EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020027112 (Gene tree)
Gene ID: 112652111
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 39056 bases
Position: chrQKWQ01000010.1:4507494-4546549
Accession: 30626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020034993	YTH	PF04146.15	3.2e-40	1	1
ENSCAFP00020034991	YTH	PF04146.15	3.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020040392	YTHDC1-202	2829	-	ENSCAFP00020034993	730 (aa)	-	UPI000184A202
ENSCAFT00020040390	YTHDC1-201	2856	-	ENSCAFP00020034991	739 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020027112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020027112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020027112	YTHDC1	100	97.401	ENSG00000083896	YTHDC1	100	97.401	Homo_sapiens
ENSCAFG00020027112	YTHDC1	57	60.241	ENSAPOG00000013997	ythdc1	57	63.221	Acanthochromis_polyacanthus
ENSCAFG00020027112	YTHDC1	100	99.589	ENSAMEG00000005688	YTHDC1	100	99.589	Ailuropoda_melanoleuca
ENSCAFG00020027112	YTHDC1	82	54.200	ENSACIG00000019728	ythdc1	80	60.048	Amphilophus_citrinellus
ENSCAFG00020027112	YTHDC1	57	61.927	ENSAOCG00000000239	ythdc1	59	66.970	Amphiprion_ocellaris
ENSCAFG00020027112	YTHDC1	50	62.331	ENSAPEG00000000618	ythdc1	53	68.280	Amphiprion_percula
ENSCAFG00020027112	YTHDC1	91	84.708	ENSAPLG00000009921	YTHDC1	60	96.897	Anas_platyrhynchos
ENSCAFG00020027112	YTHDC1	93	84.047	ENSACAG00000009697	YTHDC1	93	83.604	Anolis_carolinensis
ENSCAFG00020027112	YTHDC1	100	97.538	ENSANAG00000001522	YTHDC1	100	97.538	Aotus_nancymaae
ENSCAFG00020027112	YTHDC1	57	60.780	ENSACLG00000019371	ythdc1	59	66.133	Astatotilapia_calliptera
ENSCAFG00020027112	YTHDC1	93	64.080	ENSAMXG00000006978	ythdc1	58	79.814	Astyanax_mexicanus
ENSCAFG00020027112	YTHDC1	100	97.671	ENSBTAG00000015572	YTHDC1	100	97.671	Bos_taurus
ENSCAFG00020027112	YTHDC1	100	97.811	ENSCJAG00000009934	YTHDC1	100	97.811	Callithrix_jacchus
ENSCAFG00020027112	YTHDC1	100	100.000	ENSCAFG00000002821	YTHDC1	100	100.000	Canis_familiaris
ENSCAFG00020027112	YTHDC1	91	86.222	ENSCHIG00000004810	YTHDC1	95	91.667	Capra_hircus
ENSCAFG00020027112	YTHDC1	100	97.538	ENSTSYG00000011668	YTHDC1	100	97.538	Carlito_syrichta
ENSCAFG00020027112	YTHDC1	82	77.838	ENSCAPG00000008722	YTHDC1	90	67.216	Cavia_aperea
ENSCAFG00020027112	YTHDC1	100	90.014	ENSCPOG00000010929	YTHDC1	100	90.014	Cavia_porcellus
ENSCAFG00020027112	YTHDC1	100	97.538	ENSCCAG00000035754	YTHDC1	100	97.538	Cebus_capucinus
ENSCAFG00020027112	YTHDC1	100	96.482	ENSCATG00000036320	YTHDC1	100	96.482	Cercocebus_atys
ENSCAFG00020027112	YTHDC1	91	92.878	ENSCLAG00000005482	YTHDC1	92	92.582	Chinchilla_lanigera
ENSCAFG00020027112	YTHDC1	100	97.538	ENSCSAG00000005252	YTHDC1	100	97.538	Chlorocebus_sabaeus
