EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020024945 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 6900 bases
Position: chrQKWQ01001090.1:23538101-23545000
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020032015	zf-C2H2	PF00096.26	2.4e-30	1	5
ENSCAFP00020032015	zf-C2H2	PF00096.26	2.4e-30	2	5
ENSCAFP00020032015	zf-C2H2	PF00096.26	2.4e-30	3	5
ENSCAFP00020032015	zf-C2H2	PF00096.26	2.4e-30	4	5
ENSCAFP00020032015	zf-C2H2	PF00096.26	2.4e-30	5	5
ENSCAFP00020032015	zf-met	PF12874.7	0.00049	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020036962	-	1464	-	ENSCAFP00020032015	279 (aa)	-	UPI000274A30C

Gene Model

Click here to download ENSCAFG00020024945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020024945's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020024945	-	77	38.596	ENSCAFG00020006282	ZNF770	83	38.596
ENSCAFG00020024945	-	53	44.928	ENSCAFG00020017685	PRDM5	73	44.928
ENSCAFG00020024945	-	53	41.379	ENSCAFG00020017751	MAZ	50	35.862
ENSCAFG00020024945	-	51	58.156	ENSCAFG00020023428	ZNF846	79	58.156
ENSCAFG00020024945	-	52	42.683	ENSCAFG00020015384	SNAI2	54	42.683
ENSCAFG00020024945	-	82	56.738	ENSCAFG00020009762	ZNF268	91	56.738
ENSCAFG00020024945	-	54	41.667	ENSCAFG00020027463	-	64	41.667
ENSCAFG00020024945	-	58	49.091	ENSCAFG00020015152	ZNF236	53	49.091
ENSCAFG00020024945	-	57	62.411	ENSCAFG00020009015	ZNF112	75	62.411
ENSCAFG00020024945	-	55	44.681	ENSCAFG00020021877	ZFP64	69	44.681
ENSCAFG00020024945	-	80	58.772	ENSCAFG00020014973	ZNF551	99	58.772
ENSCAFG00020024945	-	56	58.163	ENSCAFG00020005083	-	97	58.163
ENSCAFG00020024945	-	86	56.028	ENSCAFG00020003589	-	99	56.028
ENSCAFG00020024945	-	59	60.993	ENSCAFG00020013058	ZNF235	70	60.993
ENSCAFG00020024945	-	51	53.333	ENSCAFG00020023398	ZNF317	93	53.333
ENSCAFG00020024945	-	51	53.901	ENSCAFG00020019138	ZNF175	76	53.901
ENSCAFG00020024945	-	63	45.833	ENSCAFG00020009237	ZNF319	91	45.833
ENSCAFG00020024945	-	51	60.241	ENSCAFG00020017854	ZNF768	51	60.241
ENSCAFG00020024945	-	54	52.482	ENSCAFG00020005065	-	97	52.482
ENSCAFG00020024945	-	58	60.993	ENSCAFG00020015138	ZNF71	82	60.993
ENSCAFG00020024945	-	51	46.552	ENSCAFG00020015473	ZNF865	60	46.552
ENSCAFG00020024945	-	58	55.319	ENSCAFG00020014940	-	94	55.319
ENSCAFG00020024945	-	51	57.895	ENSCAFG00020013111	-	76	57.895
ENSCAFG00020024945	-	71	50.602	ENSCAFG00020015470	ZNF784	87	50.602
ENSCAFG00020024945	-	62	58.865	ENSCAFG00020013066	ZNF226	85	58.865
ENSCAFG00020024945	-	79	48.529	ENSCAFG00020025815	ZNF200	67	48.529
ENSCAFG00020024945	-	53	53.901	ENSCAFG00020021363	ZNF81	72	53.901
ENSCAFG00020024945	-	79	56.738	ENSCAFG00020001547	ZFP1	98	56.738
ENSCAFG00020024945	-	51	64.935	ENSCAFG00020013089	ZNF234	84	58.621
ENSCAFG00020024945	-	79	58.571	ENSCAFG00020019077	-	97	58.571
ENSCAFG00020024945	-	66	56.738	ENSCAFG00020014929	-	97	56.738
ENSCAFG00020024945	-	69	55.319	ENSCAFG00020019570	ZNF599	70	55.319
ENSCAFG00020024945	-	61	49.107	ENSCAFG00020014558	ZNF574	51	49.123
ENSCAFG00020024945	-	61	57.391	ENSCAFG00020014950	-	97	57.391

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020024945	-	84	64.202	ENSCJAG00000019885	ZNF500	53	64.479	Callithrix_jacchus
ENSCAFG00020024945	-	100	100.000	ENSCAFG00000023007	-	100	100.000	Canis_familiaris
ENSCAFG00020024945	-	55	58.559	ENSGAGG00000006848	-	55	58.559	Gopherus_agassizii