EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020026094 (Gene tree)
Gene ID: 112678041
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 3981 bases
Position: chrQKWQ01002226.1:15725068-15729048
Accession: 112678041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020033608	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020038768	RAB5B-201	1748	-	ENSCAFP00020033608	215 (aa)	XP_025332860	UPI000000125D

Gene Model

Click here to download ENSCAFG00020026094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020026094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020026094	RAB5B	77	45.181	ENSCAFG00020002206	RAB6A	80	45.181
ENSCAFG00020026094	RAB5B	62	30.986	ENSCAFG00020009368	ARL8B	73	30.986
ENSCAFG00020026094	RAB5B	90	47.423	ENSCAFG00020022020	RAB22A	98	47.423
ENSCAFG00020026094	RAB5B	78	31.765	ENSCAFG00020007046	RERG	84	31.765
ENSCAFG00020026094	RAB5B	77	45.783	ENSCAFG00020027569	RAB6B	80	45.783
ENSCAFG00020026094	RAB5B	76	32.727	ENSCAFG00020012793	KRAS	90	31.579
ENSCAFG00020026094	RAB5B	90	37.949	ENSCAFG00020018913	RAB35	96	37.949
ENSCAFG00020026094	RAB5B	100	81.860	ENSCAFG00020027287	RAB5A	100	81.860
ENSCAFG00020026094	RAB5B	80	42.222	ENSCAFG00020003253	RAB18	85	42.938
ENSCAFG00020026094	RAB5B	83	37.705	ENSCAFG00020001403	RAB33A	77	37.705
ENSCAFG00020026094	RAB5B	76	32.727	ENSCAFG00020007059	HRAS	87	34.000
ENSCAFG00020026094	RAB5B	78	42.857	ENSCAFG00020017865	RAB30	83	42.857
ENSCAFG00020026094	RAB5B	91	43.689	ENSCAFG00020022184	RAB11B	94	43.689
ENSCAFG00020026094	RAB5B	78	42.442	ENSCAFG00020004847	RAB7A	83	42.442
ENSCAFG00020026094	RAB5B	82	33.333	ENSCAFG00020005505	RHEB	93	33.333
ENSCAFG00020026094	RAB5B	93	35.294	ENSCAFG00020002812	RAB9A	99	35.294
ENSCAFG00020026094	RAB5B	97	86.124	ENSCAFG00020013537	RAB5C	97	86.124
ENSCAFG00020026094	RAB5B	82	45.198	ENSCAFG00020015406	-	87	45.198
ENSCAFG00020026094	RAB5B	73	43.038	ENSCAFG00020021797	-	72	43.038
ENSCAFG00020026094	RAB5B	75	47.205	ENSCAFG00020008478	RAB11A	75	47.205
ENSCAFG00020026094	RAB5B	75	45.342	ENSCAFG00020006179	RAB25	76	45.342
ENSCAFG00020026094	RAB5B	60	41.085	ENSCAFG00020006867	RAB15	55	41.085
ENSCAFG00020026094	RAB5B	75	44.720	ENSCAFG00020009287	RAB14	75	44.720
ENSCAFG00020026094	RAB5B	62	30.282	ENSCAFG00020016164	ARL8A	73	30.282
ENSCAFG00020026094	RAB5B	74	37.500	ENSCAFG00020015900	RAB23	67	37.500
ENSCAFG00020026094	RAB5B	80	32.749	ENSCAFG00020003142	-	76	32.749
ENSCAFG00020026094	RAB5B	82	39.344	ENSCAFG00020020861	RAB33B	79	39.344
ENSCAFG00020026094	RAB5B	90	43.367	ENSCAFG00020026971	RAB1A	95	43.367
ENSCAFG00020026094	RAB5B	71	37.255	ENSCAFG00020006938	-	67	37.255
ENSCAFG00020026094	RAB5B	78	35.882	ENSCAFG00020008673	RAB39B	80	35.882
ENSCAFG00020026094	RAB5B	85	35.326	ENSCAFG00020023721	RAB12	65	35.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020026094	RAB5B	100	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSCAFG00020026094	RAB5B	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSCAFG00020026094	RAB5B	100	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSCAFG00020026094	RAB5B	100	100.000	ENSANAG00000033215	RAB5B	95	100.000	Aotus_nancymaae
ENSCAFG00020026094	RAB5B	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSCAFG00020026094	RAB5B	100	100.000	ENSCJAG00000041780	RAB5B	95	100.000	Callithrix_jacchus
ENSCAFG00020026094	RAB5B	100	100.000	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
ENSCAFG00020026094	RAB5B	97	100.000	ENSCHIG00000010333	RAB5B	96	100.000	Capra_hircus
ENSCAFG00020026094	RAB5B	100	99.535	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
ENSCAFG00020026094	RAB5B	100	100.000	ENSCPOG00000034818	RAB5B	100	100.000	Cavia_porcellus
ENSCAFG00020026094	RAB5B	100	99.070	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
