EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020025977 (Gene tree)
Gene ID: 112651342
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 29277 bases
Position: chrQKWQ01001938.1:46978957-47008233
Accession: 112651342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020033457	GUCT	PF08152.12	8.1e-28	1	1
ENSCAFP00020033457	ResIII	PF04851.15	4.2e-10	1	1
ENSCAFP00020033457	DEAD	PF00270.29	2.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020038592	DDX50-201	2547	XM_025434492	ENSCAFP00020033457	739 (aa)	XP_025290277	UPI00022578A9

Gene Model

Click here to download ENSCAFG00020025977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020025977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020025977	DDX50	63	32.025	ENSCAFG00020014114	DDX18	57	34.177
ENSCAFG00020025977	DDX50	55	33.099	ENSCAFG00020017143	DDX27	53	33.099
ENSCAFG00020025977	DDX50	50	32.800	ENSCAFG00020008253	EIF4A3	86	32.888
ENSCAFG00020025977	DDX50	50	31.536	ENSCAFG00020006146	EIF4A2	90	30.904
ENSCAFG00020025977	DDX50	50	32.533	ENSCAFG00020007858	EIF4A1	95	32.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020025977	DDX50	99	97.832	ENSG00000107625	DDX50	100	97.832	Homo_sapiens
ENSCAFG00020025977	DDX50	99	98.916	ENSAMEG00000017992	DDX50	100	98.916	Ailuropoda_melanoleuca
ENSCAFG00020025977	DDX50	92	77.601	ENSANAG00000017785	-	92	77.730	Aotus_nancymaae
ENSCAFG00020025977	DDX50	99	97.561	ENSBTAG00000033413	DDX50	100	97.561	Bos_taurus
ENSCAFG00020025977	DDX50	99	97.967	ENSCJAG00000018844	DDX50	100	97.967	Callithrix_jacchus
ENSCAFG00020025977	DDX50	99	100.000	ENSCAFG00000013776	DDX50	100	100.000	Canis_familiaris
ENSCAFG00020025977	DDX50	100	97.158	ENSCHIG00000000285	DDX50	100	97.158	Capra_hircus
ENSCAFG00020025977	DDX50	99	97.154	ENSTSYG00000004192	DDX50	100	97.154	Carlito_syrichta
ENSCAFG00020025977	DDX50	88	78.825	ENSCAPG00000007230	-	88	78.779	Cavia_aperea
ENSCAFG00020025977	DDX50	99	95.935	ENSCPOG00000002131	-	100	95.935	Cavia_porcellus
ENSCAFG00020025977	DDX50	83	87.476	ENSCCAG00000030543	DDX50	91	87.647	Cebus_capucinus
ENSCAFG00020025977	DDX50	99	66.127	ENSCATG00000039259	-	90	67.493	Cercocebus_atys
ENSCAFG00020025977	DDX50	99	95.522	ENSCATG00000032463	DDX50	99	95.522	Cercocebus_atys
ENSCAFG00020025977	DDX50	97	72.337	ENSCATG00000035153	-	90	89.474	Cercocebus_atys
ENSCAFG00020025977	DDX50	99	97.290	ENSCLAG00000012957	-	100	97.290	Chinchilla_lanigera
ENSCAFG00020025977	DDX50	50	87.263	ENSCLAG00000001553	-	80	88.535	Chinchilla_lanigera
ENSCAFG00020025977	DDX50	97	71.130	ENSCLAG00000001938	-	92	72.054	Chinchilla_lanigera
ENSCAFG00020025977	DDX50	99	97.967	ENSCSAG00000007703	DDX50	100	97.967	Chlorocebus_sabaeus
ENSCAFG00020025977	DDX50	90	95.202	ENSCHOG00000000233	DDX50	100	95.202	Choloepus_hoffmanni
ENSCAFG00020025977	DDX50	99	84.011	ENSCANG00000036450	-	100	84.011	Colobus_angolensis_palliatus
ENSCAFG00020025977	DDX50	96	68.855	ENSCANG00000028077	-	92	68.314	Colobus_angolensis_palliatus
ENSCAFG00020025977	DDX50	86	72.397	ENSCANG00000018820	-	89	73.230	Colobus_angolensis_palliatus
ENSCAFG00020025977	DDX50	92	95.140	ENSCGRG00001020223	Ddx50	93	95.022	Cricetulus_griseus_chok1gshd
ENSCAFG00020025977	DDX50	91	95.266	ENSCGRG00000015884	Ddx50	93	95.015	Cricetulus_griseus_crigri
ENSCAFG00020025977	DDX50	87	89.676	ENSDNOG00000001675	DDX50	100	89.676	Dasypus_novemcinctus
