EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020026284 (Gene tree)
Gene ID: 112671448
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 184412 bases
Position: chrQKWQ01001844.1:32715490-32899901
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020033975	S1	PF00575.23	3e-10	1	1
ENSCAFP00020033968	S1	PF00575.23	3.1e-09	1	1
ENSCAFP00020033971	S1	PF00575.23	3.6e-09	1	1
ENSCAFP00020033941	S1	PF00575.23	8.2e-09	1	1
ENSCAFP00020033949	S1	PF00575.23	8.6e-09	1	1
ENSCAFP00020033940	S1	PF00575.23	8.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020039191	SRBD1-205	2505	-	ENSCAFP00020033968	834 (aa)	-	-
ENSCAFT00020039194	SRBD1-206	3063	-	ENSCAFP00020033971	1020 (aa)	-	-
ENSCAFT00020039199	SRBD1-207	519	-	ENSCAFP00020033975	172 (aa)	-	-
ENSCAFT00020039160	SRBD1-202	3003	-	ENSCAFP00020033940	1000 (aa)	-	-
ENSCAFT00020039156	SRBD1-201	2892	-	ENSCAFP00020033936	963 (aa)	-	-
ENSCAFT00020039162	SRBD1-203	2826	-	ENSCAFP00020033941	941 (aa)	-	-
ENSCAFT00020039170	SRBD1-204	2931	-	ENSCAFP00020033949	976 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020026284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020026284's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020026284	SRBD1	99	89.895	ENSG00000068784	SRBD1	100	86.948	Homo_sapiens
ENSCAFG00020026284	SRBD1	97	57.995	ENSAPOG00000005103	si:ch211-117n7.8	93	50.982	Acanthochromis_polyacanthus
ENSCAFG00020026284	SRBD1	99	94.959	ENSAMEG00000005993	SRBD1	100	93.023	Ailuropoda_melanoleuca
ENSCAFG00020026284	SRBD1	96	58.243	ENSACIG00000009875	si:ch211-117n7.8	97	50.668	Amphilophus_citrinellus
ENSCAFG00020026284	SRBD1	97	58.065	ENSAOCG00000024718	si:ch211-117n7.8	94	51.290	Amphiprion_ocellaris
ENSCAFG00020026284	SRBD1	97	58.284	ENSAPEG00000002645	si:ch211-117n7.8	99	50.513	Amphiprion_percula
ENSCAFG00020026284	SRBD1	97	58.592	ENSATEG00000010844	si:ch211-117n7.8	84	58.592	Anabas_testudineus
ENSCAFG00020026284	SRBD1	99	78.184	ENSAPLG00000006313	SRBD1	100	68.281	Anas_platyrhynchos
ENSCAFG00020026284	SRBD1	91	70.701	ENSACAG00000003811	-	90	97.222	Anolis_carolinensis
ENSCAFG00020026284	SRBD1	99	89.895	ENSANAG00000025573	SRBD1	100	86.847	Aotus_nancymaae
ENSCAFG00020026284	SRBD1	98	57.311	ENSACLG00000024219	si:ch211-117n7.8	94	50.412	Astatotilapia_calliptera
ENSCAFG00020026284	SRBD1	99	60.681	ENSAMXG00000004294	SRBD1	93	53.575	Astyanax_mexicanus
ENSCAFG00020026284	SRBD1	99	89.907	ENSBTAG00000007508	SRBD1	100	93.671	Bos_taurus
ENSCAFG00020026284	SRBD1	99	89.663	ENSCJAG00000000727	SRBD1	100	86.446	Callithrix_jacchus
ENSCAFG00020026284	SRBD1	99	96.729	ENSCAFG00000002554	SRBD1	100	96.667	Canis_familiaris
ENSCAFG00020026284	SRBD1	99	90.603	ENSCHIG00000016535	SRBD1	98	87.964	Capra_hircus
