EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020026232 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 5521 bases
Position: chrQKWQ01000317.1:3788489-3794009
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020033779	RRM_1	PF00076.22	9.8e-28	1	2
ENSCAFP00020033779	RRM_1	PF00076.22	9.8e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020038968	-	453	-	ENSCAFP00020033779	150 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020026232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020026232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020026232	-	86	32.099	ENSCAFG00020013828	PABPC1L	59	32.099
ENSCAFG00020026232	-	86	30.645	ENSCAFG00020000440	PABPC1	50	30.645
ENSCAFG00020026232	-	96	97.222	ENSCAFG00020022841	-	56	97.222
ENSCAFG00020026232	-	58	31.034	ENSCAFG00020002518	-	56	31.034
ENSCAFG00020026232	-	86	69.767	ENSCAFG00020004614	ELAVL3	52	69.767
ENSCAFG00020026232	-	94	68.794	ENSCAFG00020013581	ELAVL4	75	68.794
ENSCAFG00020026232	-	83	31.915	ENSCAFG00020009731	CELF3	51	31.915
ENSCAFG00020026232	-	86	30.534	ENSCAFG00020002052	-	63	30.534
ENSCAFG00020026232	-	84	74.603	ENSCAFG00020013836	ELAVL2	54	74.603

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020026232	-	100	93.464	ENSG00000066044	ELAVL1	100	93.464	Homo_sapiens
ENSCAFG00020026232	-	95	75.352	ENSAPOG00000001912	-	71	78.462	Acanthochromis_polyacanthus
ENSCAFG00020026232	-	96	97.222	ENSAMEG00000008657	ELAVL1	55	97.222	Ailuropoda_melanoleuca
ENSCAFG00020026232	-	96	84.028	ENSACIG00000018226	elavl1a	55	84.028	Amphilophus_citrinellus
ENSCAFG00020026232	-	95	74.648	ENSAOCG00000023751	-	70	74.648	Amphiprion_ocellaris
ENSCAFG00020026232	-	97	82.069	ENSAOCG00000020018	elavl1a	61	83.065	Amphiprion_ocellaris
ENSCAFG00020026232	-	97	82.069	ENSAPEG00000012830	elavl1a	61	83.065	Amphiprion_percula
ENSCAFG00020026232	-	95	74.648	ENSAPEG00000003694	-	71	77.692	Amphiprion_percula
ENSCAFG00020026232	-	93	74.286	ENSATEG00000006741	-	60	74.286	Anabas_testudineus
ENSCAFG00020026232	-	96	96.528	ENSAPLG00000003139	ELAVL1	56	96.528	Anas_platyrhynchos
ENSCAFG00020026232	-	94	95.035	ENSANAG00000037170	-	99	89.933	Aotus_nancymaae
ENSCAFG00020026232	-	96	88.194	ENSANAG00000031135	-	69	88.194	Aotus_nancymaae
ENSCAFG00020026232	-	91	94.161	ENSANAG00000027297	-	95	94.161	Aotus_nancymaae
ENSCAFG00020026232	-	99	81.757	ENSACLG00000009328	elavl1a	55	81.757	Astatotilapia_calliptera
ENSCAFG00020026232	-	96	81.250	ENSAMXG00000006391	elavl1b	54	81.250	Astyanax_mexicanus
ENSCAFG00020026232	-	96	81.944	ENSAMXG00000031223	elavl1a	74	81.944	Astyanax_mexicanus
ENSCAFG00020026232	-	96	96.528	ENSBTAG00000000613	ELAVL1	56	96.528	Bos_taurus
ENSCAFG00020026232	-	96	96.528	ENSCJAG00000046587	ELAVL1	100	92.157	Callithrix_jacchus
ENSCAFG00020026232	-	96	97.222	ENSCAFG00000018353	-	55	97.222	Canis_familiaris
ENSCAFG00020026232	-	96	96.528	ENSCHIG00000014334	ELAVL1	56	96.528	Capra_hircus
ENSCAFG00020026232	-	99	94.595	ENSTSYG00000008248	ELAVL1	97	94.595	Carlito_syrichta
ENSCAFG00020026232	-	83	85.577	ENSCAPG00000009014	ELAVL1	71	85.577	Cavia_aperea
ENSCAFG00020026232	-	90	78.448	ENSCPOG00000011884	ELAVL1	76	78.448	Cavia_porcellus
ENSCAFG00020026232	-	96	96.528	ENSCCAG00000025328	ELAVL1	100	92.157	Cebus_capucinus
ENSCAFG00020026232	-	96	96.528	ENSCATG00000032090	ELAVL1	94	96.528	Cercocebus_atys
ENSCAFG00020026232	-	96	97.222	ENSCLAG00000007826	ELAVL1	56	97.222	Chinchilla_lanigera
ENSCAFG00020026232	-	96	96.528	ENSCSAG00000008155	ELAVL1	56	96.528	Chlorocebus_sabaeus
ENSCAFG00020026232	-	90	96.512	ENSCHOG00000006810	-	73	96.512	Choloepus_hoffmanni
ENSCAFG00020026232	-	96	96.528	ENSCPBG00000017097	ELAVL1	61	96.528	Chrysemys_picta_bellii
ENSCAFG00020026232	-	100	92.810	ENSCANG00000041972	ELAVL1	100	92.810	Colobus_angolensis_palliatus
ENSCAFG00020026232	-	96	95.833	ENSCGRG00001013676	Elavl1	56	95.833	Cricetulus_griseus_chok1gshd
ENSCAFG00020026232	-	96	95.833	ENSCGRG00000001625	Elavl1	56	95.833	Cricetulus_griseus_crigri
ENSCAFG00020026232	-	95	75.524	ENSCSEG00000000688	-	70	75.524	Cynoglossus_semilaevis
ENSCAFG00020026232	-	95	76.761	ENSCVAG00000016617	-	71	76.761	Cyprinodon_variegatus
ENSCAFG00020026232	-	97	81.379	ENSCVAG00000017170	elavl1a	65	81.379	Cyprinodon_variegatus
ENSCAFG00020026232	-	96	77.778	ENSDARG00000101744	elavl1b	78	77.778	Danio_rerio
ENSCAFG00020026232	-	96	81.944	ENSDARG00000038695	elavl1a	85	82.418	Danio_rerio
ENSCAFG00020026232	-	96	97.222	ENSDNOG00000008797	ELAVL1	56	97.222	Dasypus_novemcinctus
ENSCAFG00020026232	-	96	95.833	ENSDORG00000009158	Elavl1	56	95.833	Dipodomys_ordii
ENSCAFG00020026232	-	90	96.512	ENSETEG00000012985	ELAVL1	73	96.512	Echinops_telfairi
ENSCAFG00020026232	-	96	96.528	ENSEASG00005003790	ELAVL1	56	96.528	Equus_asinus_asinus
ENSCAFG00020026232	-	96	96.528	ENSECAG00000019459	ELAVL1	56	96.528	Equus_caballus
ENSCAFG00020026232	-	95	82.394	ENSELUG00000003289	-	74	82.394	Esox_lucius
ENSCAFG00020026232	-	96	79.861	ENSELUG00000008024	elavl1a	54	79.861	Esox_lucius
ENSCAFG00020026232	-	96	97.222	ENSFCAG00000034143	ELAVL1	93	97.902	Felis_catus