ENSCAFG00020026094	RAB5B	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSCAFG00020026094	RAB5B	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSCAFG00020026094	RAB5B	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSCAFG00020026094	RAB5B	100	99.535	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
ENSCAFG00020026094	RAB5B	100	99.535	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
ENSCAFG00020026094	RAB5B	100	100.000	ENSDORG00000025063	Rab5b	100	100.000	Dipodomys_ordii
ENSCAFG00020026094	RAB5B	100	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSCAFG00020026094	RAB5B	100	99.070	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
ENSCAFG00020026094	RAB5B	100	100.000	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
ENSCAFG00020026094	RAB5B	100	99.070	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
ENSCAFG00020026094	RAB5B	100	99.070	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
ENSCAFG00020026094	RAB5B	100	98.605	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
ENSCAFG00020026094	RAB5B	100	99.535	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
ENSCAFG00020026094	RAB5B	100	99.078	ENSLAFG00000018009	RAB5B	95	99.078	Loxodonta_africana
ENSCAFG00020026094	RAB5B	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSCAFG00020026094	RAB5B	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSCAFG00020026094	RAB5B	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSCAFG00020026094	RAB5B	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSCAFG00020026094	RAB5B	100	100.000	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
ENSCAFG00020026094	RAB5B	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSCAFG00020026094	RAB5B	100	100.000	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
ENSCAFG00020026094	RAB5B	100	100.000	MGP_PahariEiJ_G0031135	Rab5b	100	100.000	Mus_pahari
ENSCAFG00020026094	RAB5B	100	99.535	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
ENSCAFG00020026094	RAB5B	99	98.611	ENSMPUG00000000946	RAB5B	89	98.611	Mustela_putorius_furo
ENSCAFG00020026094	RAB5B	100	100.000	ENSNLEG00000017570	-	100	100.000	Nomascus_leucogenys
ENSCAFG00020026094	RAB5B	100	100.000	ENSOPRG00000007883	RAB5B	100	100.000	Ochotona_princeps
ENSCAFG00020026094	RAB5B	100	99.535	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
ENSCAFG00020026094	RAB5B	100	100.000	ENSOCUG00000013895	RAB5B	95	100.000	Oryctolagus_cuniculus
ENSCAFG00020026094	RAB5B	100	100.000	ENSOARG00000010651	RAB5B	95	100.000	Ovis_aries
ENSCAFG00020026094	RAB5B	100	100.000	ENSPPAG00000035431	RAB5B	100	100.000	Pan_paniscus
ENSCAFG00020026094	RAB5B	100	100.000	ENSPTRG00000005071	RAB5B	97	99.522	Pan_troglodytes
ENSCAFG00020026094	RAB5B	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSCAFG00020026094	RAB5B	100	100.000	ENSPCOG00000016461	RAB5B	100	100.000	Propithecus_coquereli
ENSCAFG00020026094	RAB5B	100	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSCAFG00020026094	RAB5B	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSCAFG00020026094	RAB5B	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSCAFG00020026094	RAB5B	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSCAFG00020026094	RAB5B	100	98.605	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
ENSCAFG00020026094	RAB5B	100	100.000	ENSSARG00000006237	RAB5B	100	100.000	Sorex_araneus
ENSCAFG00020026094	RAB5B	100	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSCAFG00020026094	RAB5B	100	100.000	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
ENSCAFG00020026094	RAB5B	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSCAFG00020026094	RAB5B	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSCAFG00020026094	RAB5B	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes