EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020026019 (Gene tree)
Gene ID: 112661654
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 40421 bases
Position: chrQKWQ01001993.1:8626441-8666861
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020033535	RRM_1	PF00076.22	2.1e-09	1	1
ENSCAFP00020033528	RRM_1	PF00076.22	3e-09	1	1
ENSCAFP00020033543	RRM_1	PF00076.22	3.1e-09	1	1
ENSCAFP00020033522	RRM_1	PF00076.22	3.3e-09	1	1
ENSCAFP00020033519	RRM_1	PF00076.22	3.4e-09	1	1
ENSCAFP00020033515	RRM_1	PF00076.22	3.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020038679	SCAF4-205	2385	-	ENSCAFP00020033535	794 (aa)	-	-
ENSCAFT00020038664	SCAF4-203	3144	-	ENSCAFP00020033522	1047 (aa)	-	-
ENSCAFT00020038661	SCAF4-202	3273	-	ENSCAFP00020033519	1090 (aa)	-	-
ENSCAFT00020038670	SCAF4-204	3048	-	ENSCAFP00020033528	1015 (aa)	-	-
ENSCAFT00020038657	SCAF4-201	3396	-	ENSCAFP00020033515	1131 (aa)	-	-
ENSCAFT00020038693	SCAF4-206	3507	-	ENSCAFP00020033543	1001 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020026019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020026019's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020026019	SCAF4	100	94.187	ENSG00000156304	SCAF4	99	91.262	Homo_sapiens
ENSCAFG00020026019	SCAF4	68	62.353	ENSAPOG00000002946	scaf4a	54	58.605	Acanthochromis_polyacanthus
ENSCAFG00020026019	SCAF4	64	60.755	ENSAPOG00000019615	scaf4b	53	72.785	Acanthochromis_polyacanthus
ENSCAFG00020026019	SCAF4	85	97.183	ENSAMEG00000014987	SCAF4	100	97.183	Ailuropoda_melanoleuca
ENSCAFG00020026019	SCAF4	69	60.156	ENSAOCG00000000615	scaf4a	54	60.417	Amphiprion_ocellaris
ENSCAFG00020026019	SCAF4	77	52.126	ENSAOCG00000010433	scaf4b	53	74.051	Amphiprion_ocellaris
ENSCAFG00020026019	SCAF4	77	52.126	ENSAPEG00000010913	scaf4b	53	74.051	Amphiprion_percula
ENSCAFG00020026019	SCAF4	69	59.766	ENSAPEG00000021229	scaf4a	54	60.256	Amphiprion_percula
ENSCAFG00020026019	SCAF4	65	55.678	ENSATEG00000011758	scaf4b	59	67.513	Anabas_testudineus
ENSCAFG00020026019	SCAF4	100	73.767	ENSAPLG00000002509	SCAF4	58	80.408	Anas_platyrhynchos
ENSCAFG00020026019	SCAF4	100	92.118	ENSANAG00000037494	SCAF4	99	90.741	Aotus_nancymaae
ENSCAFG00020026019	SCAF4	67	59.551	ENSACLG00000024833	scaf4b	53	74.684	Astatotilapia_calliptera
ENSCAFG00020026019	SCAF4	90	45.550	ENSAMXG00000008585	scaf4a	59	60.748	Astyanax_mexicanus
ENSCAFG00020026019	SCAF4	100	93.465	ENSBTAG00000018855	SCAF4	99	92.471	Bos_taurus
ENSCAFG00020026019	SCAF4	100	92.126	ENSCJAG00000008993	SCAF4	99	91.013	Callithrix_jacchus
