EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020025620 (Gene tree)
Gene ID: 112655009
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 383426 bases
Position: chrQKWQ01000972.1:13966915-14350340
Accession: 18585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020032986	RRM_1	PF00076.22	3.1e-31	1	2
ENSCAFP00020032986	RRM_1	PF00076.22	3.1e-31	2	2
ENSCAFP00020032985	RRM_1	PF00076.22	5.9e-31	1	2
ENSCAFP00020032985	RRM_1	PF00076.22	5.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020038066	MSI2-202	2648	-	ENSCAFP00020032986	302 (aa)	-	-
ENSCAFT00020038064	MSI2-201	1490	-	ENSCAFP00020032985	393 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020025620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020025620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020025620	MSI2	69	31.915	ENSCAFG00020002258	-	66	32.824
ENSCAFG00020025620	MSI2	56	40.230	ENSCAFG00020003488	HNRNPA2B1	82	40.230
ENSCAFG00020025620	MSI2	56	39.521	ENSCAFG00020010583	-	65	36.715
ENSCAFG00020025620	MSI2	51	38.806	ENSCAFG00020012622	-	60	32.432
ENSCAFG00020025620	MSI2	52	40.000	ENSCAFG00020017138	CIRBP	68	42.308
ENSCAFG00020025620	MSI2	56	42.169	ENSCAFG00020006299	-	89	38.222
ENSCAFG00020025620	MSI2	56	38.554	ENSCAFG00020003361	-	84	34.010
ENSCAFG00020025620	MSI2	55	40.000	ENSCAFG00020017705	-	96	44.444
ENSCAFG00020025620	MSI2	58	40.854	ENSCAFG00020008142	HNRNPA0	79	35.217
ENSCAFG00020025620	MSI2	56	42.169	ENSCAFG00020004585	-	69	38.462
ENSCAFG00020025620	MSI2	54	48.466	ENSCAFG00020003646	HNRNPAB	68	44.000
ENSCAFG00020025620	MSI2	56	39.759	ENSCAFG00020018495	-	78	35.981
ENSCAFG00020025620	MSI2	54	31.325	ENSCAFG00020021537	-	52	30.120
ENSCAFG00020025620	MSI2	55	46.296	ENSCAFG00020010713	HNRNPD	85	39.450
ENSCAFG00020025620	MSI2	55	47.853	ENSCAFG00020010699	-	57	43.523
ENSCAFG00020025620	MSI2	72	82.564	ENSCAFG00020020585	MSI1	100	69.132

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020025620	MSI2	81	98.746	ENSG00000153944	MSI2	100	99.338	Homo_sapiens
ENSCAFG00020025620	MSI2	81	87.188	ENSAPOG00000001658	msi2a	94	87.580	Acanthochromis_polyacanthus
ENSCAFG00020025620	MSI2	81	98.746	ENSAMEG00000002697	MSI2	99	98.746	Ailuropoda_melanoleuca
ENSCAFG00020025620	MSI2	72	89.862	ENSACIG00000009475	msi2a	94	77.465	Amphilophus_citrinellus
ENSCAFG00020025620	MSI2	51	85.965	ENSAOCG00000014822	msi2a	64	85.841	Amphiprion_ocellaris
ENSCAFG00020025620	MSI2	81	87.188	ENSAPEG00000007706	msi2a	94	87.580	Amphiprion_percula
ENSCAFG00020025620	MSI2	81	87.500	ENSATEG00000003301	-	100	87.500	Anabas_testudineus
ENSCAFG00020025620	MSI2	81	87.188	ENSATEG00000010498	msi2a	94	87.580	Anabas_testudineus
ENSCAFG00020025620	MSI2	73	97.849	ENSACAG00000005452	MSI2	68	97.826	Anolis_carolinensis
ENSCAFG00020025620	MSI2	81	93.103	ENSANAG00000037827	MSI2	96	98.246	Aotus_nancymaae
ENSCAFG00020025620	MSI2	81	86.875	ENSACLG00000007752	msi2a	94	87.261	Astatotilapia_calliptera
ENSCAFG00020025620	MSI2	81	90.323	ENSAMXG00000010474	msi2b	95	90.291	Astyanax_mexicanus
