EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020027141 (Gene tree)
Gene ID: 112660764
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 81646 bases
Position: chrQKWQ01001535.1:5427982-5509627
Accession: 112660764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020035043	SpoU_methylase	PF00588.19	2.8e-31	1	1
ENSCAFP00020035040	SpoU_methylase	PF00588.19	2.9e-31	1	1
ENSCAFP00020035041	SpoU_methylase	PF00588.19	2.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020040448	TARBP1-203	4788	-	ENSCAFP00020035043	1595 (aa)	-	-
ENSCAFT00020040446	TARBP1-202	4869	XM_025448457	ENSCAFP00020035041	1622 (aa)	XP_025304242	-
ENSCAFT00020040445	TARBP1-201	4881	-	ENSCAFP00020035040	1626 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020027141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020027141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020027141	TARBP1	99	85.153	ENSG00000059588	TARBP1	99	84.540	Homo_sapiens
ENSCAFG00020027141	TARBP1	99	41.889	ENSAPOG00000016419	si:dkey-85a20.4	86	45.175	Acanthochromis_polyacanthus
ENSCAFG00020027141	TARBP1	84	92.768	ENSAMEG00000003359	TARBP1	100	92.768	Ailuropoda_melanoleuca
ENSCAFG00020027141	TARBP1	99	41.667	ENSATEG00000020266	si:dkey-85a20.4	85	44.986	Anabas_testudineus
ENSCAFG00020027141	TARBP1	84	67.128	ENSAPLG00000007666	TARBP1	99	67.683	Anas_platyrhynchos
ENSCAFG00020027141	TARBP1	99	57.413	ENSACAG00000001142	TARBP1	88	60.351	Anolis_carolinensis
ENSCAFG00020027141	TARBP1	92	88.372	ENSANAG00000022031	TARBP1	95	92.857	Aotus_nancymaae
ENSCAFG00020027141	TARBP1	100	84.850	ENSBTAG00000004517	TARBP1	99	85.265	Bos_taurus
ENSCAFG00020027141	TARBP1	99	84.049	ENSCJAG00000018155	TARBP1	99	83.436	Callithrix_jacchus
ENSCAFG00020027141	TARBP1	88	99.373	ENSCAFG00000011533	TARBP1	100	99.506	Canis_familiaris
ENSCAFG00020027141	TARBP1	99	83.640	ENSCHIG00000011437	TARBP1	99	83.456	Capra_hircus
ENSCAFG00020027141	TARBP1	82	83.922	ENSTSYG00000010382	TARBP1	99	83.922	Carlito_syrichta
ENSCAFG00020027141	TARBP1	79	69.490	ENSCAPG00000010831	TARBP1	99	69.490	Cavia_aperea
ENSCAFG00020027141	TARBP1	99	75.586	ENSCPOG00000013995	TARBP1	99	76.079	Cavia_porcellus
ENSCAFG00020027141	TARBP1	99	84.601	ENSCCAG00000037278	TARBP1	99	83.988	Cebus_capucinus
ENSCAFG00020027141	TARBP1	99	85.049	ENSCATG00000011754	TARBP1	99	84.375	Cercocebus_atys
ENSCAFG00020027141	TARBP1	83	78.976	ENSCLAG00000003655	TARBP1	99	78.976	Chinchilla_lanigera
ENSCAFG00020027141	TARBP1	79	86.003	ENSCSAG00000010100	TARBP1	99	86.003	Chlorocebus_sabaeus
ENSCAFG00020027141	TARBP1	94	64.782	ENSCPBG00000005587	TARBP1	85	71.467	Chrysemys_picta_bellii
ENSCAFG00020027141	TARBP1	84	86.060	ENSCANG00000034343	TARBP1	99	86.060	Colobus_angolensis_palliatus
ENSCAFG00020027141	TARBP1	99	73.115	ENSCGRG00001016690	Tarbp1	99	72.621	Cricetulus_griseus_chok1gshd
ENSCAFG00020027141	TARBP1	90	74.253	ENSCGRG00000016893	Tarbp1	95	75.921	Cricetulus_griseus_crigri
ENSCAFG00020027141	TARBP1	99	39.149	ENSCSEG00000005255	si:dkey-85a20.4	86	45.433	Cynoglossus_semilaevis
