EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020025109 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 2886 bases
Position: chrQKWQ01001938.1:44461778-44464663
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020032246	RRM_1	PF00076.22	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020037218	-	249	-	ENSCAFP00020032246	82 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020025109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020025109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020025109	-	77	41.270	ENSCAFG00020017577	-	55	41.270
ENSCAFG00020025109	-	79	90.769	ENSCAFG00020024552	RBMXL1	79	90.769
ENSCAFG00020025109	-	79	72.727	ENSCAFG00020008202	-	51	72.727
ENSCAFG00020025109	-	76	53.226	ENSCAFG00020021344	-	69	53.226
ENSCAFG00020025109	-	74	54.098	ENSCAFG00020017705	-	51	54.098
ENSCAFG00020025109	-	71	56.897	ENSCAFG00020020106	-	55	56.897

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020025109	-	95	79.487	ENSG00000147274	RBMX	97	86.111	Homo_sapiens
ENSCAFG00020025109	-	77	85.714	ENSAMEG00000010565	-	88	85.714	Ailuropoda_melanoleuca
ENSCAFG00020025109	-	89	83.784	ENSANAG00000037179	-	89	83.784	Aotus_nancymaae
ENSCAFG00020025109	-	95	79.487	ENSANAG00000028304	RBMX	100	79.487	Aotus_nancymaae
ENSCAFG00020025109	-	95	81.013	ENSANAG00000028483	-	82	81.013	Aotus_nancymaae
ENSCAFG00020025109	-	95	78.205	ENSCJAG00000041629	-	88	78.205	Callithrix_jacchus
ENSCAFG00020025109	-	95	79.487	ENSCJAG00000040528	-	100	79.487	Callithrix_jacchus
ENSCAFG00020025109	-	89	83.784	ENSCPOG00000012164	RBMX	72	83.784	Cavia_porcellus
ENSCAFG00020025109	-	79	90.769	ENSCCAG00000036263	-	77	90.769	Cebus_capucinus
ENSCAFG00020025109	-	89	83.784	ENSCCAG00000028588	-	90	83.784	Cebus_capucinus
ENSCAFG00020025109	-	89	82.432	ENSCCAG00000037368	-	76	82.432	Cebus_capucinus
ENSCAFG00020025109	-	89	68.919	ENSCATG00000032253	-	89	68.919	Cercocebus_atys
ENSCAFG00020025109	-	95	79.487	ENSCATG00000034355	-	100	79.487	Cercocebus_atys
ENSCAFG00020025109	-	95	79.487	ENSCANG00000031609	-	100	79.487	Colobus_angolensis_palliatus
ENSCAFG00020025109	-	89	83.784	ENSCANG00000038825	-	76	83.784	Colobus_angolensis_palliatus
ENSCAFG00020025109	-	89	83.784	ENSCGRG00000001522	Rbmx	72	83.784	Cricetulus_griseus_crigri
ENSCAFG00020025109	-	89	83.784	ENSDORG00000015481	-	72	83.784	Dipodomys_ordii
ENSCAFG00020025109	-	95	79.012	ENSGGOG00000037578	-	94	79.012	Gorilla_gorilla
ENSCAFG00020025109	-	89	83.784	ENSHGLG00000011055	RBMX	72	83.784	Heterocephalus_glaber_female
ENSCAFG00020025109	-	94	64.103	ENSHGLG00100000887	-	84	64.103	Heterocephalus_glaber_male
ENSCAFG00020025109	-	89	83.784	ENSHGLG00100001361	-	72	83.784	Heterocephalus_glaber_male
ENSCAFG00020025109	-	95	79.487	ENSMFAG00000032479	RBMX	100	79.487	Macaca_fascicularis
ENSCAFG00020025109	-	89	83.784	ENSMMUG00000040370	-	50	83.784	Macaca_mulatta
ENSCAFG00020025109	-	95	79.487	ENSMNEG00000033588	-	100	79.487	Macaca_nemestrina
ENSCAFG00020025109	-	89	68.919	ENSMNEG00000027176	-	89	68.919	Macaca_nemestrina
ENSCAFG00020025109	-	95	79.487	ENSMLEG00000021095	-	100	79.487	Mandrillus_leucophaeus
ENSCAFG00020025109	-	89	81.081	ENSMLEG00000009623	-	88	81.081	Mandrillus_leucophaeus
ENSCAFG00020025109	-	95	79.012	ENSMICG00000030109	-	69	79.012	Microcebus_murinus
ENSCAFG00020025109	-	96	70.886	ENSMICG00000031444	-	99	70.886	Microcebus_murinus
ENSCAFG00020025109	-	95	78.481	ENSMOCG00000004335	-	100	78.481	Microtus_ochrogaster
ENSCAFG00020025109	-	89	83.784	MGP_CAROLIEiJ_G0033098	Rbmx	72	83.784	Mus_caroli
ENSCAFG00020025109	-	89	83.784	ENSMUSG00000031134	Rbmx	72	83.784	Mus_musculus
ENSCAFG00020025109	-	89	83.784	MGP_PahariEiJ_G0031641	Rbmx	72	83.784	Mus_pahari
ENSCAFG00020025109	-	89	83.784	MGP_SPRETEiJ_G0034253	Rbmx	72	83.784	Mus_spretus
ENSCAFG00020025109	-	79	90.769	ENSODEG00000005580	-	72	90.769	Octodon_degus
ENSCAFG00020025109	-	79	84.615	ENSPPAG00000031010	-	77	84.615	Pan_paniscus
ENSCAFG00020025109	-	95	79.487	ENSPPAG00000028409	-	100	79.487	Pan_paniscus
ENSCAFG00020025109	-	95	78.481	ENSPPAG00000026662	-	52	78.481	Pan_paniscus
ENSCAFG00020025109	-	95	79.487	ENSPTRG00000052587	RBMX	100	79.487	Pan_troglodytes
ENSCAFG00020025109	-	89	83.784	ENSPANG00000030653	-	89	83.784	Papio_anubis
ENSCAFG00020025109	-	95	79.487	ENSPANG00000018448	-	100	79.487	Papio_anubis
ENSCAFG00020025109	-	79	75.385	ENSPCIG00000018117	-	66	75.385	Phascolarctos_cinereus
ENSCAFG00020025109	-	89	79.730	ENSPPYG00000019152	-	57	79.730	Pongo_abelii
ENSCAFG00020025109	-	79	90.769	ENSPCOG00000013607	-	83	90.769	Propithecus_coquereli
ENSCAFG00020025109	-	95	79.487	ENSRBIG00000042033	-	100	79.487	Rhinopithecus_bieti
ENSCAFG00020025109	-	89	68.919	ENSRBIG00000030841	-	89	68.919	Rhinopithecus_bieti
ENSCAFG00020025109	-	79	86.154	ENSRROG00000034426	-	67	86.154	Rhinopithecus_roxellana
ENSCAFG00020025109	-	95	79.487	ENSRROG00000041167	-	100	79.487	Rhinopithecus_roxellana
ENSCAFG00020025109	-	89	81.081	ENSSBOG00000026502	-	76	81.081	Saimiri_boliviensis_boliviensis
ENSCAFG00020025109	-	79	70.769	ENSSBOG00000021152	-	81	70.769	Saimiri_boliviensis_boliviensis
ENSCAFG00020025109	-	79	84.615	ENSUAMG00000002157	-	81	84.615	Ursus_americanus