ENSCAFG00020026019	SCAF4	100	100.000	ENSCAFG00000008863	SCAF4	100	97.602	Canis_familiaris
ENSCAFG00020026019	SCAF4	100	92.878	ENSCHIG00000008385	SCAF4	99	92.035	Capra_hircus
ENSCAFG00020026019	SCAF4	92	94.032	ENSTSYG00000011344	SCAF4	98	92.025	Carlito_syrichta
ENSCAFG00020026019	SCAF4	100	88.549	ENSCPOG00000012443	SCAF4	99	87.633	Cavia_porcellus
ENSCAFG00020026019	SCAF4	100	93.880	ENSCCAG00000033727	SCAF4	99	91.943	Cebus_capucinus
ENSCAFG00020026019	SCAF4	100	92.345	ENSCATG00000030379	SCAF4	100	91.213	Cercocebus_atys
ENSCAFG00020026019	SCAF4	100	88.953	ENSCLAG00000006298	SCAF4	100	87.837	Chinchilla_lanigera
ENSCAFG00020026019	SCAF4	100	92.043	ENSCSAG00000009438	SCAF4	99	90.765	Chlorocebus_sabaeus
ENSCAFG00020026019	SCAF4	100	93.090	ENSCANG00000029847	SCAF4	99	91.873	Colobus_angolensis_palliatus
ENSCAFG00020026019	SCAF4	100	80.313	ENSCGRG00001020821	Scaf4	85	90.260	Cricetulus_griseus_chok1gshd
ENSCAFG00020026019	SCAF4	100	80.147	ENSCGRG00000014360	Scaf4	100	80.350	Cricetulus_griseus_crigri
ENSCAFG00020026019	SCAF4	79	50.627	ENSCSEG00000019549	scaf4a	52	56.426	Cynoglossus_semilaevis
ENSCAFG00020026019	SCAF4	62	58.015	ENSCSEG00000012808	-	53	68.354	Cynoglossus_semilaevis
ENSCAFG00020026019	SCAF4	57	61.749	ENSCVAG00000009142	scaf4b	53	72.152	Cyprinodon_variegatus
ENSCAFG00020026019	SCAF4	51	61.644	ENSDARG00000018854	scaf4b	56	61.644	Danio_rerio
ENSCAFG00020026019	SCAF4	85	54.595	ENSDARG00000077093	scaf4a	56	60.440	Danio_rerio
ENSCAFG00020026019	SCAF4	100	93.744	ENSDNOG00000019014	SCAF4	93	89.165	Dasypus_novemcinctus
ENSCAFG00020026019	SCAF4	96	84.592	ENSETEG00000000583	SCAF4	99	78.453	Echinops_telfairi
ENSCAFG00020026019	SCAF4	100	97.418	ENSEASG00005007756	SCAF4	99	95.402	Equus_asinus_asinus
ENSCAFG00020026019	SCAF4	100	97.222	ENSECAG00000014248	SCAF4	99	95.230	Equus_caballus
ENSCAFG00020026019	SCAF4	62	62.304	ENSELUG00000002779	SCAF8	66	68.841	Esox_lucius
ENSCAFG00020026019	SCAF4	100	97.228	ENSFCAG00000002228	SCAF4	99	95.035	Felis_catus
ENSCAFG00020026019	SCAF4	100	88.150	ENSFDAG00000017780	SCAF4	100	87.381	Fukomys_damarensis
ENSCAFG00020026019	SCAF4	69	56.089	ENSFHEG00000007634	scaf4b	53	72.152	Fundulus_heteroclitus
ENSCAFG00020026019	SCAF4	100	74.727	ENSGALG00000033965	SCAF4	58	79.937	Gallus_gallus
ENSCAFG00020026019	SCAF4	73	62.917	ENSGAFG00000019460	scaf4a	51	75.676	Gambusia_affinis
ENSCAFG00020026019	SCAF4	73	53.743	ENSGACG00000020580	scaf4a	52	70.122	Gasterosteus_aculeatus
ENSCAFG00020026019	SCAF4	52	61.780	ENSGACG00000006909	SCAF8	52	43.968	Gasterosteus_aculeatus
ENSCAFG00020026019	SCAF4	90	88.702	ENSGGOG00000015557	SCAF4	99	89.875	Gorilla_gorilla
ENSCAFG00020026019	SCAF4	77	64.314	ENSHBUG00000007920	scaf4a	53	60.247	Haplochromis_burtoni
ENSCAFG00020026019	SCAF4	100	90.490	ENSHGLG00000010582	SCAF4	99	89.640	Heterocephalus_glaber_female
ENSCAFG00020026019	SCAF4	100	90.490	ENSHGLG00100009441	SCAF4	100	89.640	Heterocephalus_glaber_male
ENSCAFG00020026019	SCAF4	50	68.254	ENSIPUG00000019311	-	55	66.901	Ictalurus_punctatus
ENSCAFG00020026019	SCAF4	71	64.286	ENSIPUG00000011285	scaf4	62	62.191	Ictalurus_punctatus
ENSCAFG00020026019	SCAF4	92	97.692	ENSSTOG00000004450	SCAF4	100	85.159	Ictidomys_tridecemlineatus
ENSCAFG00020026019	SCAF4	100	89.484	ENSJJAG00000019447	Scaf4	99	87.478	Jaculus_jaculus
ENSCAFG00020026019	SCAF4	69	57.519	ENSKMAG00000005742	scaf4b	52	74.522	Kryptolebias_marmoratus
ENSCAFG00020026019	SCAF4	81	52.528	ENSLBEG00000014675	scaf4a	54	56.094	Labrus_bergylta
ENSCAFG00020026019	SCAF4	99	58.977	ENSLACG00000013913	SCAF4	59	68.030	Latimeria_chalumnae
ENSCAFG00020026019	SCAF4	95	53.700	ENSLOCG00000009162	scaf4a	84	64.946	Lepisosteus_oculatus
ENSCAFG00020026019	SCAF4	100	94.595	ENSLAFG00000010710	SCAF4	99	91.822	Loxodonta_africana
ENSCAFG00020026019	SCAF4	100	92.074	ENSMFAG00000037668	SCAF4	99	90.710	Macaca_fascicularis
ENSCAFG00020026019	SCAF4	100	91.977	ENSMMUG00000001712	SCAF4	99	90.622	Macaca_mulatta
ENSCAFG00020026019	SCAF4	100	92.423	ENSMNEG00000032966	SCAF4	99	90.455	Macaca_nemestrina
ENSCAFG00020026019	SCAF4	100	92.157	ENSMLEG00000039674	SCAF4	99	90.781	Mandrillus_leucophaeus
ENSCAFG00020026019	SCAF4	77	60.784	ENSMZEG00005024349	scaf4a	54	60.092	Maylandia_zebra
ENSCAFG00020026019	SCAF4	100	74.554	ENSMGAG00000014515	SCAF4	58	80.595	Meleagris_gallopavo
ENSCAFG00020026019	SCAF4	100	86.588	ENSMAUG00000013307	Scaf4	100	87.045	Mesocricetus_auratus
ENSCAFG00020026019	SCAF4	100	94.554	ENSMICG00000005256	SCAF4	99	92.021	Microcebus_murinus
ENSCAFG00020026019	SCAF4	98	91.523	ENSMOCG00000012087	Scaf4	98	86.887	Microtus_ochrogaster
ENSCAFG00020026019	SCAF4	100	84.080	ENSMODG00000021040	SCAF4	99	83.363	Monodelphis_domestica
ENSCAFG00020026019	SCAF4	100	89.345	MGP_CAROLIEiJ_G0020944	Scaf4	94	86.778	Mus_caroli
ENSCAFG00020026019	SCAF4	100	89.032	ENSMUSG00000022983	Scaf4	99	83.200	Mus_musculus
ENSCAFG00020026019	SCAF4	98	88.220	MGP_PahariEiJ_G0016649	Scaf4	95	84.733	Mus_pahari
ENSCAFG00020026019	SCAF4	93	91.324	MGP_SPRETEiJ_G0021850	Scaf4	99	83.467	Mus_spretus
ENSCAFG00020026019	SCAF4	100	95.874	ENSMPUG00000001078	SCAF4	99	94.046	Mustela_putorius_furo