ENSCAFG00020026232	-	96	97.222	ENSFDAG00000021259	ELAVL1	56	97.222	Fukomys_damarensis
ENSCAFG00020026232	-	99	79.730	ENSFHEG00000015979	elavl1a	79	80.000	Fundulus_heteroclitus
ENSCAFG00020026232	-	91	81.538	ENSFHEG00000014715	-	73	81.538	Fundulus_heteroclitus
ENSCAFG00020026232	-	97	53.299	ENSGMOG00000014008	-	63	53.299	Gadus_morhua
ENSCAFG00020026232	-	96	96.528	ENSGALG00000000726	ELAVL1	56	96.528	Gallus_gallus
ENSCAFG00020026232	-	91	81.538	ENSGAFG00000000715	-	72	81.538	Gambusia_affinis
ENSCAFG00020026232	-	99	79.730	ENSGAFG00000019133	elavl1a	62	79.730	Gambusia_affinis
ENSCAFG00020026232	-	99	81.757	ENSGACG00000010657	elavl1a	78	81.757	Gasterosteus_aculeatus
ENSCAFG00020026232	-	95	76.056	ENSGACG00000013329	-	66	76.056	Gasterosteus_aculeatus
ENSCAFG00020026232	-	96	96.528	ENSGAGG00000024119	ELAVL1	56	96.528	Gopherus_agassizii
ENSCAFG00020026232	-	100	93.464	ENSGGOG00000006100	ELAVL1	100	93.464	Gorilla_gorilla
ENSCAFG00020026232	-	97	82.877	ENSHBUG00000007897	elavl1a	67	82.609	Haplochromis_burtoni
ENSCAFG00020026232	-	96	92.361	ENSHGLG00000008478	-	82	92.361	Heterocephalus_glaber_female
ENSCAFG00020026232	-	96	97.222	ENSHGLG00000016101	ELAVL1	56	97.222	Heterocephalus_glaber_female
ENSCAFG00020026232	-	96	92.361	ENSHGLG00100000375	-	82	92.361	Heterocephalus_glaber_male
ENSCAFG00020026232	-	96	97.222	ENSHGLG00100007070	ELAVL1	56	97.222	Heterocephalus_glaber_male
ENSCAFG00020026232	-	99	73.649	ENSHCOG00000015240	elavl1a	62	74.306	Hippocampus_comes
ENSCAFG00020026232	-	95	74.648	ENSHCOG00000020439	-	65	74.648	Hippocampus_comes
ENSCAFG00020026232	-	96	77.083	ENSIPUG00000015781	elavl1b	58	77.083	Ictalurus_punctatus
ENSCAFG00020026232	-	96	82.639	ENSIPUG00000014082	elavl1a	50	82.639	Ictalurus_punctatus
ENSCAFG00020026232	-	96	97.222	ENSSTOG00000009130	ELAVL1	56	97.222	Ictidomys_tridecemlineatus
ENSCAFG00020026232	-	96	95.833	ENSJJAG00000015838	Elavl1	56	95.833	Jaculus_jaculus
ENSCAFG00020026232	-	91	80.000	ENSKMAG00000006259	-	70	80.000	Kryptolebias_marmoratus
ENSCAFG00020026232	-	96	79.861	ENSKMAG00000014042	elavl1a	62	79.861	Kryptolebias_marmoratus
ENSCAFG00020026232	-	95	75.524	ENSLBEG00000028513	-	58	75.524	Labrus_bergylta
ENSCAFG00020026232	-	96	81.944	ENSLBEG00000021924	elavl1a	55	81.944	Labrus_bergylta
ENSCAFG00020026232	-	96	90.972	ENSLACG00000017607	ELAVL1	77	89.726	Latimeria_chalumnae
ENSCAFG00020026232	-	96	84.028	ENSLOCG00000000284	elavl1b	54	84.028	Lepisosteus_oculatus
