EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020025973 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 10177 bases
Position: chrQKWQ01001938.1:46959160-46969336
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020033452	ResIII	PF04851.15	4.3e-08	1	1
ENSCAFP00020033452	DEAD	PF00270.29	1.9e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020038586	-	1095	-	ENSCAFP00020033452	364 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020025973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020025973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020025973	-	95	35.143	ENSCAFG00020010029	-	52	35.143
ENSCAFG00020025973	-	91	35.398	ENSCAFG00020026563	DDX5	53	35.398
ENSCAFG00020025973	-	91	35.294	ENSCAFG00020002867	DDX17	74	35.604
ENSCAFG00020025973	-	80	32.343	ENSCAFG00020010651	DDX25	67	31.195
ENSCAFG00020025973	-	80	31.353	ENSCAFG00020020954	DDX19A	59	31.353
ENSCAFG00020025973	-	91	30.904	ENSCAFG00020012019	DDX41	53	30.904
ENSCAFG00020025973	-	90	32.036	ENSCAFG00020007858	EIF4A1	84	31.707
ENSCAFG00020025973	-	95	35.143	ENSCAFG00020002717	-	56	35.143
ENSCAFG00020025973	-	56	34.135	ENSCAFG00020008055	DDX20	59	34.135
ENSCAFG00020025973	-	80	31.023	ENSCAFG00020020959	-	54	31.023
ENSCAFG00020025973	-	94	32.692	ENSCAFG00020006612	DDX47	73	32.394
ENSCAFG00020025973	-	93	33.243	ENSCAFG00020027227	DDX3X	54	33.243
ENSCAFG00020025973	-	92	31.765	ENSCAFG00020008253	EIF4A3	78	31.858
ENSCAFG00020025973	-	87	32.188	ENSCAFG00020005312	-	66	32.188
ENSCAFG00020025973	-	90	31.532	ENSCAFG00020006146	EIF4A2	88	31.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020025973	-	93	76.696	ENSAPOG00000012269	ddx21	62	76.696	Acanthochromis_polyacanthus
ENSCAFG00020025973	-	94	94.152	ENSANAG00000038109	DDX21	99	91.765	Aotus_nancymaae
ENSCAFG00020025973	-	93	94.985	ENSCCAG00000026288	DDX21	100	88.547	Cebus_capucinus
ENSCAFG00020025973	-	93	82.891	ENSCPBG00000019934	-	50	82.891	Chrysemys_picta_bellii
ENSCAFG00020025973	-	93	83.481	ENSFALG00000013022	-	50	83.481	Ficedula_albicollis
ENSCAFG00020025973	-	87	72.871	ENSGMOG00000012354	ddx21	52	72.871	Gadus_morhua
ENSCAFG00020025973	-	93	83.481	ENSGALG00000004144	-	50	83.481	Gallus_gallus
ENSCAFG00020025973	-	93	76.106	ENSGALG00000042254	-	50	76.106	Gallus_gallus
ENSCAFG00020025973	-	94	77.193	ENSGACG00000016060	ddx21	51	77.193	Gasterosteus_aculeatus
ENSCAFG00020025973	-	92	82.090	ENSGAGG00000022169	-	52	82.090	Gopherus_agassizii
ENSCAFG00020025973	-	93	81.121	ENSLACG00000000658	DDX21	58	81.121	Latimeria_chalumnae
ENSCAFG00020025973	-	93	94.395	ENSMFAG00000044838	DDX21	99	90.536	Macaca_fascicularis
ENSCAFG00020025973	-	87	93.651	ENSMLEG00000028940	DDX21	96	89.614	Mandrillus_leucophaeus
ENSCAFG00020025973	-	93	82.891	ENSMGAG00000004298	DDX21	50	82.891	Meleagris_gallopavo
ENSCAFG00020025973	-	93	81.711	ENSMICG00000033371	-	87	80.243	Microcebus_murinus
ENSCAFG00020025973	-	87	74.684	ENSMMOG00000015938	ddx21	59	74.684	Mola_mola
ENSCAFG00020025973	-	94	76.540	ENSORLG00000010122	ddx21	52	76.540	Oryzias_latipes
ENSCAFG00020025973	-	94	76.246	ENSORLG00020004409	ddx21	52	76.246	Oryzias_latipes_hni
ENSCAFG00020025973	-	94	76.540	ENSORLG00015000051	ddx21	52	76.540	Oryzias_latipes_hsok
ENSCAFG00020025973	-	93	86.136	ENSOGAG00000031242	-	54	86.136	Otolemur_garnettii
ENSCAFG00020025973	-	93	81.416	ENSPSIG00000004724	DDX21	50	81.416	Pelodiscus_sinensis
ENSCAFG00020025973	-	93	77.286	ENSPMGG00000000721	ddx21	96	77.286	Periophthalmus_magnuspinnatus
ENSCAFG00020025973	-	86	76.433	ENSPNYG00000015566	ddx21	50	76.433	Pundamilia_nyererei
ENSCAFG00020025973	-	93	94.100	ENSRBIG00000043721	-	66	92.330	Rhinopithecus_bieti
ENSCAFG00020025973	-	92	77.778	ENSSBOG00000024156	-	93	77.778	Saimiri_boliviensis_boliviensis
ENSCAFG00020025973	-	94	78.592	ENSSFOG00015014610	ddx21	53	78.592	Scleropages_formosus
ENSCAFG00020025973	-	94	75.510	ENSSLDG00000025665	ddx21	54	75.510	Seriola_lalandi_dorsalis
ENSCAFG00020025973	-	93	82.596	ENSSPUG00000004088	DDX21	50	79.351	Sphenodon_punctatus
ENSCAFG00020025973	-	92	83.881	ENSTGUG00000003810	-	50	83.186	Taeniopygia_guttata
ENSCAFG00020025973	-	58	83.019	ENSTGUG00000015490	-	100	83.019	Taeniopygia_guttata
ENSCAFG00020025973	-	93	76.991	ENSTNIG00000013798	ddx21	56	76.991	Tetraodon_nigroviridis
ENSCAFG00020025973	-	94	93.567	ENSVPAG00000000627	DDX21	50	93.567	Vicugna_pacos