ENSCAFG00020026284	SRBD1	99	91.088	ENSTSYG00000012797	SRBD1	100	88.176	Carlito_syrichta
ENSCAFG00020026284	SRBD1	92	91.139	ENSCAPG00000014166	-	100	89.441	Cavia_aperea
ENSCAFG00020026284	SRBD1	99	92.482	ENSCPOG00000004773	SRBD1	100	87.210	Cavia_porcellus
ENSCAFG00020026284	SRBD1	99	90.476	ENSCCAG00000025589	SRBD1	100	87.450	Cebus_capucinus
ENSCAFG00020026284	SRBD1	99	90.708	ENSCATG00000039530	SRBD1	100	87.952	Cercocebus_atys
ENSCAFG00020026284	SRBD1	99	92.553	ENSCLAG00000008623	SRBD1	100	87.349	Chinchilla_lanigera
ENSCAFG00020026284	SRBD1	99	90.941	ENSCSAG00000013350	SRBD1	100	88.153	Chlorocebus_sabaeus
ENSCAFG00020026284	SRBD1	91	93.631	ENSCHOG00000003805	SRBD1	83	94.118	Choloepus_hoffmanni
ENSCAFG00020026284	SRBD1	99	79.812	ENSCPBG00000005677	SRBD1	100	71.342	Chrysemys_picta_bellii
ENSCAFG00020026284	SRBD1	91	41.890	ENSCING00000005950	-	99	42.405	Ciona_intestinalis
ENSCAFG00020026284	SRBD1	92	43.282	ENSCSAVG00000000861	-	99	43.282	Ciona_savignyi
ENSCAFG00020026284	SRBD1	99	90.476	ENSCANG00000016307	SRBD1	99	87.827	Colobus_angolensis_palliatus
ENSCAFG00020026284	SRBD1	99	88.772	ENSCGRG00001000513	Srbd1	100	82.430	Cricetulus_griseus_chok1gshd
ENSCAFG00020026284	SRBD1	99	88.772	ENSCGRG00000002283	Srbd1	100	82.430	Cricetulus_griseus_crigri
ENSCAFG00020026284	SRBD1	97	57.587	ENSCSEG00000000856	si:ch211-117n7.8	84	57.706	Cynoglossus_semilaevis
ENSCAFG00020026284	SRBD1	97	58.654	ENSCVAG00000020212	si:ch211-117n7.8	97	51.836	Cyprinodon_variegatus
ENSCAFG00020026284	SRBD1	91	56.688	ENSDARG00000079827	srbd1	99	56.688	Danio_rerio
ENSCAFG00020026284	SRBD1	99	91.098	ENSDNOG00000018686	SRBD1	100	87.888	Dasypus_novemcinctus
ENSCAFG00020026284	SRBD1	99	89.449	ENSDORG00000010468	Srbd1	100	84.739	Dipodomys_ordii
ENSCAFG00020026284	SRBD1	91	37.769	FBgn0051156	CG31156	98	33.233	Drosophila_melanogaster
ENSCAFG00020026284	SRBD1	95	78.049	ENSETEG00000000739	SRBD1	91	81.818	Echinops_telfairi
ENSCAFG00020026284	SRBD1	84	48.481	ENSEBUG00000008902	si:ch211-117n7.8	96	48.481	Eptatretus_burgeri
ENSCAFG00020026284	SRBD1	91	98.438	ENSEASG00005003132	SRBD1	98	94.937	Equus_asinus_asinus
ENSCAFG00020026284	SRBD1	99	92.343	ENSECAG00000013865	SRBD1	99	89.240	Equus_caballus
ENSCAFG00020026284	SRBD1	98	60.000	ENSELUG00000012592	si:ch211-117n7.8	91	53.157	Esox_lucius
ENSCAFG00020026284	SRBD1	99	93.852	ENSFCAG00000005101	SRBD1	100	92.269	Felis_catus
ENSCAFG00020026284	SRBD1	99	76.071	ENSFALG00000012966	SRBD1	100	66.599	Ficedula_albicollis
ENSCAFG00020026284	SRBD1	99	92.399	ENSFDAG00000016670	SRBD1	98	85.358	Fukomys_damarensis
ENSCAFG00020026284	SRBD1	97	58.662	ENSFHEG00000019480	si:ch211-117n7.8	92	50.410	Fundulus_heteroclitus
ENSCAFG00020026284	SRBD1	91	50.955	ENSGMOG00000018010	-	100	54.333	Gadus_morhua
ENSCAFG00020026284	SRBD1	98	77.765	ENSGALG00000009990	SRBD1	100	67.700	Gallus_gallus
ENSCAFG00020026284	SRBD1	97	57.674	ENSGAFG00000019664	si:ch211-117n7.8	84	57.674	Gambusia_affinis
ENSCAFG00020026284	SRBD1	91	53.503	ENSGACG00000010794	si:ch211-117n7.8	100	61.920	Gasterosteus_aculeatus
ENSCAFG00020026284	SRBD1	97	80.552	ENSGAGG00000006166	SRBD1	99	80.552	Gopherus_agassizii
ENSCAFG00020026284	SRBD1	99	90.570	ENSGGOG00000005910	SRBD1	99	87.214	Gorilla_gorilla
ENSCAFG00020026284	SRBD1	98	51.267	ENSHBUG00000013207	si:ch211-117n7.8	86	51.574	Haplochromis_burtoni
ENSCAFG00020026284	SRBD1	99	91.559	ENSHGLG00000018153	-	99	86.419	Heterocephalus_glaber_female
ENSCAFG00020026284	SRBD1	99	92.043	ENSHGLG00100015183	-	99	86.217	Heterocephalus_glaber_male
ENSCAFG00020026284	SRBD1	91	50.955	ENSHCOG00000020901	-	99	51.266	Hippocampus_comes
ENSCAFG00020026284	SRBD1	98	62.156	ENSIPUG00000009661	srbd1	85	62.156	Ictalurus_punctatus
ENSCAFG00020026284	SRBD1	99	92.136	ENSSTOG00000005898	SRBD1	100	88.052	Ictidomys_tridecemlineatus
ENSCAFG00020026284	SRBD1	99	82.573	ENSJJAG00000022244	Srbd1	100	77.756	Jaculus_jaculus
ENSCAFG00020026284	SRBD1	100	56.301	ENSKMAG00000003473	si:ch211-117n7.8	97	49.550	Kryptolebias_marmoratus
ENSCAFG00020026284	SRBD1	97	58.223	ENSLBEG00000027518	si:ch211-117n7.8	97	49.055	Labrus_bergylta
ENSCAFG00020026284	SRBD1	98	70.296	ENSLACG00000009790	SRBD1	100	70.296	Latimeria_chalumnae
ENSCAFG00020026284	SRBD1	98	63.550	ENSLOCG00000016360	si:ch211-117n7.8	99	54.769	Lepisosteus_oculatus
ENSCAFG00020026284	SRBD1	91	91.720	ENSLAFG00000004190	-	97	88.603	Loxodonta_africana
ENSCAFG00020026284	SRBD1	99	90.941	ENSMFAG00000042026	SRBD1	100	88.253	Macaca_fascicularis
ENSCAFG00020026284	SRBD1	99	90.941	ENSMMUG00000003490	SRBD1	100	88.052	Macaca_mulatta
ENSCAFG00020026284	SRBD1	99	88.386	ENSMNEG00000034701	SRBD1	100	86.606	Macaca_nemestrina
ENSCAFG00020026284	SRBD1	99	90.592	ENSMLEG00000000745	SRBD1	100	87.851	Mandrillus_leucophaeus
ENSCAFG00020026284	SRBD1	95	57.143	ENSMAMG00000021921	si:ch211-117n7.8	97	48.473	Mastacembelus_armatus
ENSCAFG00020026284	SRBD1	98	57.311	ENSMZEG00005027369	si:ch211-117n7.8	94	50.412	Maylandia_zebra
ENSCAFG00020026284	SRBD1	99	71.930	ENSMGAG00000010273	SRBD1	100	74.561	Meleagris_gallopavo
ENSCAFG00020026284	SRBD1	93	86.875	ENSMAUG00000013916	Srbd1	99	83.713	Mesocricetus_auratus
ENSCAFG00020026284	SRBD1	99	91.986	ENSMICG00000007835	SRBD1	100	88.956	Microcebus_murinus
ENSCAFG00020026284	SRBD1	99	87.368	ENSMOCG00000018716	Srbd1	100	81.426	Microtus_ochrogaster
ENSCAFG00020026284	SRBD1	97	57.641	ENSMMOG00000007507	si:ch211-117n7.8	87	57.641	Mola_mola
ENSCAFG00020026284	SRBD1	95	57.683	ENSMALG00000001562	si:ch211-117n7.8	83	57.637	Monopterus_albus
ENSCAFG00020026284	SRBD1	99	86.651	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.026	Mus_caroli