ENSCAFG00020026232	-	96	97.222	ENSLAFG00000004219	ELAVL1	56	97.222	Loxodonta_africana
ENSCAFG00020026232	-	96	96.528	ENSMFAG00000040787	ELAVL1	93	97.203	Macaca_fascicularis
ENSCAFG00020026232	-	96	96.528	ENSMMUG00000006544	ELAVL1	93	97.203	Macaca_mulatta
ENSCAFG00020026232	-	96	96.528	ENSMNEG00000028431	ELAVL1	93	97.203	Macaca_nemestrina
ENSCAFG00020026232	-	100	92.810	ENSMLEG00000037227	ELAVL1	100	92.810	Mandrillus_leucophaeus
ENSCAFG00020026232	-	95	74.648	ENSMAMG00000006701	-	62	74.648	Mastacembelus_armatus
ENSCAFG00020026232	-	99	81.757	ENSMZEG00005015772	elavl1a	55	81.757	Maylandia_zebra
ENSCAFG00020026232	-	83	95.455	ENSMGAG00000001015	ELAVL1	85	95.455	Meleagris_gallopavo
ENSCAFG00020026232	-	96	95.833	ENSMAUG00000000924	Elavl1	56	95.833	Mesocricetus_auratus
ENSCAFG00020026232	-	96	96.528	ENSMICG00000009699	ELAVL1	95	97.203	Microcebus_murinus
ENSCAFG00020026232	-	96	95.833	ENSMOCG00000014588	Elavl1	56	95.833	Microtus_ochrogaster
ENSCAFG00020026232	-	96	81.944	ENSMMOG00000011938	elavl1a	72	81.944	Mola_mola
ENSCAFG00020026232	-	91	76.471	ENSMMOG00000008014	-	73	76.471	Mola_mola
ENSCAFG00020026232	-	95	76.056	ENSMALG00000021265	-	63	80.000	Monopterus_albus
ENSCAFG00020026232	-	96	95.833	MGP_CAROLIEiJ_G0030798	Elavl1	56	95.833	Mus_caroli
ENSCAFG00020026232	-	96	95.833	ENSMUSG00000040028	Elavl1	56	95.833	Mus_musculus
ENSCAFG00020026232	-	96	95.833	MGP_PahariEiJ_G0021261	Elavl1	56	95.833	Mus_pahari
ENSCAFG00020026232	-	96	95.833	MGP_SPRETEiJ_G0031906	Elavl1	56	95.833	Mus_spretus
ENSCAFG00020026232	-	96	97.222	ENSMPUG00000007991	ELAVL1	56	97.222	Mustela_putorius_furo
ENSCAFG00020026232	-	96	96.528	ENSMLUG00000008101	-	55	96.528	Myotis_lucifugus
ENSCAFG00020026232	-	96	95.833	ENSNGAG00000019590	Elavl1	56	95.833	Nannospalax_galili
ENSCAFG00020026232	-	99	82.432	ENSNBRG00000021290	elavl1a	55	82.432	Neolamprologus_brichardi
ENSCAFG00020026232	-	100	92.810	ENSNLEG00000001325	ELAVL1	100	92.810	Nomascus_leucogenys
ENSCAFG00020026232	-	96	95.833	ENSOPRG00000009691	-	56	95.833	Ochotona_princeps
ENSCAFG00020026232	-	96	97.222	ENSODEG00000012189	ELAVL1	56	97.222	Octodon_degus
ENSCAFG00020026232	-	97	83.448	ENSONIG00000001096	elavl1a	54	83.448	Oreochromis_niloticus
ENSCAFG00020026232	-	96	96.528	ENSOANG00000022373	-	95	96.528	Ornithorhynchus_anatinus
ENSCAFG00020026232	-	95	76.224	ENSORLG00000000087	-	66	76.224	Oryzias_latipes
ENSCAFG00020026232	-	97	80.690	ENSORLG00000012435	elavl1a	56	80.690	Oryzias_latipes
ENSCAFG00020026232	-	97	80.690	ENSORLG00020019326	elavl1a	56	80.690	Oryzias_latipes_hni