ENSCAFG00020026019	SCAF4	85	95.092	ENSMLUG00000011472	SCAF4	87	82.447	Myotis_lucifugus
ENSCAFG00020026019	SCAF4	100	88.856	ENSNGAG00000005214	Scaf4	99	88.899	Nannospalax_galili
ENSCAFG00020026019	SCAF4	100	93.990	ENSNLEG00000003569	SCAF4	99	91.174	Nomascus_leucogenys
ENSCAFG00020026019	SCAF4	78	96.774	ENSOPRG00000007016	SCAF4	75	89.674	Ochotona_princeps
ENSCAFG00020026019	SCAF4	100	88.395	ENSODEG00000002718	SCAF4	99	87.164	Octodon_degus
ENSCAFG00020026019	SCAF4	76	62.195	ENSONIG00000004687	scaf4a	80	51.273	Oreochromis_niloticus
ENSCAFG00020026019	SCAF4	52	70.667	ENSONIG00000005610	scaf4b	63	79.856	Oreochromis_niloticus
ENSCAFG00020026019	SCAF4	100	86.888	ENSOCUG00000008336	SCAF4	99	86.328	Oryctolagus_cuniculus
ENSCAFG00020026019	SCAF4	57	62.637	ENSORLG00000003420	scaf4b	62	64.789	Oryzias_latipes
ENSCAFG00020026019	SCAF4	92	54.607	ENSORLG00000004384	scaf4a	52	54.962	Oryzias_latipes
ENSCAFG00020026019	SCAF4	57	61.957	ENSORLG00020013853	scaf4b	55	74.522	Oryzias_latipes_hni
ENSCAFG00020026019	SCAF4	70	63.066	ENSORLG00020011857	scaf4a	52	57.274	Oryzias_latipes_hni
ENSCAFG00020026019	SCAF4	70	63.415	ENSORLG00015017880	scaf4a	52	58.499	Oryzias_latipes_hsok
ENSCAFG00020026019	SCAF4	99	95.954	ENSOGAG00000014653	SCAF4	93	92.162	Otolemur_garnettii
ENSCAFG00020026019	SCAF4	100	92.414	ENSOARG00000013894	SCAF4	98	91.623	Ovis_aries
ENSCAFG00020026019	SCAF4	100	94.187	ENSPPAG00000028535	SCAF4	99	91.262	Pan_paniscus
ENSCAFG00020026019	SCAF4	100	97.421	ENSPPRG00000000635	SCAF4	100	95.491	Panthera_pardus
ENSCAFG00020026019	SCAF4	100	93.918	ENSPTIG00000021578	SCAF4	99	88.035	Panthera_tigris_altaica
ENSCAFG00020026019	SCAF4	100	94.187	ENSPTRG00000013848	SCAF4	99	91.262	Pan_troglodytes
ENSCAFG00020026019	SCAF4	100	92.277	ENSPANG00000017332	SCAF4	99	91.148	Papio_anubis
ENSCAFG00020026019	SCAF4	75	65.517	ENSPKIG00000022408	scaf4a	88	64.462	Paramormyrops_kingsleyae
ENSCAFG00020026019	SCAF4	100	76.663	ENSPSIG00000014242	SCAF4	57	81.191	Pelodiscus_sinensis
ENSCAFG00020026019	SCAF4	63	52.083	ENSPMAG00000006192	SCAF8	57	63.758	Petromyzon_marinus
ENSCAFG00020026019	SCAF4	69	95.477	ENSPCIG00000028183	SCAF4	91	81.429	Phascolarctos_cinereus
ENSCAFG00020026019	SCAF4	74	60.000	ENSPFOG00000017156	scaf4a	64	57.339	Poecilia_formosa
ENSCAFG00020026019	SCAF4	67	54.212	ENSPLAG00000004403	-	52	71.338	Poecilia_latipinna
ENSCAFG00020026019	SCAF4	66	62.718	ENSPLAG00000001972	scaf4a	74	53.333	Poecilia_latipinna
ENSCAFG00020026019	SCAF4	67	54.579	ENSPMEG00000006666	-	52	71.975	Poecilia_mexicana
