EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020025995 (Gene tree)
Gene ID: 112671261
Gene Symbol: LRPPRC
Alias: GP130|LRP130|LSFC
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 112959 bases
Position: chrQKWQ01001844.1:31296547-31409505
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020033797	PPR	PF01535.20	7.2e-31	1	6
ENSCAFP00020033797	PPR	PF01535.20	7.2e-31	2	6
ENSCAFP00020033797	PPR	PF01535.20	7.2e-31	3	6
ENSCAFP00020033797	PPR	PF01535.20	7.2e-31	4	6
ENSCAFP00020033797	PPR	PF01535.20	7.2e-31	5	6
ENSCAFP00020033797	PPR	PF01535.20	7.2e-31	6	6
ENSCAFP00020033738	PPR	PF01535.20	8.9e-31	1	6
ENSCAFP00020033738	PPR	PF01535.20	8.9e-31	2	6
ENSCAFP00020033738	PPR	PF01535.20	8.9e-31	3	6
ENSCAFP00020033738	PPR	PF01535.20	8.9e-31	4	6
ENSCAFP00020033738	PPR	PF01535.20	8.9e-31	5	6
ENSCAFP00020033738	PPR	PF01535.20	8.9e-31	6	6
ENSCAFP00020033799	PPR	PF01535.20	1.1e-30	1	6
ENSCAFP00020033799	PPR	PF01535.20	1.1e-30	2	6
ENSCAFP00020033799	PPR	PF01535.20	1.1e-30	3	6
ENSCAFP00020033799	PPR	PF01535.20	1.1e-30	4	6
ENSCAFP00020033799	PPR	PF01535.20	1.1e-30	5	6
ENSCAFP00020033799	PPR	PF01535.20	1.1e-30	6	6
ENSCAFP00020033793	PPR	PF01535.20	1.2e-30	1	6
ENSCAFP00020033793	PPR	PF01535.20	1.2e-30	2	6
ENSCAFP00020033793	PPR	PF01535.20	1.2e-30	3	6
ENSCAFP00020033793	PPR	PF01535.20	1.2e-30	4	6
ENSCAFP00020033793	PPR	PF01535.20	1.2e-30	5	6
ENSCAFP00020033793	PPR	PF01535.20	1.2e-30	6	6
ENSCAFP00020033798	PPR	PF01535.20	1.5e-30	1	6
ENSCAFP00020033798	PPR	PF01535.20	1.5e-30	2	6
ENSCAFP00020033798	PPR	PF01535.20	1.5e-30	3	6
ENSCAFP00020033798	PPR	PF01535.20	1.5e-30	4	6
ENSCAFP00020033798	PPR	PF01535.20	1.5e-30	5	6
ENSCAFP00020033798	PPR	PF01535.20	1.5e-30	6	6
ENSCAFP00020033801	PPR	PF01535.20	1.6e-30	1	6
ENSCAFP00020033801	PPR	PF01535.20	1.6e-30	2	6
ENSCAFP00020033801	PPR	PF01535.20	1.6e-30	3	6
ENSCAFP00020033801	PPR	PF01535.20	1.6e-30	4	6
ENSCAFP00020033801	PPR	PF01535.20	1.6e-30	5	6
ENSCAFP00020033801	PPR	PF01535.20	1.6e-30	6	6
ENSCAFP00020033794	PPR	PF01535.20	1.6e-30	1	6
ENSCAFP00020033794	PPR	PF01535.20	1.6e-30	2	6
ENSCAFP00020033794	PPR	PF01535.20	1.6e-30	3	6
ENSCAFP00020033794	PPR	PF01535.20	1.6e-30	4	6
ENSCAFP00020033794	PPR	PF01535.20	1.6e-30	5	6
ENSCAFP00020033794	PPR	PF01535.20	1.6e-30	6	6
ENSCAFP00020033796	PPR	PF01535.20	2e-30	1	6
ENSCAFP00020033796	PPR	PF01535.20	2e-30	2	6
ENSCAFP00020033796	PPR	PF01535.20	2e-30	3	6
ENSCAFP00020033796	PPR	PF01535.20	2e-30	4	6
ENSCAFP00020033796	PPR	PF01535.20	2e-30	5	6
ENSCAFP00020033796	PPR	PF01535.20	2e-30	6	6
ENSCAFP00020033800	PPR	PF01535.20	8.8e-29	1	6
ENSCAFP00020033800	PPR	PF01535.20	8.8e-29	2	6
ENSCAFP00020033800	PPR	PF01535.20	8.8e-29	3	6
ENSCAFP00020033800	PPR	PF01535.20	8.8e-29	4	6
ENSCAFP00020033800	PPR	PF01535.20	8.8e-29	5	6
ENSCAFP00020033800	PPR	PF01535.20	8.8e-29	6	6
ENSCAFP00020033795	PPR	PF01535.20	1.3e-28	1	6
ENSCAFP00020033795	PPR	PF01535.20	1.3e-28	2	6
ENSCAFP00020033795	PPR	PF01535.20	1.3e-28	3	6
ENSCAFP00020033795	PPR	PF01535.20	1.3e-28	4	6
ENSCAFP00020033795	PPR	PF01535.20	1.3e-28	5	6
ENSCAFP00020033795	PPR	PF01535.20	1.3e-28	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020038984	LRPPRC-204	4128	-	ENSCAFP00020033795	1375 (aa)	-	-