ENSCAFG00020027141	TARBP1	99	42.105	ENSDARG00000079055	si:dkey-85a20.4	99	53.287	Danio_rerio
ENSCAFG00020027141	TARBP1	99	82.272	ENSDNOG00000008637	TARBP1	99	81.130	Dasypus_novemcinctus
ENSCAFG00020027141	TARBP1	80	74.306	ENSDORG00000007984	Tarbp1	100	74.306	Dipodomys_ordii
ENSCAFG00020027141	TARBP1	100	88.174	ENSEASG00005000252	TARBP1	100	87.255	Equus_asinus_asinus
ENSCAFG00020027141	TARBP1	100	88.411	ENSECAG00000023673	TARBP1	100	89.047	Equus_caballus
ENSCAFG00020027141	TARBP1	85	44.263	ENSELUG00000012193	si:dkey-85a20.4	86	44.334	Esox_lucius
ENSCAFG00020027141	TARBP1	100	86.266	ENSFCAG00000014183	TARBP1	100	86.389	Felis_catus
ENSCAFG00020027141	TARBP1	80	67.688	ENSFALG00000013565	TARBP1	100	67.249	Ficedula_albicollis
ENSCAFG00020027141	TARBP1	79	75.783	ENSFDAG00000001308	TARBP1	99	75.783	Fukomys_damarensis
ENSCAFG00020027141	TARBP1	98	50.259	ENSFHEG00000007565	si:dkey-85a20.4	85	53.561	Fundulus_heteroclitus
ENSCAFG00020027141	TARBP1	83	43.249	ENSGMOG00000004549	si:dkey-85a20.4	98	43.249	Gadus_morhua
ENSCAFG00020027141	TARBP1	99	59.055	ENSGALG00000011000	TARBP1	88	62.333	Gallus_gallus
ENSCAFG00020027141	TARBP1	85	44.688	ENSGAFG00000007387	si:dkey-85a20.4	85	44.688	Gambusia_affinis
ENSCAFG00020027141	TARBP1	85	44.531	ENSGACG00000005865	si:dkey-85a20.4	99	44.531	Gasterosteus_aculeatus
ENSCAFG00020027141	TARBP1	99	63.575	ENSGAGG00000012102	TARBP1	91	69.480	Gopherus_agassizii
ENSCAFG00020027141	TARBP1	84	83.406	ENSGGOG00000022879	TARBP1	99	83.479	Gorilla_gorilla
ENSCAFG00020027141	TARBP1	86	46.165	ENSHBUG00000008877	si:dkey-85a20.4	85	46.094	Haplochromis_burtoni
ENSCAFG00020027141	TARBP1	99	77.600	ENSHGLG00000011592	TARBP1	99	77.127	Heterocephalus_glaber_female
ENSCAFG00020027141	TARBP1	98	76.955	ENSHGLG00100015169	TARBP1	99	80.000	Heterocephalus_glaber_male
ENSCAFG00020027141	TARBP1	99	40.206	ENSIPUG00000005249	si:dkey-85a20.4	84	43.188	Ictalurus_punctatus
ENSCAFG00020027141	TARBP1	88	76.462	ENSSTOG00000032291	TARBP1	99	84.444	Ictidomys_tridecemlineatus
ENSCAFG00020027141	TARBP1	92	72.429	ENSJJAG00000017840	Tarbp1	99	72.429	Jaculus_jaculus
ENSCAFG00020027141	TARBP1	79	46.854	ENSKMAG00000017546	si:dkey-85a20.4	76	45.248	Kryptolebias_marmoratus
ENSCAFG00020027141	TARBP1	65	50.067	ENSLBEG00000012132	si:dkey-85a20.4	74	50.201	Labrus_bergylta
ENSCAFG00020027141	TARBP1	99	50.507	ENSLACG00000004337	TARBP1	87	53.675	Latimeria_chalumnae
ENSCAFG00020027141	TARBP1	99	45.167	ENSLOCG00000016214	si:dkey-85a20.4	86	49.226	Lepisosteus_oculatus
ENSCAFG00020027141	TARBP1	96	81.738	ENSLAFG00000011394	TARBP1	99	81.526	Loxodonta_africana
ENSCAFG00020027141	TARBP1	99	82.555	ENSMFAG00000041068	TARBP1	99	81.723	Macaca_fascicularis
ENSCAFG00020027141	TARBP1	99	82.721	ENSMMUG00000021703	TARBP1	99	81.985	Macaca_mulatta
ENSCAFG00020027141	TARBP1	99	84.988	ENSMNEG00000045002	TARBP1	99	84.314	Macaca_nemestrina
ENSCAFG00020027141	TARBP1	84	86.377	ENSMLEG00000044182	TARBP1	99	86.377	Mandrillus_leucophaeus
ENSCAFG00020027141	TARBP1	99	42.805	ENSMAMG00000021760	si:dkey-85a20.4	86	45.804	Mastacembelus_armatus