ENSCAFG00020027112	YTHDC1	92	86.202	ENSCPBG00000021965	YTHDC1	92	82.273	Chrysemys_picta_bellii
ENSCAFG00020027112	YTHDC1	100	97.674	ENSCANG00000004769	YTHDC1	100	97.674	Colobus_angolensis_palliatus
ENSCAFG00020027112	YTHDC1	100	93.297	ENSCGRG00001000816	Ythdc1	100	93.297	Cricetulus_griseus_chok1gshd
ENSCAFG00020027112	YTHDC1	99	95.706	ENSCGRG00000009807	Ythdc1	99	95.706	Cricetulus_griseus_crigri
ENSCAFG00020027112	YTHDC1	57	60.793	ENSCSEG00000020404	ythdc1	59	65.982	Cynoglossus_semilaevis
ENSCAFG00020027112	YTHDC1	57	60.089	ENSCVAG00000022349	ythdc1	59	66.055	Cyprinodon_variegatus
ENSCAFG00020027112	YTHDC1	93	63.663	ENSDARG00000051953	ythdc1	58	78.588	Danio_rerio
ENSCAFG00020027112	YTHDC1	100	95.902	ENSDNOG00000004949	YTHDC1	100	95.902	Dasypus_novemcinctus
ENSCAFG00020027112	YTHDC1	99	96.944	ENSDORG00000013045	Ythdc1	100	96.944	Dipodomys_ordii
ENSCAFG00020027112	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSCAFG00020027112	YTHDC1	100	99.315	ENSEASG00005018383	YTHDC1	100	99.315	Equus_asinus_asinus
ENSCAFG00020027112	YTHDC1	100	99.315	ENSECAG00000018303	YTHDC1	100	99.315	Equus_caballus
ENSCAFG00020027112	YTHDC1	100	96.301	ENSEEUG00000015466	YTHDC1	100	96.301	Erinaceus_europaeus
ENSCAFG00020027112	YTHDC1	93	62.006	ENSELUG00000014029	ythdc1	57	76.716	Esox_lucius
ENSCAFG00020027112	YTHDC1	100	99.315	ENSFCAG00000026791	YTHDC1	100	99.315	Felis_catus
ENSCAFG00020027112	YTHDC1	68	89.679	ENSFALG00000006581	YTHDC1	87	97.449	Ficedula_albicollis
ENSCAFG00020027112	YTHDC1	99	96.394	ENSFDAG00000018560	YTHDC1	100	96.394	Fukomys_damarensis
ENSCAFG00020027112	YTHDC1	65	58.730	ENSFHEG00000001286	ythdc1	60	55.422	Fundulus_heteroclitus
ENSCAFG00020027112	YTHDC1	63	64.539	ENSGMOG00000018815	ythdc1	78	62.989	Gadus_morhua
ENSCAFG00020027112	YTHDC1	92	85.587	ENSGALG00000035906	YTHDC1	56	96.659	Gallus_gallus
ENSCAFG00020027112	YTHDC1	55	64.194	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSCAFG00020027112	YTHDC1	57	63.084	ENSGACG00000015486	ythdc1	57	62.500	Gasterosteus_aculeatus
ENSCAFG00020027112	YTHDC1	93	85.109	ENSGAGG00000007108	YTHDC1	92	81.487	Gopherus_agassizii
ENSCAFG00020027112	YTHDC1	100	96.482	ENSGGOG00000021958	YTHDC1	100	96.482	Gorilla_gorilla
ENSCAFG00020027112	YTHDC1	57	60.092	ENSHBUG00000019288	ythdc1	59	66.133	Haplochromis_burtoni
ENSCAFG00020027112	YTHDC1	100	95.129	ENSHGLG00000006319	-	100	95.129	Heterocephalus_glaber_female
ENSCAFG00020027112	YTHDC1	94	69.622	ENSHGLG00000003239	-	57	77.751	Heterocephalus_glaber_female
ENSCAFG00020027112	YTHDC1	100	95.238	ENSHGLG00100001556	-	100	95.238	Heterocephalus_glaber_male
ENSCAFG00020027112	YTHDC1	94	68.741	ENSHGLG00100008060	-	57	75.297	Heterocephalus_glaber_male