ENSCAFG00020026284	SRBD1	99	86.534	ENSMUSG00000024135	Srbd1	99	82.653	Mus_musculus
ENSCAFG00020026284	SRBD1	99	85.246	MGP_PahariEiJ_G0020924	Srbd1	100	78.614	Mus_pahari
ENSCAFG00020026284	SRBD1	99	86.768	MGP_SPRETEiJ_G0022850	Srbd1	100	80.020	Mus_spretus
ENSCAFG00020026284	SRBD1	99	87.935	ENSMLUG00000007039	SRBD1	100	85.542	Myotis_lucifugus
ENSCAFG00020026284	SRBD1	99	86.636	ENSNGAG00000011893	Srbd1	100	81.329	Nannospalax_galili
ENSCAFG00020026284	SRBD1	97	56.611	ENSNBRG00000012873	si:ch211-117n7.8	85	56.936	Neolamprologus_brichardi
ENSCAFG00020026284	SRBD1	99	90.360	ENSNLEG00000016877	SRBD1	100	87.349	Nomascus_leucogenys
ENSCAFG00020026284	SRBD1	99	90.071	ENSODEG00000012095	SRBD1	100	83.384	Octodon_degus
ENSCAFG00020026284	SRBD1	97	57.623	ENSONIG00000000945	si:ch211-117n7.8	100	58.463	Oreochromis_niloticus
ENSCAFG00020026284	SRBD1	99	93.499	ENSOCUG00000015385	SRBD1	100	88.956	Oryctolagus_cuniculus
ENSCAFG00020026284	SRBD1	98	54.502	ENSORLG00000004427	si:ch211-117n7.8	82	54.502	Oryzias_latipes
ENSCAFG00020026284	SRBD1	98	57.160	ENSORLG00020012792	si:ch211-117n7.8	83	57.396	Oryzias_latipes_hni
ENSCAFG00020026284	SRBD1	98	57.060	ENSORLG00015018598	si:ch211-117n7.8	84	57.060	Oryzias_latipes_hsok
ENSCAFG00020026284	SRBD1	98	56.190	ENSOMEG00000012229	si:ch211-117n7.8	96	52.650	Oryzias_melastigma
ENSCAFG00020026284	SRBD1	97	85.902	ENSOGAG00000001076	SRBD1	100	82.229	Otolemur_garnettii
ENSCAFG00020026284	SRBD1	91	94.268	ENSOARG00000005958	SRBD1	100	83.802	Ovis_aries
ENSCAFG00020026284	SRBD1	99	90.360	ENSPPAG00000038442	SRBD1	100	87.349	Pan_paniscus
ENSCAFG00020026284	SRBD1	99	93.961	ENSPPRG00000003449	SRBD1	100	92.169	Panthera_pardus
ENSCAFG00020026284	SRBD1	99	93.961	ENSPTIG00000012495	SRBD1	100	92.169	Panthera_tigris_altaica
ENSCAFG00020026284	SRBD1	99	90.360	ENSPTRG00000011889	SRBD1	100	87.349	Pan_troglodytes
ENSCAFG00020026284	SRBD1	99	90.708	ENSPANG00000008063	SRBD1	100	87.851	Papio_anubis
ENSCAFG00020026284	SRBD1	99	60.071	ENSPKIG00000021973	si:ch211-117n7.8	97	51.731	Paramormyrops_kingsleyae
ENSCAFG00020026284	SRBD1	98	79.953	ENSPSIG00000008992	SRBD1	100	71.013	Pelodiscus_sinensis
ENSCAFG00020026284	SRBD1	97	56.340	ENSPMGG00000013348	si:ch211-117n7.8	98	48.721	Periophthalmus_magnuspinnatus
ENSCAFG00020026284	SRBD1	99	86.073	ENSPEMG00000020684	Srbd1	100	80.569	Peromyscus_maniculatus_bairdii
ENSCAFG00020026284	SRBD1	99	57.746	ENSPFOG00000010650	si:ch211-117n7.8	93	51.295	Poecilia_formosa
ENSCAFG00020026284	SRBD1	97	58.273	ENSPLAG00000002141	si:ch211-117n7.8	83	58.273	Poecilia_latipinna
ENSCAFG00020026284	SRBD1	99	57.864	ENSPMEG00000018537	si:ch211-117n7.8	93	51.503	Poecilia_mexicana