ENSCAFG00020025977	DDX50	92	96.171	ENSDORG00000007310	Ddx50	93	96.193	Dipodomys_ordii
ENSCAFG00020025977	DDX50	90	97.566	ENSETEG00000014069	DDX50	90	97.566	Echinops_telfairi
ENSCAFG00020025977	DDX50	100	97.835	ENSEASG00005015595	DDX50	100	97.835	Equus_asinus_asinus
ENSCAFG00020025977	DDX50	100	97.970	ENSECAG00000023044	DDX50	100	97.970	Equus_caballus
ENSCAFG00020025977	DDX50	89	96.552	ENSEEUG00000005782	DDX50	82	98.249	Erinaceus_europaeus
ENSCAFG00020025977	DDX50	100	99.323	ENSFCAG00000012678	DDX50	100	99.323	Felis_catus
ENSCAFG00020025977	DDX50	92	89.102	ENSFDAG00000016109	-	92	89.165	Fukomys_damarensis
ENSCAFG00020025977	DDX50	99	97.832	ENSGGOG00000010100	DDX50	99	99.198	Gorilla_gorilla
ENSCAFG00020025977	DDX50	52	71.094	ENSGGOG00000022568	-	92	78.723	Gorilla_gorilla
ENSCAFG00020025977	DDX50	51	82.275	ENSGGOG00000041063	-	83	85.139	Gorilla_gorilla
ENSCAFG00020025977	DDX50	92	94.993	ENSHGLG00000013466	DDX50	93	95.022	Heterocephalus_glaber_female
ENSCAFG00020025977	DDX50	92	94.993	ENSHGLG00100017191	DDX50	93	95.022	Heterocephalus_glaber_male
ENSCAFG00020025977	DDX50	82	88.298	ENSHGLG00100006568	-	93	88.542	Heterocephalus_glaber_male
ENSCAFG00020025977	DDX50	99	95.129	ENSSTOG00000021852	-	100	94.858	Ictidomys_tridecemlineatus
ENSCAFG00020025977	DDX50	99	73.046	ENSJJAG00000019626	-	91	73.574	Jaculus_jaculus
ENSCAFG00020025977	DDX50	99	94.444	ENSJJAG00000023928	-	93	94.436	Jaculus_jaculus
ENSCAFG00020025977	DDX50	99	96.883	ENSLAFG00000006186	DDX50	100	96.883	Loxodonta_africana
ENSCAFG00020025977	DDX50	99	97.967	ENSMFAG00000044067	DDX50	100	97.967	Macaca_fascicularis
ENSCAFG00020025977	DDX50	97	71.508	ENSMFAG00000045339	-	90	88.545	Macaca_fascicularis
ENSCAFG00020025977	DDX50	99	97.967	ENSMMUG00000001006	DDX50	100	98.960	Macaca_mulatta
ENSCAFG00020025977	DDX50	87	67.388	ENSMMUG00000045343	-	81	68.350	Macaca_mulatta
ENSCAFG00020025977	DDX50	92	91.016	ENSMNEG00000031664	DDX50	92	91.069	Macaca_nemestrina
ENSCAFG00020025977	DDX50	97	72.727	ENSMNEG00000045530	-	92	88.182	Macaca_nemestrina
ENSCAFG00020025977	DDX50	86	84.112	ENSMLEG00000041988	-	90	87.468	Mandrillus_leucophaeus
ENSCAFG00020025977	DDX50	99	96.070	ENSMLEG00000037313	DDX50	100	96.070	Mandrillus_leucophaeus
ENSCAFG00020025977	DDX50	56	92.995	ENSMAUG00000022192	Ddx50	100	92.995	Mesocricetus_auratus
ENSCAFG00020025977	DDX50	99	89.973	ENSMICG00000017539	DDX50	100	89.973	Microcebus_murinus
ENSCAFG00020025977	DDX50	92	94.860	ENSMOCG00000001676	Ddx50	93	94.307	Microtus_ochrogaster
ENSCAFG00020025977	DDX50	92	80.088	ENSMODG00000010741	DDX50	92	80.435	Monodelphis_domestica
ENSCAFG00020025977	DDX50	92	93.814	MGP_CAROLIEiJ_G0015389	Ddx50	93	94.583	Mus_caroli
ENSCAFG00020025977	DDX50	92	94.256	ENSMUSG00000020076	Ddx50	93	94.876	Mus_musculus
ENSCAFG00020025977	DDX50	92	94.404	MGP_PahariEiJ_G0030805	Ddx50	93	95.022	Mus_pahari
ENSCAFG00020025977	DDX50	92	94.256	MGP_SPRETEiJ_G0016200	Ddx50	93	94.876	Mus_spretus
ENSCAFG00020025977	DDX50	88	98.613	ENSMPUG00000004589	DDX50	100	98.613	Mustela_putorius_furo
ENSCAFG00020025977	DDX50	99	96.206	ENSMLUG00000017590	DDX50	100	96.206	Myotis_lucifugus
ENSCAFG00020025977	DDX50	99	96.070	ENSNGAG00000004283	Ddx50	100	96.070	Nannospalax_galili
ENSCAFG00020025977	DDX50	99	97.832	ENSNLEG00000011631	DDX50	100	97.832	Nomascus_leucogenys