ENSCAFG00020025620	MSI2	81	88.438	ENSAMXG00000032796	msi2a	94	85.761	Astyanax_mexicanus
ENSCAFG00020025620	MSI2	81	92.790	ENSBTAG00000004406	MSI2	97	92.790	Bos_taurus
ENSCAFG00020025620	MSI2	70	60.177	WBGene00003423	msi-1	73	61.574	Caenorhabditis_elegans
ENSCAFG00020025620	MSI2	81	93.103	ENSCJAG00000013998	MSI2	96	98.246	Callithrix_jacchus
ENSCAFG00020025620	MSI2	81	92.790	ENSCHIG00000016580	MSI2	94	92.790	Capra_hircus
ENSCAFG00020025620	MSI2	81	89.667	ENSCPOG00000034042	MSI2	99	89.667	Cavia_porcellus
ENSCAFG00020025620	MSI2	81	93.103	ENSCCAG00000033927	MSI2	96	98.246	Cebus_capucinus
ENSCAFG00020025620	MSI2	81	93.103	ENSCATG00000040879	MSI2	96	98.246	Cercocebus_atys
ENSCAFG00020025620	MSI2	81	98.746	ENSCLAG00000014325	MSI2	94	98.746	Chinchilla_lanigera
ENSCAFG00020025620	MSI2	81	93.103	ENSCSAG00000005633	MSI2	94	93.103	Chlorocebus_sabaeus
ENSCAFG00020025620	MSI2	59	100.000	ENSCHOG00000008660	MSI2	83	100.000	Choloepus_hoffmanni
ENSCAFG00020025620	MSI2	78	98.795	ENSCPBG00000009942	MSI2	96	93.688	Chrysemys_picta_bellii
ENSCAFG00020025620	MSI2	67	72.222	ENSCING00000018579	-	97	49.791	Ciona_intestinalis
ENSCAFG00020025620	MSI2	68	64.352	ENSCSAVG00000010397	-	76	62.222	Ciona_savignyi
ENSCAFG00020025620	MSI2	81	98.746	ENSCANG00000036414	MSI2	100	98.746	Colobus_angolensis_palliatus
ENSCAFG00020025620	MSI2	81	92.812	ENSCGRG00001013330	Msi2	94	92.812	Cricetulus_griseus_chok1gshd
ENSCAFG00020025620	MSI2	81	98.438	ENSCGRG00000003141	Msi2	100	98.438	Cricetulus_griseus_crigri
ENSCAFG00020025620	MSI2	69	69.340	ENSCSEG00000013557	msi2a	83	67.925	Cynoglossus_semilaevis
ENSCAFG00020025620	MSI2	53	69.427	ENSCSEG00000013549	msi2a	88	70.068	Cynoglossus_semilaevis
ENSCAFG00020025620	MSI2	80	79.299	ENSCSEG00000003266	-	90	78.964	Cynoglossus_semilaevis
ENSCAFG00020025620	MSI2	81	86.875	ENSCVAG00000017075	msi2a	94	87.261	Cyprinodon_variegatus
ENSCAFG00020025620	MSI2	72	91.244	ENSDARG00000033901	msi2a	95	78.632	Danio_rerio
ENSCAFG00020025620	MSI2	71	96.875	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSCAFG00020025620	MSI2	81	94.118	ENSDNOG00000014501	MSI2	100	94.118	Dasypus_novemcinctus
ENSCAFG00020025620	MSI2	54	96.296	ENSDORG00000028440	-	100	100.000	Dipodomys_ordii
ENSCAFG00020025620	MSI2	69	81.395	ENSDORG00000005394	Msi2	84	81.395	Dipodomys_ordii
ENSCAFG00020025620	MSI2	71	68.778	FBgn0260943	Rbp6	88	68.750	Drosophila_melanogaster
ENSCAFG00020025620	MSI2	71	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSCAFG00020025620	MSI2	71	80.093	ENSEBUG00000006732	msi2a	86	68.506	Eptatretus_burgeri
ENSCAFG00020025620	MSI2	100	90.164	ENSEASG00005002965	MSI2	97	88.623	Equus_asinus_asinus
ENSCAFG00020025620	MSI2	81	96.024	ENSECAG00000011435	MSI2	94	96.024	Equus_caballus
ENSCAFG00020025620	MSI2	73	78.967	ENSEEUG00000007810	MSI2	100	78.967	Erinaceus_europaeus
ENSCAFG00020025620	MSI2	81	89.032	ENSELUG00000011747	msi2a	93	88.997	Esox_lucius
ENSCAFG00020025620	MSI2	81	92.332	ENSELUG00000001361	msi2b	93	92.308	Esox_lucius
ENSCAFG00020025620	MSI2	81	93.103	ENSFCAG00000041686	MSI2	96	98.246	Felis_catus
