EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020026577 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 537 bases
Position: chrQKWQ01001938.1:47946996-47947532
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020034267	zf-U1	PF06220.12	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020039560	-	537	-	ENSCAFP00020034267	178 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020026577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020026577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020026577	-	100	73.034	ENSCAFG00020024178	-	86	68.539
ENSCAFG00020026577	-	100	80.899	ENSCAFG00020017383	-	100	74.719
ENSCAFG00020026577	-	90	70.186	ENSCAFG00020001897	-	93	61.272
ENSCAFG00020026577	-	100	84.831	ENSCAFG00020005945	-	100	78.652
ENSCAFG00020026577	-	99	75.000	ENSCAFG00020009944	-	90	75.568
ENSCAFG00020026577	-	100	81.461	ENSCAFG00020005758	-	99	75.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020026577	-	100	84.831	ENSG00000124562	SNRPC	100	80.292	Homo_sapiens
ENSCAFG00020026577	-	100	83.146	ENSAMEG00000000963	SNRPC	87	77.841	Ailuropoda_melanoleuca
ENSCAFG00020026577	-	100	81.461	ENSACAG00000015721	SNRPC	87	76.136	Anolis_carolinensis
ENSCAFG00020026577	-	100	67.416	ENSANAG00000021444	-	61	82.292	Aotus_nancymaae
ENSCAFG00020026577	-	99	81.921	ENSANAG00000020588	-	92	71.429	Aotus_nancymaae
ENSCAFG00020026577	-	100	74.719	ENSANAG00000019726	-	92	76.966	Aotus_nancymaae
ENSCAFG00020026577	-	100	84.270	ENSANAG00000007843	-	100	78.090	Aotus_nancymaae
ENSCAFG00020026577	-	100	74.719	ENSANAG00000021026	-	92	77.528	Aotus_nancymaae
ENSCAFG00020026577	-	100	73.034	ENSANAG00000019157	-	100	74.719	Aotus_nancymaae
ENSCAFG00020026577	-	100	84.831	ENSANAG00000019696	-	100	78.652	Aotus_nancymaae
ENSCAFG00020026577	-	100	56.742	ENSAMXG00000032641	snrpc	87	63.483	Astyanax_mexicanus
ENSCAFG00020026577	-	100	99.438	ENSBTAG00000024549	SNRPC	100	99.438	Bos_taurus
ENSCAFG00020026577	-	100	83.708	ENSCJAG00000043055	-	100	77.528	Callithrix_jacchus
ENSCAFG00020026577	-	100	84.831	ENSCJAG00000015321	-	100	78.652	Callithrix_jacchus
ENSCAFG00020026577	-	100	82.584	ENSCJAG00000041822	-	100	76.404	Callithrix_jacchus
ENSCAFG00020026577	-	100	88.764	ENSCAFG00000028988	-	100	88.764	Canis_familiaris
ENSCAFG00020026577	-	100	80.899	ENSCAFG00000031775	-	100	74.719	Canis_familiaris
ENSCAFG00020026577	-	66	99.153	ENSCAFG00000001231	-	93	99.153	Canis_familiaris
ENSCAFG00020026577	-	100	60.112	ENSCAFG00000025525	-	100	58.989	Canis_familiaris
ENSCAFG00020026577	-	100	84.270	ENSCHIG00000012087	-	100	78.090	Capra_hircus
ENSCAFG00020026577	-	100	65.169	ENSCHIG00000005039	-	100	56.522	Capra_hircus
ENSCAFG00020026577	-	100	62.360	ENSTSYG00000025721	-	100	57.865	Carlito_syrichta
ENSCAFG00020026577	-	100	84.831	ENSTSYG00000011216	-	100	78.652	Carlito_syrichta
ENSCAFG00020026577	-	98	76.000	ENSTSYG00000029745	-	50	93.000	Carlito_syrichta
ENSCAFG00020026577	-	90	83.230	ENSCAPG00000005161	SNRPC	100	83.230	Cavia_aperea