ENSCAFG00020025977	DDX50	87	68.944	ENSNLEG00000035506	-	89	78.154	Nomascus_leucogenys
ENSCAFG00020025977	DDX50	92	93.962	ENSOPRG00000001619	DDX50	93	94.729	Ochotona_princeps
ENSCAFG00020025977	DDX50	99	96.070	ENSODEG00000014597	-	100	96.070	Octodon_degus
ENSCAFG00020025977	DDX50	93	67.382	ENSOANG00000004776	DDX50	76	71.906	Ornithorhynchus_anatinus
ENSCAFG00020025977	DDX50	94	94.126	ENSOCUG00000002879	DDX50	95	95.595	Oryctolagus_cuniculus
ENSCAFG00020025977	DDX50	99	97.425	ENSOGAG00000001844	DDX50	100	97.425	Otolemur_garnettii
ENSCAFG00020025977	DDX50	100	97.158	ENSOARG00000005264	DDX50	100	97.158	Ovis_aries
ENSCAFG00020025977	DDX50	51	71.053	ENSPPAG00000026788	-	91	78.769	Pan_paniscus
ENSCAFG00020025977	DDX50	99	97.696	ENSPPAG00000040723	DDX50	100	97.696	Pan_paniscus
ENSCAFG00020025977	DDX50	99	99.322	ENSPPRG00000015826	DDX50	100	99.322	Panthera_pardus
ENSCAFG00020025977	DDX50	99	99.322	ENSPTIG00000008454	DDX50	100	99.322	Panthera_tigris_altaica
ENSCAFG00020025977	DDX50	99	97.696	ENSPTRG00000002562	DDX50	100	97.696	Pan_troglodytes
ENSCAFG00020025977	DDX50	51	71.053	ENSPTRG00000044913	-	99	72.105	Pan_troglodytes
ENSCAFG00020025977	DDX50	92	90.280	ENSPANG00000022143	-	92	90.337	Papio_anubis
ENSCAFG00020025977	DDX50	92	94.109	ENSPEMG00000020899	-	93	93.997	Peromyscus_maniculatus_bairdii
ENSCAFG00020025977	DDX50	91	79.883	ENSPCIG00000016036	DDX50	95	79.913	Phascolarctos_cinereus
ENSCAFG00020025977	DDX50	91	98.811	ENSPPYG00000002390	DDX50	100	98.811	Pongo_abelii
ENSCAFG00020025977	DDX50	83	83.144	ENSPCAG00000009692	DDX50	100	83.144	Procavia_capensis
ENSCAFG00020025977	DDX50	79	91.045	ENSPCOG00000012574	DDX50	91	91.045	Propithecus_coquereli
ENSCAFG00020025977	DDX50	86	95.879	ENSPVAG00000009519	DDX50	78	95.879	Pteropus_vampyrus
ENSCAFG00020025977	DDX50	92	93.667	ENSRNOG00000000396	Ddx50	98	98.128	Rattus_norvegicus
ENSCAFG00020025977	DDX50	99	66.892	ENSRBIG00000039673	-	90	66.181	Rhinopithecus_bieti
ENSCAFG00020025977	DDX50	87	96.429	ENSRBIG00000042841	-	98	98.456	Rhinopithecus_bieti
ENSCAFG00020025977	DDX50	99	67.711	ENSRBIG00000036573	-	92	67.894	Rhinopithecus_bieti
ENSCAFG00020025977	DDX50	52	71.279	ENSRROG00000031940	-	88	75.076	Rhinopithecus_roxellana
ENSCAFG00020025977	DDX50	99	64.993	ENSRROG00000022853	-	92	64.611	Rhinopithecus_roxellana
ENSCAFG00020025977	DDX50	99	97.696	ENSRROG00000032158	DDX50	100	98.516	Rhinopithecus_roxellana
ENSCAFG00020025977	DDX50	92	86.303	ENSSBOG00000014441	DDX50	99	87.639	Saimiri_boliviensis_boliviensis
ENSCAFG00020025977	DDX50	88	81.032	ENSSHAG00000005690	DDX50	92	81.024	Sarcophilus_harrisii
ENSCAFG00020025977	DDX50	79	67.672	ENSSHAG00000005334	-	85	64.462	Sarcophilus_harrisii
ENSCAFG00020025977	DDX50	99	80.759	ENSSARG00000013553	DDX50	88	88.545	Sorex_araneus
ENSCAFG00020025977	DDX50	100	96.617	ENSSSCG00000010246	DDX50	100	96.617	Sus_scrofa
ENSCAFG00020025977	DDX50	96	74.860	ENSTBEG00000001085	DDX50	92	74.817	Tupaia_belangeri
ENSCAFG00020025977	DDX50	99	91.328	ENSTTRG00000012408	DDX50	99	91.328	Tursiops_truncatus
ENSCAFG00020025977	DDX50	99	99.187	ENSUAMG00000010976	DDX50	100	99.187	Ursus_americanus
ENSCAFG00020025977	DDX50	100	99.188	ENSUMAG00000007726	DDX50	100	99.188	Ursus_maritimus
ENSCAFG00020025977	DDX50	99	97.425	ENSVPAG00000000626	DDX50	100	97.425	Vicugna_pacos
ENSCAFG00020025977	DDX50	82	94.030	ENSVVUG00000020366	DDX50	98	100.000	Vulpes_vulpes