ENSCAFG00020025620	MSI2	52	82.258	ENSFCAG00000033787	-	69	82.353	Felis_catus
ENSCAFG00020025620	MSI2	81	98.746	ENSFDAG00000016118	MSI2	100	98.746	Fukomys_damarensis
ENSCAFG00020025620	MSI2	81	86.875	ENSFHEG00000000084	msi2a	94	87.261	Fundulus_heteroclitus
ENSCAFG00020025620	MSI2	51	90.909	ENSGMOG00000007596	-	80	95.522	Gadus_morhua
ENSCAFG00020025620	MSI2	81	97.179	ENSGALG00000005567	MSI2	94	97.179	Gallus_gallus
ENSCAFG00020025620	MSI2	78	77.742	ENSGAFG00000006974	msi2a	78	95.614	Gambusia_affinis
ENSCAFG00020025620	MSI2	81	96.053	ENSGAGG00000016542	MSI2	100	96.053	Gopherus_agassizii
ENSCAFG00020025620	MSI2	81	98.746	ENSGGOG00000013182	MSI2	100	98.746	Gorilla_gorilla
ENSCAFG00020025620	MSI2	81	86.875	ENSHBUG00000020800	msi2a	94	87.261	Haplochromis_burtoni
ENSCAFG00020025620	MSI2	81	89.028	ENSHGLG00000012444	MSI2	91	89.028	Heterocephalus_glaber_female
ENSCAFG00020025620	MSI2	54	96.330	ENSHGLG00100004028	-	88	99.000	Heterocephalus_glaber_male
ENSCAFG00020025620	MSI2	67	100.000	ENSHGLG00100003744	MSI2	100	100.000	Heterocephalus_glaber_male
ENSCAFG00020025620	MSI2	72	85.116	ENSHCOG00000017241	-	70	87.440	Hippocampus_comes
ENSCAFG00020025620	MSI2	79	84.244	ENSHCOG00000000266	msi2a	91	84.590	Hippocampus_comes
ENSCAFG00020025620	MSI2	81	86.452	ENSIPUG00000003732	msi2b	93	86.408	Ictalurus_punctatus
ENSCAFG00020025620	MSI2	81	87.742	ENSIPUG00000021097	msi2a	93	86.408	Ictalurus_punctatus
ENSCAFG00020025620	MSI2	81	89.667	ENSSTOG00000007884	MSI2	99	89.667	Ictidomys_tridecemlineatus
ENSCAFG00020025620	MSI2	54	96.296	ENSJJAG00000009467	-	100	100.000	Jaculus_jaculus
ENSCAFG00020025620	MSI2	67	88.889	ENSJJAG00000006292	-	100	88.406	Jaculus_jaculus
ENSCAFG00020025620	MSI2	78	85.294	ENSKMAG00000009494	msi2a	89	86.441	Kryptolebias_marmoratus
ENSCAFG00020025620	MSI2	81	85.893	ENSLBEG00000007061	msi2a	93	87.702	Labrus_bergylta
ENSCAFG00020025620	MSI2	73	83.333	ENSLBEG00000026223	-	100	68.915	Labrus_bergylta
ENSCAFG00020025620	MSI2	51	97.143	ENSLACG00000016798	MSI2	89	97.143	Latimeria_chalumnae
ENSCAFG00020025620	MSI2	72	94.470	ENSLOCG00000004675	msi2b	95	81.714	Lepisosteus_oculatus
ENSCAFG00020025620	MSI2	81	98.746	ENSMFAG00000003775	MSI2	100	98.746	Macaca_fascicularis
ENSCAFG00020025620	MSI2	81	98.746	ENSMMUG00000002069	MSI2	100	98.746	Macaca_mulatta
ENSCAFG00020025620	MSI2	81	93.103	ENSMNEG00000045275	MSI2	96	98.246	Macaca_nemestrina
ENSCAFG00020025620	MSI2	81	98.746	ENSMLEG00000033888	MSI2	100	98.746	Mandrillus_leucophaeus
ENSCAFG00020025620	MSI2	81	85.312	ENSMAMG00000010503	msi2a	94	85.397	Mastacembelus_armatus
ENSCAFG00020025620	MSI2	81	85.161	ENSMAMG00000002488	-	85	95.614	Mastacembelus_armatus
ENSCAFG00020025620	MSI2	81	86.520	ENSMZEG00005007676	msi2a	94	87.379	Maylandia_zebra
ENSCAFG00020025620	MSI2	81	98.438	ENSMAUG00000003862	Msi2	94	98.438	Mesocricetus_auratus
ENSCAFG00020025620	MSI2	81	74.375	ENSMICG00000032913	-	93	73.226	Microcebus_murinus
ENSCAFG00020025620	MSI2	81	93.103	ENSMICG00000013598	-	96	98.246	Microcebus_murinus