ENSCAFG00020026577	-	100	84.831	ENSCPOG00000008563	SNRPC	100	78.652	Cavia_porcellus
ENSCAFG00020026577	-	98	66.857	ENSCCAG00000022209	-	95	60.571	Cebus_capucinus
ENSCAFG00020026577	-	100	80.337	ENSCCAG00000036059	-	89	80.337	Cebus_capucinus
ENSCAFG00020026577	-	98	81.143	ENSCCAG00000022751	-	95	76.000	Cebus_capucinus
ENSCAFG00020026577	-	100	62.360	ENSCCAG00000028293	-	100	60.112	Cebus_capucinus
ENSCAFG00020026577	-	100	84.831	ENSCATG00000035787	SNRPC	100	78.652	Cercocebus_atys
ENSCAFG00020026577	-	99	72.159	ENSCLAG00000010242	-	58	83.158	Chinchilla_lanigera
ENSCAFG00020026577	-	100	84.831	ENSCLAG00000016920	SNRPC	100	78.652	Chinchilla_lanigera
ENSCAFG00020026577	-	100	99.438	ENSCSAG00000009821	SNRPC	100	99.438	Chlorocebus_sabaeus
ENSCAFG00020026577	-	100	68.539	ENSCHOG00000011439	SNRPC	88	63.068	Choloepus_hoffmanni
ENSCAFG00020026577	-	100	82.584	ENSCPBG00000027142	SNRPC	100	76.404	Chrysemys_picta_bellii
ENSCAFG00020026577	-	100	84.831	ENSCANG00000028035	SNRPC	100	78.652	Colobus_angolensis_palliatus
ENSCAFG00020026577	-	100	73.596	ENSCGRG00001021483	-	100	65.730	Cricetulus_griseus_chok1gshd
ENSCAFG00020026577	-	100	84.270	ENSCGRG00001009011	-	100	78.090	Cricetulus_griseus_chok1gshd
ENSCAFG00020026577	-	100	82.584	ENSCGRG00000005005	Snrpc	99	77.273	Cricetulus_griseus_crigri
ENSCAFG00020026577	-	67	99.160	ENSDNOG00000042403	-	94	99.160	Dasypus_novemcinctus
ENSCAFG00020026577	-	100	84.270	ENSDNOG00000034699	-	99	78.090	Dasypus_novemcinctus
ENSCAFG00020026577	-	100	98.315	ENSEASG00005021007	SNRPC	100	98.315	Equus_asinus_asinus
ENSCAFG00020026577	-	100	98.315	ENSECAG00000026848	SNRPC	100	98.315	Equus_caballus
ENSCAFG00020026577	-	99	67.232	ENSEEUG00000014633	SNRPC	90	61.017	Erinaceus_europaeus
ENSCAFG00020026577	-	100	84.831	ENSFCAG00000044077	-	100	78.652	Felis_catus
ENSCAFG00020026577	-	54	97.917	ENSFCAG00000031775	-	56	97.917	Felis_catus
ENSCAFG00020026577	-	100	83.708	ENSFALG00000003756	SNRPC	100	77.528	Ficedula_albicollis
ENSCAFG00020026577	-	100	84.831	ENSFDAG00000018111	SNRPC	100	78.652	Fukomys_damarensis
ENSCAFG00020026577	-	100	82.682	ENSGALG00000002773	SNRPC	100	76.536	Gallus_gallus
ENSCAFG00020026577	-	100	82.584	ENSGAGG00000003063	SNRPC	100	76.404	Gopherus_agassizii
ENSCAFG00020026577	-	100	84.831	ENSGGOG00000012499	SNRPC	100	78.652	Gorilla_gorilla
ENSCAFG00020026577	-	100	84.831	ENSHGLG00000013981	SNRPC	100	78.652	Heterocephalus_glaber_female
ENSCAFG00020026577	-	63	80.357	ENSHGLG00000005871	-	54	87.013	Heterocephalus_glaber_female
ENSCAFG00020026577	-	100	73.596	ENSHGLG00100017764	-	100	75.281	Heterocephalus_glaber_male
ENSCAFG00020026577	-	100	84.831	ENSHGLG00100009478	SNRPC	100	78.652	Heterocephalus_glaber_male
ENSCAFG00020026577	-	53	86.170	ENSIPUG00000024851	snrpc	100	63.483	Ictalurus_punctatus
ENSCAFG00020026577	-	100	84.831	ENSSTOG00000013786	SNRPC	100	78.652	Ictidomys_tridecemlineatus