ENSCAFG00020027141	TARBP1	86	46.175	ENSMZEG00005005751	si:dkey-85a20.4	85	46.105	Maylandia_zebra
ENSCAFG00020027141	TARBP1	99	72.991	ENSMAUG00000020968	Tarbp1	99	72.373	Mesocricetus_auratus
ENSCAFG00020027141	TARBP1	95	80.976	ENSMICG00000015280	TARBP1	99	76.460	Microcebus_murinus
ENSCAFG00020027141	TARBP1	99	72.109	ENSMOCG00000004128	Tarbp1	99	71.552	Microtus_ochrogaster
ENSCAFG00020027141	TARBP1	99	40.821	ENSMMOG00000007795	si:dkey-85a20.4	85	43.946	Mola_mola
ENSCAFG00020027141	TARBP1	99	71.231	ENSMODG00000008504	TARBP1	100	70.828	Monodelphis_domestica
ENSCAFG00020027141	TARBP1	99	41.151	ENSMALG00000002916	si:dkey-85a20.4	85	44.580	Monopterus_albus
ENSCAFG00020027141	TARBP1	99	71.985	MGP_CAROLIEiJ_G0031729	Tarbp1	99	71.429	Mus_caroli
ENSCAFG00020027141	TARBP1	99	71.614	ENSMUSG00000090290	Tarbp1	99	71.181	Mus_musculus
ENSCAFG00020027141	TARBP1	99	72.222	MGP_PahariEiJ_G0023326	Tarbp1	99	71.667	Mus_pahari
ENSCAFG00020027141	TARBP1	99	71.738	MGP_SPRETEiJ_G0032846	Tarbp1	99	71.305	Mus_spretus
ENSCAFG00020027141	TARBP1	77	89.398	ENSMPUG00000002802	TARBP1	100	89.398	Mustela_putorius_furo
ENSCAFG00020027141	TARBP1	84	76.834	ENSMLUG00000002414	TARBP1	100	76.834	Myotis_lucifugus
ENSCAFG00020027141	TARBP1	99	85.153	ENSNLEG00000002518	TARBP1	99	84.540	Nomascus_leucogenys
ENSCAFG00020027141	TARBP1	70	75.847	ENSMEUG00000011370	-	67	75.847	Notamacropus_eugenii
ENSCAFG00020027141	TARBP1	71	84.219	ENSOPRG00000013822	TARBP1	71	84.219	Ochotona_princeps
ENSCAFG00020027141	TARBP1	99	73.889	ENSODEG00000005238	TARBP1	99	73.259	Octodon_degus
ENSCAFG00020027141	TARBP1	85	45.904	ENSONIG00000009789	si:dkey-85a20.4	99	45.904	Oreochromis_niloticus
ENSCAFG00020027141	TARBP1	99	83.344	ENSOCUG00000017418	TARBP1	99	82.729	Oryctolagus_cuniculus
ENSCAFG00020027141	TARBP1	99	40.096	ENSORLG00000010529	si:dkey-85a20.4	85	43.592	Oryzias_latipes
ENSCAFG00020027141	TARBP1	99	40.466	ENSORLG00020019264	si:dkey-85a20.4	85	43.622	Oryzias_latipes_hni
ENSCAFG00020027141	TARBP1	99	40.513	ENSORLG00015003276	si:dkey-85a20.4	85	43.741	Oryzias_latipes_hsok
ENSCAFG00020027141	TARBP1	99	81.818	ENSOGAG00000002379	TARBP1	99	81.031	Otolemur_garnettii
ENSCAFG00020027141	TARBP1	96	85.385	ENSOARG00000003434	TARBP1	99	85.433	Ovis_aries
ENSCAFG00020027141	TARBP1	84	86.437	ENSPPAG00000028097	TARBP1	99	86.510	Pan_paniscus
ENSCAFG00020027141	TARBP1	100	79.741	ENSPPRG00000013561	TARBP1	100	87.037	Panthera_pardus
ENSCAFG00020027141	TARBP1	83	90.320	ENSPTIG00000009281	TARBP1	100	90.320	Panthera_tigris_altaica
ENSCAFG00020027141	TARBP1	99	85.153	ENSPTRG00000002124	TARBP1	99	84.479	Pan_troglodytes
ENSCAFG00020027141	TARBP1	99	85.049	ENSPANG00000021933	TARBP1	99	84.436	Papio_anubis
ENSCAFG00020027141	TARBP1	99	42.612	ENSPKIG00000016716	si:dkey-85a20.4	82	47.004	Paramormyrops_kingsleyae
ENSCAFG00020027141	TARBP1	79	69.440	ENSPSIG00000010699	TARBP1	99	69.440	Pelodiscus_sinensis
ENSCAFG00020027141	TARBP1	93	75.702	ENSPEMG00000006888	Tarbp1	98	75.599	Peromyscus_maniculatus_bairdii