ENSCAFG00020027112	YTHDC1	55	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSCAFG00020027112	YTHDC1	93	67.536	ENSIPUG00000018136	ythdc1	61	84.223	Ictalurus_punctatus
ENSCAFG00020027112	YTHDC1	100	96.482	ENSSTOG00000013652	YTHDC1	100	96.482	Ictidomys_tridecemlineatus
ENSCAFG00020027112	YTHDC1	91	89.778	ENSJJAG00000010268	Ythdc1	93	90.222	Jaculus_jaculus
ENSCAFG00020027112	YTHDC1	57	60.731	ENSKMAG00000006483	ythdc1	85	65.525	Kryptolebias_marmoratus
ENSCAFG00020027112	YTHDC1	64	61.995	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSCAFG00020027112	YTHDC1	87	74.491	ENSLACG00000004893	YTHDC1	92	75.078	Latimeria_chalumnae
ENSCAFG00020027112	YTHDC1	93	73.049	ENSLOCG00000003045	ythdc1	92	89.183	Lepisosteus_oculatus
ENSCAFG00020027112	YTHDC1	100	95.129	ENSLAFG00000021592	YTHDC1	100	96.919	Loxodonta_africana
ENSCAFG00020027112	YTHDC1	100	96.617	ENSMFAG00000031927	YTHDC1	100	96.617	Macaca_fascicularis
ENSCAFG00020027112	YTHDC1	100	97.674	ENSMMUG00000002265	YTHDC1	100	97.674	Macaca_mulatta
ENSCAFG00020027112	YTHDC1	100	97.674	ENSMNEG00000033751	YTHDC1	100	97.674	Macaca_nemestrina
ENSCAFG00020027112	YTHDC1	100	97.538	ENSMLEG00000042147	YTHDC1	100	97.538	Mandrillus_leucophaeus
ENSCAFG00020027112	YTHDC1	57	58.559	ENSMAMG00000013122	ythdc1	58	66.136	Mastacembelus_armatus
ENSCAFG00020027112	YTHDC1	57	60.092	ENSMZEG00005023173	ythdc1	59	66.133	Maylandia_zebra
ENSCAFG00020027112	YTHDC1	93	84.343	ENSMGAG00000010391	YTHDC1	59	96.659	Meleagris_gallopavo
ENSCAFG00020027112	YTHDC1	100	93.023	ENSMAUG00000001286	Ythdc1	100	93.023	Mesocricetus_auratus
ENSCAFG00020027112	YTHDC1	100	96.482	ENSMICG00000034640	YTHDC1	100	96.482	Microcebus_murinus
ENSCAFG00020027112	YTHDC1	100	93.297	ENSMOCG00000020201	Ythdc1	100	93.297	Microtus_ochrogaster
ENSCAFG00020027112	YTHDC1	93	88.462	ENSMODG00000020754	-	92	88.757	Monodelphis_domestica
ENSCAFG00020027112	YTHDC1	96	52.131	ENSMODG00000010076	-	60	62.260	Monodelphis_domestica
ENSCAFG00020027112	YTHDC1	64	58.511	ENSMODG00000009173	-	88	62.319	Monodelphis_domestica
ENSCAFG00020027112	YTHDC1	50	56.676	ENSMODG00000004117	-	92	63.259	Monodelphis_domestica
ENSCAFG00020027112	YTHDC1	86	69.932	ENSMODG00000014337	-	95	70.960	Monodelphis_domestica
ENSCAFG00020027112	YTHDC1	58	67.797	ENSMALG00000013412	ythdc1	56	68.378	Monopterus_albus
ENSCAFG00020027112	YTHDC1	93	93.639	MGP_CAROLIEiJ_G0027347	Ythdc1	97	91.257	Mus_caroli
ENSCAFG00020027112	YTHDC1	93	93.491	ENSMUSG00000035851	Ythdc1	93	92.751	Mus_musculus
ENSCAFG00020027112	YTHDC1	93	93.787	MGP_PahariEiJ_G0017126	Ythdc1	93	93.047	Mus_pahari
ENSCAFG00020027112	YTHDC1	93	93.787	MGP_SPRETEiJ_G0028339	Ythdc1	93	93.047	Mus_spretus
ENSCAFG00020027112	YTHDC1	93	73.932	ENSMPUG00000001743	YTHDC1	53	99.739	Mustela_putorius_furo
ENSCAFG00020027112	YTHDC1	99	98.056	ENSMLUG00000016300	YTHDC1	100	98.056	Myotis_lucifugus