ENSCAFG00020025620	MSI2	81	98.746	ENSMOCG00000005820	Msi2	94	98.746	Microtus_ochrogaster
ENSCAFG00020025620	MSI2	71	91.628	ENSMMOG00000008348	msi2a	91	82.372	Mola_mola
ENSCAFG00020025620	MSI2	67	98.551	ENSMODG00000014790	MSI2	100	98.551	Monodelphis_domestica
ENSCAFG00020025620	MSI2	81	87.188	ENSMALG00000000071	msi2a	93	94.828	Monopterus_albus
ENSCAFG00020025620	MSI2	81	98.746	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSCAFG00020025620	MSI2	81	98.746	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSCAFG00020025620	MSI2	81	98.746	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSCAFG00020025620	MSI2	81	98.746	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSCAFG00020025620	MSI2	81	93.103	ENSMPUG00000015377	MSI2	97	93.103	Mustela_putorius_furo
ENSCAFG00020025620	MSI2	81	93.103	ENSMLUG00000007865	MSI2	97	93.103	Myotis_lucifugus
ENSCAFG00020025620	MSI2	81	98.746	ENSNGAG00000017807	Msi2	94	98.746	Nannospalax_galili
ENSCAFG00020025620	MSI2	81	85.580	ENSNBRG00000014596	msi2a	93	87.379	Neolamprologus_brichardi
ENSCAFG00020025620	MSI2	81	100.000	ENSNLEG00000008059	MSI2	100	100.000	Nomascus_leucogenys
ENSCAFG00020025620	MSI2	71	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSCAFG00020025620	MSI2	81	98.746	ENSODEG00000011974	MSI2	94	98.746	Octodon_degus
ENSCAFG00020025620	MSI2	54	92.742	ENSONIG00000001972	msi2a	72	95.614	Oreochromis_niloticus
ENSCAFG00020025620	MSI2	79	92.672	ENSOANG00000005667	MSI2	70	99.034	Ornithorhynchus_anatinus
ENSCAFG00020025620	MSI2	81	93.103	ENSOCUG00000010440	MSI2	97	93.103	Oryctolagus_cuniculus
ENSCAFG00020025620	MSI2	81	87.742	ENSORLG00000009671	msi2a	94	87.702	Oryzias_latipes
ENSCAFG00020025620	MSI2	81	87.742	ENSORLG00020021556	msi2a	95	87.580	Oryzias_latipes_hni
ENSCAFG00020025620	MSI2	81	87.742	ENSORLG00015004592	msi2a	94	87.702	Oryzias_latipes_hsok
ENSCAFG00020025620	MSI2	81	87.147	ENSOMEG00000000146	msi2a	95	87.702	Oryzias_melastigma
ENSCAFG00020025620	MSI2	81	88.715	ENSOGAG00000005621	MSI2	99	88.715	Otolemur_garnettii
ENSCAFG00020025620	MSI2	81	98.746	ENSPPAG00000037697	MSI2	100	98.746	Pan_paniscus
ENSCAFG00020025620	MSI2	81	93.103	ENSPPRG00000001848	MSI2	96	98.246	Panthera_pardus
ENSCAFG00020025620	MSI2	75	82.456	ENSPTIG00000021873	-	86	82.511	Panthera_tigris_altaica
ENSCAFG00020025620	MSI2	81	100.000	ENSPTIG00000021678	MSI2	96	100.000	Panthera_tigris_altaica
ENSCAFG00020025620	MSI2	81	98.746	ENSPTRG00000009437	MSI2	100	98.746	Pan_troglodytes
ENSCAFG00020025620	MSI2	81	93.103	ENSPANG00000022319	MSI2	96	98.246	Papio_anubis
ENSCAFG00020025620	MSI2	73	89.954	ENSPKIG00000007038	-	94	79.701	Paramormyrops_kingsleyae
ENSCAFG00020025620	MSI2	72	96.313	ENSPSIG00000008618	MSI2	81	98.795	Pelodiscus_sinensis
ENSCAFG00020025620	MSI2	81	85.266	ENSPMGG00000005888	msi2a	93	87.055	Periophthalmus_magnuspinnatus
ENSCAFG00020025620	MSI2	54	96.296	ENSPEMG00000021793	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSCAFG00020025620	MSI2	90	94.350	ENSPCIG00000006063	MSI2	99	94.350	Phascolarctos_cinereus