ENSCAFG00020027141	TARBP1	92	81.553	ENSPCIG00000029710	TARBP1	99	81.553	Phascolarctos_cinereus
ENSCAFG00020027141	TARBP1	85	44.828	ENSPFOG00000013020	si:dkey-85a20.4	99	44.898	Poecilia_formosa
ENSCAFG00020027141	TARBP1	85	44.954	ENSPLAG00000006044	si:dkey-85a20.4	85	45.025	Poecilia_latipinna
ENSCAFG00020027141	TARBP1	99	41.503	ENSPMEG00000017857	si:dkey-85a20.4	85	45.025	Poecilia_mexicana
ENSCAFG00020027141	TARBP1	85	44.884	ENSPREG00000022753	si:dkey-85a20.4	85	44.954	Poecilia_reticulata
ENSCAFG00020027141	TARBP1	91	85.302	ENSPPYG00000000102	TARBP1	99	85.392	Pongo_abelii
ENSCAFG00020027141	TARBP1	87	86.364	ENSPCAG00000004808	TARBP1	85	86.364	Procavia_capensis
ENSCAFG00020027141	TARBP1	99	83.477	ENSPCOG00000005666	TARBP1	100	82.862	Propithecus_coquereli
ENSCAFG00020027141	TARBP1	99	69.595	ENSPVAG00000014798	TARBP1	99	69.533	Pteropus_vampyrus
ENSCAFG00020027141	TARBP1	86	45.319	ENSPNYG00000019135	si:dkey-85a20.4	85	45.248	Pundamilia_nyererei
ENSCAFG00020027141	TARBP1	99	68.151	ENSRNOG00000053574	Tarbp1	99	67.471	Rattus_norvegicus
ENSCAFG00020027141	TARBP1	98	79.462	ENSRBIG00000043362	TARBP1	99	90.625	Rhinopithecus_bieti
ENSCAFG00020027141	TARBP1	99	81.600	ENSRROG00000029527	TARBP1	96	92.857	Rhinopithecus_roxellana
ENSCAFG00020027141	TARBP1	89	84.906	ENSSBOG00000034503	TARBP1	99	93.478	Saimiri_boliviensis_boliviensis
ENSCAFG00020027141	TARBP1	83	75.037	ENSSHAG00000000013	TARBP1	100	75.037	Sarcophilus_harrisii
ENSCAFG00020027141	TARBP1	83	45.047	ENSSFOG00015002660	si:dkey-85a20.4	97	45.784	Scleropages_formosus
ENSCAFG00020027141	TARBP1	99	42.378	ENSSMAG00000007081	si:dkey-85a20.4	82	46.170	Scophthalmus_maximus
ENSCAFG00020027141	TARBP1	99	41.105	ENSSDUG00000023566	si:dkey-85a20.4	85	44.054	Seriola_dumerili
ENSCAFG00020027141	TARBP1	99	42.626	ENSSLDG00000020200	si:dkey-85a20.4	86	45.887	Seriola_lalandi_dorsalis
ENSCAFG00020027141	TARBP1	89	84.793	ENSSARG00000012207	TARBP1	89	84.793	Sorex_araneus
ENSCAFG00020027141	TARBP1	99	63.155	ENSSPUG00000015364	TARBP1	88	65.315	Sphenodon_punctatus
ENSCAFG00020027141	TARBP1	99	41.632	ENSSPAG00000007213	si:dkey-85a20.4	85	45.288	Stegastes_partitus
ENSCAFG00020027141	TARBP1	100	85.609	ENSSSCG00000010160	TARBP1	100	86.204	Sus_scrofa
ENSCAFG00020027141	TARBP1	80	67.278	ENSTGUG00000010214	TARBP1	100	67.278	Taeniopygia_guttata
ENSCAFG00020027141	TARBP1	94	39.057	ENSTNIG00000016586	si:dkey-85a20.4	99	44.113	Tetraodon_nigroviridis
ENSCAFG00020027141	TARBP1	91	84.821	ENSTTRG00000008707	TARBP1	96	84.821	Tursiops_truncatus
ENSCAFG00020027141	TARBP1	82	92.331	ENSUMAG00000006730	TARBP1	99	92.331	Ursus_maritimus
ENSCAFG00020027141	TARBP1	80	90.625	ENSVPAG00000007665	TARBP1	84	90.625	Vicugna_pacos
ENSCAFG00020027141	TARBP1	87	97.800	ENSVVUG00000007460	TARBP1	98	99.349	Vulpes_vulpes
ENSCAFG00020027141	TARBP1	84	55.660	ENSXETG00000016224	tarbp1	99	55.660	Xenopus_tropicalis
ENSCAFG00020027141	TARBP1	78	49.250	ENSXCOG00000011779	si:dkey-85a20.4	93	49.250	Xiphophorus_couchianus
ENSCAFG00020027141	TARBP1	65	43.454	ENSXMAG00000009600	si:dkey-85a20.4	100	43.454	Xiphophorus_maculatus