ENSCAFG00020027112	YTHDC1	60	88.889	ENSNGAG00000024000	Ythdc1	93	88.009	Nannospalax_galili
ENSCAFG00020027112	YTHDC1	57	60.890	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSCAFG00020027112	YTHDC1	99	95.885	ENSNLEG00000009202	YTHDC1	99	95.885	Nomascus_leucogenys
ENSCAFG00020027112	YTHDC1	80	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSCAFG00020027112	YTHDC1	73	98.017	ENSOPRG00000008986	YTHDC1	74	98.017	Ochotona_princeps
ENSCAFG00020027112	YTHDC1	100	95.616	ENSODEG00000001715	YTHDC1	100	95.616	Octodon_degus
ENSCAFG00020027112	YTHDC1	68	75.000	ENSONIG00000012651	ythdc1	65	69.176	Oreochromis_niloticus
ENSCAFG00020027112	YTHDC1	88	76.183	ENSOANG00000014398	YTHDC1	55	95.443	Ornithorhynchus_anatinus
ENSCAFG00020027112	YTHDC1	93	81.885	ENSOCUG00000015886	YTHDC1	56	95.960	Oryctolagus_cuniculus
ENSCAFG00020027112	YTHDC1	57	58.050	ENSORLG00000030544	ythdc1	61	68.856	Oryzias_latipes
ENSCAFG00020027112	YTHDC1	57	57.370	ENSORLG00020019316	ythdc1	61	68.856	Oryzias_latipes_hni
ENSCAFG00020027112	YTHDC1	57	61.149	ENSOMEG00000000551	ythdc1	60	64.977	Oryzias_melastigma
ENSCAFG00020027112	YTHDC1	100	96.990	ENSOGAG00000003362	YTHDC1	100	96.990	Otolemur_garnettii
ENSCAFG00020027112	YTHDC1	100	97.671	ENSOARG00000008633	YTHDC1	100	97.671	Ovis_aries
ENSCAFG00020027112	YTHDC1	100	96.346	ENSPPAG00000041315	YTHDC1	100	96.346	Pan_paniscus
ENSCAFG00020027112	YTHDC1	100	98.374	ENSPPRG00000011979	YTHDC1	100	98.374	Panthera_pardus
ENSCAFG00020027112	YTHDC1	99	98.077	ENSPTIG00000015527	YTHDC1	100	98.077	Panthera_tigris_altaica
ENSCAFG00020027112	YTHDC1	100	96.346	ENSPTRG00000016105	YTHDC1	100	96.346	Pan_troglodytes
ENSCAFG00020027112	YTHDC1	100	96.482	ENSPANG00000021590	YTHDC1	100	96.482	Papio_anubis
ENSCAFG00020027112	YTHDC1	78	83.803	ENSPKIG00000018497	ythdc1	93	69.465	Paramormyrops_kingsleyae
ENSCAFG00020027112	YTHDC1	91	86.527	ENSPSIG00000002782	YTHDC1	92	79.712	Pelodiscus_sinensis
ENSCAFG00020027112	YTHDC1	50	64.068	ENSPMGG00000000970	-	73	64.189	Periophthalmus_magnuspinnatus
ENSCAFG00020027112	YTHDC1	99	95.978	ENSPEMG00000013850	Ythdc1	100	95.978	Peromyscus_maniculatus_bairdii
ENSCAFG00020027112	YTHDC1	93	88.314	ENSPCIG00000006870	YTHDC1	92	88.609	Phascolarctos_cinereus
ENSCAFG00020027112	YTHDC1	57	57.047	ENSPFOG00000013404	ythdc1	60	64.989	Poecilia_formosa
ENSCAFG00020027112	YTHDC1	60	58.887	ENSPLAG00000011079	ythdc1	85	64.989	Poecilia_latipinna
ENSCAFG00020027112	YTHDC1	57	57.047	ENSPMEG00000009238	ythdc1	60	64.989	Poecilia_mexicana
ENSCAFG00020027112	YTHDC1	70	59.952	ENSPREG00000016973	ythdc1	59	58.654	Poecilia_reticulata
ENSCAFG00020027112	YTHDC1	87	97.480	ENSPPYG00000014726	YTHDC1	100	97.480	Pongo_abelii