ENSCAFG00020026284	SRBD1	98	57.565	ENSPREG00000003258	si:ch211-117n7.8	86	57.565	Poecilia_reticulata
ENSCAFG00020026284	SRBD1	98	89.071	ENSPPYG00000012444	SRBD1	94	89.071	Pongo_abelii
ENSCAFG00020026284	SRBD1	88	83.042	ENSPCAG00000005629	SRBD1	85	82.119	Procavia_capensis
ENSCAFG00020026284	SRBD1	91	95.541	ENSPCOG00000017669	SRBD1	100	76.353	Propithecus_coquereli
ENSCAFG00020026284	SRBD1	91	92.994	ENSPVAG00000001782	SRBD1	100	79.317	Pteropus_vampyrus
ENSCAFG00020026284	SRBD1	98	54.862	ENSPNYG00000000508	si:ch211-117n7.8	86	55.181	Pundamilia_nyererei
ENSCAFG00020026284	SRBD1	98	62.053	ENSPNAG00000013492	SRBD1	86	61.933	Pygocentrus_nattereri
ENSCAFG00020026284	SRBD1	99	85.463	ENSRNOG00000014720	Srbd1	100	78.979	Rattus_norvegicus
ENSCAFG00020026284	SRBD1	99	90.244	ENSRBIG00000033486	SRBD1	99	87.525	Rhinopithecus_bieti
ENSCAFG00020026284	SRBD1	99	90.244	ENSRROG00000041599	SRBD1	99	87.525	Rhinopithecus_roxellana
ENSCAFG00020026284	SRBD1	99	89.895	ENSSBOG00000024982	SRBD1	100	86.847	Saimiri_boliviensis_boliviensis
ENSCAFG00020026284	SRBD1	97	61.165	ENSSFOG00015001128	si:ch211-117n7.8	90	61.165	Scleropages_formosus
ENSCAFG00020026284	SRBD1	97	58.493	ENSSMAG00000018256	si:ch211-117n7.8	82	58.612	Scophthalmus_maximus
ENSCAFG00020026284	SRBD1	100	57.358	ENSSLDG00000023189	si:ch211-117n7.8	96	50.152	Seriola_lalandi_dorsalis
ENSCAFG00020026284	SRBD1	91	89.809	ENSSARG00000009740	SRBD1	100	76.104	Sorex_araneus
ENSCAFG00020026284	SRBD1	99	78.835	ENSSPUG00000010475	SRBD1	94	78.835	Sphenodon_punctatus
ENSCAFG00020026284	SRBD1	99	55.334	ENSSPAG00000008092	-	84	56.407	Stegastes_partitus
ENSCAFG00020026284	SRBD1	91	56.051	ENSSPAG00000014206	-	99	54.950	Stegastes_partitus
ENSCAFG00020026284	SRBD1	99	93.042	ENSSSCG00000008445	SRBD1	99	88.450	Sus_scrofa
ENSCAFG00020026284	SRBD1	97	76.747	ENSTGUG00000003878	SRBD1	100	76.747	Taeniopygia_guttata
ENSCAFG00020026284	SRBD1	98	57.907	ENSTRUG00000007080	si:ch211-117n7.8	93	58.026	Takifugu_rubripes
ENSCAFG00020026284	SRBD1	100	55.149	ENSTNIG00000007464	si:ch211-117n7.8	97	48.234	Tetraodon_nigroviridis
ENSCAFG00020026284	SRBD1	77	100.000	ENSTBEG00000004556	SRBD1	76	100.000	Tupaia_belangeri
ENSCAFG00020026284	SRBD1	98	93.088	ENSTTRG00000011871	SRBD1	94	93.088	Tursiops_truncatus
ENSCAFG00020026284	SRBD1	99	94.620	ENSUAMG00000008126	SRBD1	97	96.751	Ursus_americanus
ENSCAFG00020026284	SRBD1	99	94.737	ENSUMAG00000012902	SRBD1	98	92.929	Ursus_maritimus
ENSCAFG00020026284	SRBD1	99	91.521	ENSVPAG00000006825	SRBD1	100	88.987	Vicugna_pacos
ENSCAFG00020026284	SRBD1	99	96.842	ENSVVUG00000005389	SRBD1	100	100.000	Vulpes_vulpes
ENSCAFG00020026284	SRBD1	99	60.000	ENSXETG00000002760	srbd1	100	50.048	Xenopus_tropicalis
ENSCAFG00020026284	SRBD1	99	57.277	ENSXMAG00000016861	si:ch211-117n7.8	85	57.277	Xiphophorus_maculatus