ENSCAFG00020026232	-	95	76.224	ENSORLG00020012447	-	66	76.224	Oryzias_latipes_hni
ENSCAFG00020026232	-	95	76.224	ENSORLG00015008332	-	66	76.224	Oryzias_latipes_hsok
ENSCAFG00020026232	-	97	80.690	ENSORLG00015016801	elavl1a	56	80.690	Oryzias_latipes_hsok
ENSCAFG00020026232	-	95	76.224	ENSOMEG00000015322	-	69	74.150	Oryzias_melastigma
ENSCAFG00020026232	-	97	80.690	ENSOMEG00000015457	elavl1a	76	80.690	Oryzias_melastigma
ENSCAFG00020026232	-	96	96.528	ENSOGAG00000012877	ELAVL1	56	96.528	Otolemur_garnettii
ENSCAFG00020026232	-	96	96.528	ENSOARG00000003168	ELAVL1	54	96.528	Ovis_aries
ENSCAFG00020026232	-	100	93.464	ENSPPAG00000035262	ELAVL1	100	93.464	Pan_paniscus
ENSCAFG00020026232	-	96	97.222	ENSPPRG00000002521	ELAVL1	93	97.902	Panthera_pardus
ENSCAFG00020026232	-	96	97.222	ENSPTIG00000013602	ELAVL1	93	97.902	Panthera_tigris_altaica
ENSCAFG00020026232	-	100	93.464	ENSPTRG00000010413	ELAVL1	100	93.464	Pan_troglodytes
ENSCAFG00020026232	-	100	92.810	ENSPANG00000025878	ELAVL1	100	92.810	Papio_anubis
ENSCAFG00020026232	-	96	84.722	ENSPKIG00000003894	ELAVL1	74	84.722	Paramormyrops_kingsleyae
ENSCAFG00020026232	-	96	96.528	ENSPSIG00000013736	ELAVL1	56	96.528	Pelodiscus_sinensis
ENSCAFG00020026232	-	95	75.000	ENSPMGG00000015593	-	75	75.000	Periophthalmus_magnuspinnatus
ENSCAFG00020026232	-	97	75.862	ENSPMGG00000015849	elavl1a	81	75.862	Periophthalmus_magnuspinnatus
ENSCAFG00020026232	-	97	80.690	ENSPFOG00000014116	elavl1a	61	80.690	Poecilia_formosa
ENSCAFG00020026232	-	95	77.465	ENSPFOG00000009739	ELAVL1	71	77.465	Poecilia_formosa
ENSCAFG00020026232	-	91	81.538	ENSPLAG00000020810	ELAVL1	72	81.538	Poecilia_latipinna
ENSCAFG00020026232	-	97	80.690	ENSPLAG00000008127	elavl1a	61	80.690	Poecilia_latipinna
ENSCAFG00020026232	-	97	80.690	ENSPMEG00000002868	elavl1a	61	80.690	Poecilia_mexicana
ENSCAFG00020026232	-	91	81.538	ENSPMEG00000000283	ELAVL1	72	81.538	Poecilia_mexicana
ENSCAFG00020026232	-	91	81.538	ENSPREG00000005877	-	72	81.538	Poecilia_reticulata
ENSCAFG00020026232	-	97	80.690	ENSPREG00000011054	elavl1a	61	80.690	Poecilia_reticulata
ENSCAFG00020026232	-	96	96.528	ENSPPYG00000009496	ELAVL1	56	96.528	Pongo_abelii
ENSCAFG00020026232	-	90	96.512	ENSPCAG00000016012	ELAVL1	73	96.512	Procavia_capensis
ENSCAFG00020026232	-	100	94.667	ENSPCOG00000003300	ELAVL1	96	94.667	Propithecus_coquereli
ENSCAFG00020026232	-	96	75.694	ENSPVAG00000002299	ELAVL1	56	75.694	Pteropus_vampyrus
ENSCAFG00020026232	-	99	81.757	ENSPNYG00000012769	elavl1a	55	81.757	Pundamilia_nyererei