ENSCAFG00020026577	-	100	84.270	ENSJJAG00000021741	Snrpc	100	78.090	Jaculus_jaculus
ENSCAFG00020026577	-	100	84.831	ENSLAFG00000013534	SNRPC	100	78.652	Loxodonta_africana
ENSCAFG00020026577	-	100	84.270	ENSMFAG00000030525	-	100	78.090	Macaca_fascicularis
ENSCAFG00020026577	-	100	84.831	ENSMFAG00000031764	-	100	78.652	Macaca_fascicularis
ENSCAFG00020026577	-	100	83.708	ENSMMUG00000000869	-	100	77.528	Macaca_mulatta
ENSCAFG00020026577	-	100	83.708	ENSMMUG00000039415	-	100	77.528	Macaca_mulatta
ENSCAFG00020026577	-	100	76.404	ENSMMUG00000045425	-	100	70.787	Macaca_mulatta
ENSCAFG00020026577	-	100	84.831	ENSMNEG00000032731	SNRPC	100	78.652	Macaca_nemestrina
ENSCAFG00020026577	-	98	80.460	ENSMLEG00000040224	-	89	71.839	Mandrillus_leucophaeus
ENSCAFG00020026577	-	100	84.831	ENSMLEG00000033916	-	100	78.652	Mandrillus_leucophaeus
ENSCAFG00020026577	-	100	86.517	ENSMGAG00000006054	SNRPC	100	86.517	Meleagris_gallopavo
ENSCAFG00020026577	-	100	73.596	ENSMICG00000036552	-	87	71.429	Microcebus_murinus
ENSCAFG00020026577	-	100	84.270	ENSMICG00000032183	-	100	78.090	Microcebus_murinus
ENSCAFG00020026577	-	100	81.461	ENSMICG00000007339	-	100	78.090	Microcebus_murinus
ENSCAFG00020026577	-	100	84.270	ENSMOCG00000017609	Snrpc	100	78.090	Microtus_ochrogaster
ENSCAFG00020026577	-	100	84.270	ENSMODG00000013904	-	100	78.090	Monodelphis_domestica
ENSCAFG00020026577	-	100	84.270	MGP_CAROLIEiJ_G0021308	Snrpc	100	78.090	Mus_caroli
ENSCAFG00020026577	-	100	84.270	ENSMUSG00000024217	Snrpc	100	78.090	Mus_musculus
ENSCAFG00020026577	-	66	98.305	MGP_SPRETEiJ_G0022221	-	98	98.305	Mus_spretus
ENSCAFG00020026577	-	100	83.146	ENSMPUG00000003210	SNRPC	99	77.841	Mustela_putorius_furo
ENSCAFG00020026577	-	100	83.146	ENSMLUG00000002488	SNRPC	99	77.841	Myotis_lucifugus
ENSCAFG00020026577	-	100	84.270	ENSNGAG00000019686	Snrpc	100	78.090	Nannospalax_galili
ENSCAFG00020026577	-	100	84.831	ENSNLEG00000034810	SNRPC	100	78.652	Nomascus_leucogenys
ENSCAFG00020026577	-	90	83.230	ENSMEUG00000009300	SNRPC	100	83.230	Notamacropus_eugenii
ENSCAFG00020026577	-	100	84.831	ENSODEG00000018985	-	100	78.652	Octodon_degus
ENSCAFG00020026577	-	100	84.270	ENSODEG00000020201	-	100	78.090	Octodon_degus
ENSCAFG00020026577	-	54	92.784	ENSODEG00000006008	-	69	93.750	Octodon_degus
ENSCAFG00020026577	-	100	84.831	ENSODEG00000017080	-	100	78.652	Octodon_degus
ENSCAFG00020026577	-	100	84.831	ENSODEG00000020370	-	100	78.652	Octodon_degus
ENSCAFG00020026577	-	100	83.708	ENSODEG00000019633	-	100	77.528	Octodon_degus
ENSCAFG00020026577	-	90	81.212	ENSOANG00000003405	SNRPC	99	81.212	Ornithorhynchus_anatinus
ENSCAFG00020026577	-	100	83.708	ENSOCUG00000026430	-	99	77.528	Oryctolagus_cuniculus
ENSCAFG00020026577	-	54	96.875	ENSOCUG00000023292	-	100	76.404	Oryctolagus_cuniculus
ENSCAFG00020026577	-	100	84.831	ENSOCUG00000026668	-	100	78.652	Oryctolagus_cuniculus
ENSCAFG00020026577	-	98	84.483	ENSOGAG00000008755	-	88	77.841	Otolemur_garnettii
ENSCAFG00020026577	-	97	74.566	ENSOGAG00000028405	-	99	72.254	Otolemur_garnettii