ENSCAFG00020025620	MSI2	53	88.462	ENSPFOG00000019337	MSI2	74	92.647	Poecilia_formosa
ENSCAFG00020025620	MSI2	54	92.661	ENSPLAG00000000436	msi2a	61	95.960	Poecilia_latipinna
ENSCAFG00020025620	MSI2	51	96.000	ENSPMEG00000013247	msi2a	62	95.960	Poecilia_mexicana
ENSCAFG00020025620	MSI2	81	83.386	ENSPREG00000000881	msi2a	92	85.113	Poecilia_reticulata
ENSCAFG00020025620	MSI2	81	89.844	ENSPPYG00000008244	-	100	89.844	Pongo_abelii
ENSCAFG00020025620	MSI2	65	65.625	ENSPCAG00000010552	MSI2	100	65.625	Procavia_capensis
ENSCAFG00020025620	MSI2	54	96.774	ENSPCOG00000019195	-	93	100.000	Propithecus_coquereli
ENSCAFG00020025620	MSI2	81	85.531	ENSPVAG00000017053	MSI2	100	85.531	Pteropus_vampyrus
ENSCAFG00020025620	MSI2	81	86.520	ENSPNYG00000018393	msi2a	94	87.379	Pundamilia_nyererei
ENSCAFG00020025620	MSI2	81	89.711	ENSPNAG00000000844	msi2b	93	87.055	Pygocentrus_nattereri
ENSCAFG00020025620	MSI2	81	89.389	ENSPNAG00000014957	msi2a	94	86.731	Pygocentrus_nattereri
ENSCAFG00020025620	MSI2	81	93.919	ENSRNOG00000025338	Msi2	100	93.919	Rattus_norvegicus
ENSCAFG00020025620	MSI2	54	96.296	ENSRROG00000034421	-	92	100.000	Rhinopithecus_roxellana
ENSCAFG00020025620	MSI2	81	98.746	ENSSBOG00000026425	MSI2	100	98.746	Saimiri_boliviensis_boliviensis
ENSCAFG00020025620	MSI2	81	97.492	ENSSHAG00000008672	MSI2	100	97.492	Sarcophilus_harrisii
ENSCAFG00020025620	MSI2	81	83.072	ENSSFOG00015021687	-	97	81.553	Scleropages_formosus
ENSCAFG00020025620	MSI2	71	85.714	ENSSFOG00015012168	msi2b	73	87.019	Scleropages_formosus
ENSCAFG00020025620	MSI2	81	87.188	ENSSMAG00000018484	msi2a	94	87.580	Scophthalmus_maximus
ENSCAFG00020025620	MSI2	81	86.120	ENSSDUG00000021968	-	86	94.737	Seriola_dumerili
ENSCAFG00020025620	MSI2	81	87.188	ENSSDUG00000014507	msi2a	94	87.580	Seriola_dumerili
ENSCAFG00020025620	MSI2	81	85.893	ENSSLDG00000017172	msi2a	93	87.702	Seriola_lalandi_dorsalis
ENSCAFG00020025620	MSI2	54	92.366	ENSSPUG00000000913	-	81	95.041	Sphenodon_punctatus
ENSCAFG00020025620	MSI2	73	91.781	ENSSPAG00000017793	msi2a	89	80.405	Stegastes_partitus
ENSCAFG00020025620	MSI2	81	98.746	ENSSSCG00000038505	MSI2	97	98.746	Sus_scrofa
ENSCAFG00020025620	MSI2	67	99.034	ENSTGUG00000008452	MSI2	100	99.034	Taeniopygia_guttata
ENSCAFG00020025620	MSI2	81	86.984	ENSTRUG00000021248	msi2a	87	87.055	Takifugu_rubripes
ENSCAFG00020025620	MSI2	70	83.333	ENSTBEG00000001241	MSI2	62	84.653	Tupaia_belangeri
ENSCAFG00020025620	MSI2	71	100.000	ENSTTRG00000002189	MSI2	100	84.375	Tursiops_truncatus
ENSCAFG00020025620	MSI2	81	93.103	ENSUAMG00000000700	MSI2	96	98.246	Ursus_americanus
ENSCAFG00020025620	MSI2	73	98.469	ENSUMAG00000000505	MSI2	95	86.219	Ursus_maritimus
ENSCAFG00020025620	MSI2	60	84.615	ENSVPAG00000006837	-	61	84.444	Vicugna_pacos
ENSCAFG00020025620	MSI2	100	98.013	ENSVVUG00000011783	MSI2	94	98.746	Vulpes_vulpes
ENSCAFG00020025620	MSI2	71	93.370	ENSXCOG00000006113	msi2a	96	76.857	Xiphophorus_couchianus
ENSCAFG00020025620	MSI2	81	86.875	ENSXMAG00000000608	msi2a	94	87.261	Xiphophorus_maculatus