENSPNAG00000023109	rbfox1	67	76.000	Pygocentrus_nattereri
ENSCAFG00020024881	RBFOX1	83	96.284	ENSRNOG00000002827	Rbfox1	97	83.379	Rattus_norvegicus
ENSCAFG00020024881	RBFOX1	92	85.559	ENSRBIG00000044478	RBFOX1	97	85.014	Rhinopithecus_bieti
ENSCAFG00020024881	RBFOX1	99	85.823	ENSRROG00000044411	RBFOX1	87	98.986	Rhinopithecus_roxellana
ENSCAFG00020024881	RBFOX1	99	85.570	ENSSBOG00000033726	RBFOX1	100	85.316	Saimiri_boliviensis_boliviensis
ENSCAFG00020024881	RBFOX1	75	92.884	ENSSHAG00000009257	RBFOX1	100	76.056	Sarcophilus_harrisii
ENSCAFG00020024881	RBFOX1	80	66.438	ENSSFOG00015009955	-	67	66.438	Scleropages_formosus
ENSCAFG00020024881	RBFOX1	69	82.937	ENSSFOG00015023675	rbfox1	73	82.937	Scleropages_formosus
ENSCAFG00020024881	RBFOX1	79	68.000	ENSSMAG00000015505	rbfox1	72	69.231	Scophthalmus_maximus
ENSCAFG00020024881	RBFOX1	80	69.444	ENSSDUG00000016413	rbfox1	70	71.533	Seriola_dumerili
ENSCAFG00020024881	RBFOX1	79	68.106	ENSSLDG00000009353	rbfox1	82	69.338	Seriola_lalandi_dorsalis
ENSCAFG00020024881	RBFOX1	72	84.556	ENSSPUG00000009732	RBFOX1	65	84.556	Sphenodon_punctatus
ENSCAFG00020024881	RBFOX1	82	68.707	ENSSPAG00000009723	rbfox1	71	69.930	Stegastes_partitus
ENSCAFG00020024881	RBFOX1	100	85.606	ENSSSCG00000007917	RBFOX1	100	83.051	Sus_scrofa
ENSCAFG00020024881	RBFOX1	75	95.149	ENSTGUG00000004562	RBFOX1	69	95.149	Taeniopygia_guttata
ENSCAFG00020024881	RBFOX1	76	68.990	ENSTRUG00000020940	rbfox1	72	68.641	Takifugu_rubripes
ENSCAFG00020024881	RBFOX1	52	60.963	ENSTNIG00000002567	rbfox1	50	60.428	Tetraodon_nigroviridis
ENSCAFG00020024881	RBFOX1	83	98.986	ENSTTRG00000005700	RBFOX1	71	98.986	Tursiops_truncatus
ENSCAFG00020024881	RBFOX1	100	90.476	ENSUAMG00000024633	RBFOX1	100	90.212	Ursus_americanus
ENSCAFG00020024881	RBFOX1	100	88.430	ENSUMAG00000003579	RBFOX1	100	88.430	Ursus_maritimus
ENSCAFG00020024881	RBFOX1	60	100.000	ENSVPAG00000001284	RBFOX1	51	100.000	Vicugna_pacos
ENSCAFG00020024881	RBFOX1	92	84.153	ENSVVUG00000017311	RBFOX1	97	85.246	Vulpes_vulpes