ENSCAFT00020038985	LRPPRC-205	4122	-	ENSCAFP00020033796	1373 (aa)	-	-
ENSCAFT00020038986	LRPPRC-206	3981	-	ENSCAFP00020033797	1326 (aa)	-	-
ENSCAFT00020038987	LRPPRC-207	4149	-	ENSCAFP00020033798	1382 (aa)	-	-
ENSCAFT00020038916	LRPPRC-201	4035	-	ENSCAFP00020033738	1344 (aa)	-	-
ENSCAFT00020038982	LRPPRC-202	4194	-	ENSCAFP00020033793	1397 (aa)	-	-
ENSCAFT00020038983	LRPPRC-203	4152	-	ENSCAFP00020033794	1383 (aa)	-	-
ENSCAFT00020038990	LRPPRC-210	4152	-	ENSCAFP00020033801	1383 (aa)	-	-
ENSCAFT00020038988	LRPPRC-208	4140	-	ENSCAFP00020033799	1379 (aa)	-	-
ENSCAFT00020038989	LRPPRC-209	4032	-	ENSCAFP00020033800	1343 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020025995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020025995's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020025995	LRPPRC	99	79.023	ENSG00000138095	LRPPRC	99	81.690	Homo_sapiens
ENSCAFG00020025995	LRPPRC	95	58.006	ENSAPLG00000008902	LRPPRC	100	58.162	Anas_platyrhynchos
ENSCAFG00020025995	LRPPRC	100	84.146	ENSBTAG00000016368	LRPPRC	100	84.146	Bos_taurus
ENSCAFG00020025995	LRPPRC	100	98.780	ENSCAFG00000002527	LRPPRC	100	98.780	Canis_familiaris
ENSCAFG00020025995	LRPPRC	98	83.333	ENSTSYG00000013197	LRPPRC	96	83.470	Carlito_syrichta
ENSCAFG00020025995	LRPPRC	99	63.146	ENSCPBG00000005446	LRPPRC	99	65.266	Chrysemys_picta_bellii
ENSCAFG00020025995	LRPPRC	79	31.887	FBgn0284256	bsf	78	31.883	Drosophila_melanogaster
ENSCAFG00020025995	LRPPRC	100	87.009	ENSEASG00005003715	LRPPRC	100	86.867	Equus_asinus_asinus
ENSCAFG00020025995	LRPPRC	98	87.047	ENSECAG00000023814	LRPPRC	95	86.730	Equus_caballus
ENSCAFG00020025995	LRPPRC	97	56.477	ENSGALG00000009967	LRPPRC	99	55.539	Gallus_gallus
ENSCAFG00020025995	LRPPRC	98	63.656	ENSGAGG00000020227	LRPPRC	98	63.590	Gopherus_agassizii
ENSCAFG00020025995	LRPPRC	99	80.301	ENSMLEG00000043673	LRPPRC	99	83.112	Mandrillus_leucophaeus
ENSCAFG00020025995	LRPPRC	97	56.996	ENSMGAG00000010201	LRPPRC	99	56.995	Meleagris_gallopavo
ENSCAFG00020025995	LRPPRC	99	75.162	MGP_CAROLIEiJ_G0021927	Lrpprc	99	75.233	Mus_caroli
ENSCAFG00020025995	LRPPRC	99	75.520	ENSMUSG00000024120	Lrpprc	99	75.664	Mus_musculus
ENSCAFG00020025995	LRPPRC	99	76.095	MGP_PahariEiJ_G0020917	Lrpprc	99	76.095	Mus_pahari
ENSCAFG00020025995	LRPPRC	99	75.449	MGP_SPRETEiJ_G0022843	Lrpprc	99	75.664	Mus_spretus
ENSCAFG00020025995	LRPPRC	87	55.738	ENSMEUG00000004430	-	94	55.738	Notamacropus_eugenii
ENSCAFG00020025995	LRPPRC	99	78.525	ENSPEMG00000022720	Lrpprc	99	78.597	Peromyscus_maniculatus_bairdii
ENSCAFG00020025995	LRPPRC	99	68.331	ENSPCIG00000006872	LRPPRC	99	68.046	Phascolarctos_cinereus
ENSCAFG00020025995	LRPPRC	100	84.127	ENSPCOG00000001309	LRPPRC	99	86.742	Propithecus_coquereli
ENSCAFG00020025995	LRPPRC	90	60.589	ENSSPUG00000005188	LRPPRC	99	60.817	Sphenodon_punctatus
ENSCAFG00020025995	LRPPRC	68	83.258	ENSTBEG00000011055	-	66	83.258	Tupaia_belangeri
ENSCAFG00020025995	LRPPRC	99	88.881	ENSUAMG00000022940	LRPPRC	99	88.881	Ursus_americanus
ENSCAFG00020025995	LRPPRC	99	88.666	ENSUMAG00000012801	LRPPRC	99	89.181	Ursus_maritimus
ENSCAFG00020025995	LRPPRC	100	98.282	ENSVVUG00000002339	LRPPRC	100	98.282	Vulpes_vulpes