ENSCAFG00020027112	YTHDC1	77	88.636	ENSPCAG00000009607	YTHDC1	77	88.182	Procavia_capensis
ENSCAFG00020027112	YTHDC1	100	92.287	ENSPCOG00000019105	YTHDC1	100	92.287	Propithecus_coquereli
ENSCAFG00020027112	YTHDC1	100	96.170	ENSPVAG00000015551	YTHDC1	100	96.170	Pteropus_vampyrus
ENSCAFG00020027112	YTHDC1	57	60.780	ENSPNYG00000011687	ythdc1	59	66.133	Pundamilia_nyererei
ENSCAFG00020027112	YTHDC1	93	69.075	ENSPNAG00000028365	ythdc1	93	69.164	Pygocentrus_nattereri
ENSCAFG00020027112	YTHDC1	93	91.387	ENSRNOG00000001996	Ythdc1	93	91.971	Rattus_norvegicus
ENSCAFG00020027112	YTHDC1	99	95.342	ENSRBIG00000028279	YTHDC1	99	95.342	Rhinopithecus_bieti
ENSCAFG00020027112	YTHDC1	100	97.674	ENSRROG00000035028	YTHDC1	100	97.674	Rhinopithecus_roxellana
ENSCAFG00020027112	YTHDC1	100	96.752	ENSSBOG00000022353	YTHDC1	100	96.752	Saimiri_boliviensis_boliviensis
ENSCAFG00020027112	YTHDC1	93	87.278	ENSSHAG00000002538	YTHDC1	91	88.456	Sarcophilus_harrisii
ENSCAFG00020027112	YTHDC1	93	68.696	ENSSFOG00015003298	ythdc1	60	86.493	Scleropages_formosus
ENSCAFG00020027112	YTHDC1	56	60.762	ENSSMAG00000009086	ythdc1	60	65.747	Scophthalmus_maximus
ENSCAFG00020027112	YTHDC1	57	57.727	ENSSDUG00000022008	ythdc1	59	67.048	Seriola_dumerili
ENSCAFG00020027112	YTHDC1	57	57.727	ENSSLDG00000007926	ythdc1	59	67.048	Seriola_lalandi_dorsalis
ENSCAFG00020027112	YTHDC1	79	99.307	ENSSARG00000010960	YTHDC1	100	99.307	Sorex_araneus
ENSCAFG00020027112	YTHDC1	93	82.500	ENSSPUG00000009357	YTHDC1	62	96.200	Sphenodon_punctatus
ENSCAFG00020027112	YTHDC1	57	62.615	ENSSPAG00000011449	ythdc1	59	67.661	Stegastes_partitus
ENSCAFG00020027112	YTHDC1	99	98.061	ENSSSCG00000035505	YTHDC1	100	97.027	Sus_scrofa
ENSCAFG00020027112	YTHDC1	93	85.968	ENSTGUG00000004452	-	59	97.136	Taeniopygia_guttata
ENSCAFG00020027112	YTHDC1	92	47.826	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSCAFG00020027112	YTHDC1	87	60.738	ENSTNIG00000013243	ythdc1	89	66.047	Tetraodon_nigroviridis
ENSCAFG00020027112	YTHDC1	93	86.686	ENSTBEG00000011546	YTHDC1	92	86.982	Tupaia_belangeri
ENSCAFG00020027112	YTHDC1	100	97.808	ENSTTRG00000005083	YTHDC1	100	97.808	Tursiops_truncatus
ENSCAFG00020027112	YTHDC1	93	99.411	ENSUAMG00000010388	YTHDC1	100	99.411	Ursus_americanus
ENSCAFG00020027112	YTHDC1	99	84.466	ENSUMAG00000013668	YTHDC1	98	84.466	Ursus_maritimus
ENSCAFG00020027112	YTHDC1	100	95.068	ENSVPAG00000009040	YTHDC1	100	95.068	Vicugna_pacos
ENSCAFG00020027112	YTHDC1	99	98.765	ENSVVUG00000005387	YTHDC1	100	99.853	Vulpes_vulpes
ENSCAFG00020027112	YTHDC1	92	73.185	ENSXETG00000017960	ythdc1	91	71.429	Xenopus_tropicalis
ENSCAFG00020027112	YTHDC1	50	50.534	ENSXCOG00000000530	ythdc1	79	52.308	Xiphophorus_couchianus
ENSCAFG00020027112	YTHDC1	57	59.202	ENSXMAG00000005196	ythdc1	61	64.908	Xiphophorus_maculatus