ENSCAFG00020026019	SCAF4	70	54.579	ENSPREG00000013510	scaf4b	52	71.975	Poecilia_reticulata
ENSCAFG00020026019	SCAF4	100	94.094	ENSPPYG00000011355	SCAF4	100	91.270	Pongo_abelii
ENSCAFG00020026019	SCAF4	100	81.764	ENSPCAG00000009998	SCAF4	99	79.167	Procavia_capensis
ENSCAFG00020026019	SCAF4	100	93.811	ENSPCOG00000018710	SCAF4	99	91.285	Propithecus_coquereli
ENSCAFG00020026019	SCAF4	100	96.116	ENSPVAG00000005220	SCAF4	99	93.500	Pteropus_vampyrus
ENSCAFG00020026019	SCAF4	67	58.801	ENSPNYG00000010526	scaf4b	53	74.684	Pundamilia_nyererei
ENSCAFG00020026019	SCAF4	80	60.452	ENSPNAG00000016892	scaf4a	58	61.846	Pygocentrus_nattereri
ENSCAFG00020026019	SCAF4	98	83.333	ENSRNOG00000002104	Scaf4	94	83.733	Rattus_norvegicus
ENSCAFG00020026019	SCAF4	100	91.214	ENSRBIG00000040007	SCAF4	99	88.958	Rhinopithecus_bieti
ENSCAFG00020026019	SCAF4	100	93.478	ENSRROG00000029488	SCAF4	99	92.131	Rhinopithecus_roxellana
ENSCAFG00020026019	SCAF4	100	84.148	ENSSHAG00000001581	SCAF4	99	83.066	Sarcophilus_harrisii
ENSCAFG00020026019	SCAF4	99	47.947	ENSSFOG00015006338	scaf4a	54	58.442	Scleropages_formosus
ENSCAFG00020026019	SCAF4	72	60.069	ENSSMAG00000017901	scaf4a	52	57.781	Scophthalmus_maximus
ENSCAFG00020026019	SCAF4	69	59.551	ENSSMAG00000003738	scaf4b	52	72.152	Scophthalmus_maximus
ENSCAFG00020026019	SCAF4	68	62.876	ENSSDUG00000012918	scaf4a	53	59.873	Seriola_dumerili
ENSCAFG00020026019	SCAF4	61	60.886	ENSSDUG00000012380	scaf4b	52	70.886	Seriola_dumerili
ENSCAFG00020026019	SCAF4	60	60.727	ENSSLDG00000023152	-	52	70.886	Seriola_lalandi_dorsalis
ENSCAFG00020026019	SCAF4	68	61.921	ENSSLDG00000021671	scaf4a	82	60.064	Seriola_lalandi_dorsalis
ENSCAFG00020026019	SCAF4	100	88.496	ENSSARG00000009994	SCAF4	99	88.028	Sorex_araneus
ENSCAFG00020026019	SCAF4	100	90.820	ENSSSCG00000021023	SCAF4	99	89.326	Sus_scrofa
ENSCAFG00020026019	SCAF4	85	78.550	ENSTGUG00000013464	SCAF4	83	75.758	Taeniopygia_guttata
ENSCAFG00020026019	SCAF4	69	57.993	ENSTRUG00000009536	-	60	61.809	Takifugu_rubripes
ENSCAFG00020026019	SCAF4	76	60.236	ENSTNIG00000009945	scaf4a	60	57.101	Tetraodon_nigroviridis
ENSCAFG00020026019	SCAF4	100	95.120	ENSTTRG00000010963	SCAF4	99	93.054	Tursiops_truncatus
ENSCAFG00020026019	SCAF4	100	96.208	ENSUAMG00000008860	SCAF4	99	93.310	Ursus_americanus
ENSCAFG00020026019	SCAF4	100	95.110	ENSUMAG00000016962	SCAF4	100	93.243	Ursus_maritimus
ENSCAFG00020026019	SCAF4	100	100.000	ENSVVUG00000002953	SCAF4	100	97.768	Vulpes_vulpes
ENSCAFG00020026019	SCAF4	94	61.179	ENSXETG00000007351	scaf4	51	82.390	Xenopus_tropicalis