ENSCAFG00020026577	-	100	87.079	ENSOGAG00000026269	-	100	77.528	Otolemur_garnettii
ENSCAFG00020026577	-	100	84.831	ENSOARG00000010823	SNRPC	100	78.652	Ovis_aries
ENSCAFG00020026577	-	100	84.831	ENSPPAG00000043871	SNRPC	100	78.652	Pan_paniscus
ENSCAFG00020026577	-	100	84.831	ENSPPRG00000008647	-	100	78.652	Panthera_pardus
ENSCAFG00020026577	-	90	68.293	ENSPTIG00000011880	-	81	49.091	Panthera_tigris_altaica
ENSCAFG00020026577	-	100	84.831	ENSPTIG00000021867	-	100	78.652	Panthera_tigris_altaica
ENSCAFG00020026577	-	100	84.831	ENSPTRG00000018070	SNRPC	100	78.652	Pan_troglodytes
ENSCAFG00020026577	-	100	84.831	ENSPANG00000022802	-	100	78.652	Papio_anubis
ENSCAFG00020026577	-	100	66.854	ENSPANG00000018228	-	94	69.663	Papio_anubis
ENSCAFG00020026577	-	99	81.818	ENSPSIG00000004876	SNRPC	77	81.818	Pelodiscus_sinensis
ENSCAFG00020026577	-	100	77.528	ENSPEMG00000002763	-	100	71.348	Peromyscus_maniculatus_bairdii
ENSCAFG00020026577	-	100	84.270	ENSPEMG00000010773	Snrpc	100	78.090	Peromyscus_maniculatus_bairdii
ENSCAFG00020026577	-	100	83.146	ENSPCAG00000016885	SNRPC	90	77.841	Procavia_capensis
ENSCAFG00020026577	-	100	84.831	ENSPCOG00000004904	SNRPC	100	78.652	Propithecus_coquereli
ENSCAFG00020026577	-	100	82.584	ENSPVAG00000015597	SNRPC	87	77.273	Pteropus_vampyrus
ENSCAFG00020026577	-	100	84.270	ENSRNOG00000000493	Snrpc	100	78.090	Rattus_norvegicus
ENSCAFG00020026577	-	100	84.831	ENSRBIG00000037567	-	100	78.652	Rhinopithecus_bieti
ENSCAFG00020026577	-	100	84.270	ENSRBIG00000022998	-	100	84.270	Rhinopithecus_bieti
ENSCAFG00020026577	-	100	84.270	ENSRBIG00000014819	-	100	78.090	Rhinopithecus_bieti
ENSCAFG00020026577	-	100	84.831	ENSRROG00000041300	SNRPC	100	78.652	Rhinopithecus_roxellana
ENSCAFG00020026577	-	100	84.831	ENSSBOG00000031528	-	100	78.652	Saimiri_boliviensis_boliviensis
ENSCAFG00020026577	-	96	72.941	ENSSBOG00000032361	-	66	80.208	Saimiri_boliviensis_boliviensis
ENSCAFG00020026577	-	98	73.714	ENSSBOG00000023189	-	58	86.458	Saimiri_boliviensis_boliviensis
ENSCAFG00020026577	-	99	84.091	ENSSHAG00000000945	-	87	77.841	Sarcophilus_harrisii
ENSCAFG00020026577	-	100	83.708	ENSSPUG00000002502	SNRPC	100	77.528	Sphenodon_punctatus
ENSCAFG00020026577	-	100	99.438	ENSSSCG00000001531	SNRPC	100	99.438	Sus_scrofa
ENSCAFG00020026577	-	100	82.584	ENSTGUG00000001773	SNRPC	99	76.836	Taeniopygia_guttata
ENSCAFG00020026577	-	98	77.714	ENSTBEG00000013022	-	62	91.667	Tupaia_belangeri
ENSCAFG00020026577	-	54	90.625	ENSTBEG00000015356	-	68	90.625	Tupaia_belangeri
ENSCAFG00020026577	-	100	83.146	ENSTTRG00000007827	SNRPC	86	77.841	Tursiops_truncatus
ENSCAFG00020026577	-	78	97.101	ENSUAMG00000014125	SNRPC	93	97.101	Ursus_americanus
ENSCAFG00020026577	-	100	98.315	ENSUMAG00000010869	SNRPC	100	98.315	Ursus_maritimus
ENSCAFG00020026577	-	97	83.815	ENSVVUG00000010467	-	87	79.429	Vulpes_vulpes
ENSCAFG00020026577	-	100	83.708	ENSVVUG00000021947	-	100	77.528	Vulpes_vulpes