ENSCAFG00020026232	-	96	81.250	ENSPNAG00000010909	elavl1a	76	81.250	Pygocentrus_nattereri
ENSCAFG00020026232	-	96	80.556	ENSPNAG00000024381	elavl1b	74	80.556	Pygocentrus_nattereri
ENSCAFG00020026232	-	96	95.833	ENSRNOG00000001069	Elavl1	56	95.833	Rattus_norvegicus
ENSCAFG00020026232	-	100	92.810	ENSRBIG00000032339	-	100	92.810	Rhinopithecus_bieti
ENSCAFG00020026232	-	100	84.106	ENSRBIG00000029014	-	99	84.106	Rhinopithecus_bieti
ENSCAFG00020026232	-	100	92.810	ENSRROG00000037769	ELAVL1	100	92.810	Rhinopithecus_roxellana
ENSCAFG00020026232	-	96	96.528	ENSSBOG00000028871	ELAVL1	100	92.157	Saimiri_boliviensis_boliviensis
ENSCAFG00020026232	-	96	97.222	ENSSHAG00000008109	ELAVL1	56	97.222	Sarcophilus_harrisii
ENSCAFG00020026232	-	96	84.028	ENSSFOG00015017503	-	54	84.028	Scleropages_formosus
ENSCAFG00020026232	-	96	83.333	ENSSFOG00015021786	ELAVL1	74	83.333	Scleropages_formosus
ENSCAFG00020026232	-	95	75.352	ENSSDUG00000015257	-	72	76.087	Seriola_dumerili
ENSCAFG00020026232	-	95	75.352	ENSSLDG00000019362	-	72	76.087	Seriola_lalandi_dorsalis
ENSCAFG00020026232	-	96	95.833	ENSSPUG00000002077	ELAVL1	56	95.833	Sphenodon_punctatus
ENSCAFG00020026232	-	95	75.352	ENSSPAG00000011250	-	62	78.462	Stegastes_partitus
ENSCAFG00020026232	-	96	95.139	ENSSSCG00000013592	ELAVL1	78	95.139	Sus_scrofa
ENSCAFG00020026232	-	96	96.528	ENSTGUG00000000118	ELAVL1	56	96.528	Taeniopygia_guttata
ENSCAFG00020026232	-	97	82.759	ENSTRUG00000023704	elavl1a	67	82.759	Takifugu_rubripes
ENSCAFG00020026232	-	96	80.822	ENSTNIG00000019823	elavl1a	71	80.822	Tetraodon_nigroviridis
ENSCAFG00020026232	-	95	59.310	ENSTNIG00000004733	-	63	59.310	Tetraodon_nigroviridis
ENSCAFG00020026232	-	96	72.917	ENSTTRG00000010180	ELAVL1	56	72.917	Tursiops_truncatus
ENSCAFG00020026232	-	96	97.222	ENSUAMG00000022313	ELAVL1	53	97.222	Ursus_americanus
ENSCAFG00020026232	-	96	97.222	ENSUMAG00000014798	ELAVL1	53	97.222	Ursus_maritimus
ENSCAFG00020026232	-	96	97.222	ENSVVUG00000026988	-	53	97.222	Vulpes_vulpes
ENSCAFG00020026232	-	90	94.444	ENSVVUG00000003187	-	61	89.286	Vulpes_vulpes
ENSCAFG00020026232	-	96	90.278	ENSXETG00000008752	elavl1	78	90.278	Xenopus_tropicalis
ENSCAFG00020026232	-	96	79.861	ENSXCOG00000014236	elavl1a	80	79.861	Xiphophorus_couchianus
ENSCAFG00020026232	-	85	83.465	ENSXCOG00000008068	-	88	83.465	Xiphophorus_couchianus
ENSCAFG00020026232	-	95	77.465	ENSXMAG00000030088	-	66	77.465	Xiphophorus_maculatus
ENSCAFG00020026232	-	97	80.000	ENSXMAG00000009362	elavl1a	75	80.000	Xiphophorus_maculatus