EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020027488 (Gene tree)
Gene ID: 112673507
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 16156 bases
Position: chrQKWQ01002044.1:3364271-3380426
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020035497	Suf	PF05843.14	3.1e-10	1	1
ENSCAFP00020035497	HAT	PF02184.16	2.4e-42	1	2
ENSCAFP00020035497	HAT	PF02184.16	2.4e-42	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020041002	CRNKL1-201	2311	-	ENSCAFP00020035497	687 (aa)	-	UPI00005A43C4

Gene Model

Click here to download ENSCAFG00020027488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020027488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020027488	CRNKL1	100	96.798	ENSG00000101343	CRNKL1	100	96.798	Homo_sapiens
ENSCAFG00020027488	CRNKL1	99	86.569	ENSAPOG00000009705	crnkl1	97	86.519	Acanthochromis_polyacanthus
ENSCAFG00020027488	CRNKL1	100	99.709	ENSAMEG00000000270	CRNKL1	83	99.709	Ailuropoda_melanoleuca
ENSCAFG00020027488	CRNKL1	98	86.647	ENSACIG00000015267	crnkl1	89	86.647	Amphilophus_citrinellus
ENSCAFG00020027488	CRNKL1	99	86.715	ENSAOCG00000021964	crnkl1	91	86.715	Amphiprion_ocellaris
ENSCAFG00020027488	CRNKL1	99	86.569	ENSAPEG00000015041	crnkl1	91	86.569	Amphiprion_percula
ENSCAFG00020027488	CRNKL1	99	86.618	ENSATEG00000001068	crnkl1	89	86.618	Anabas_testudineus
ENSCAFG00020027488	CRNKL1	99	90.684	ENSAPLG00000013105	CRNKL1	99	90.684	Anas_platyrhynchos
ENSCAFG00020027488	CRNKL1	99	92.826	ENSACAG00000005284	CRNKL1	99	92.826	Anolis_carolinensis
ENSCAFG00020027488	CRNKL1	92	97.785	ENSANAG00000024889	CRNKL1	100	97.785	Aotus_nancymaae
ENSCAFG00020027488	CRNKL1	99	87.740	ENSACLG00000010813	crnkl1	90	87.740	Astatotilapia_calliptera
ENSCAFG00020027488	CRNKL1	97	88.102	ENSAMXG00000018334	crnkl1	92	86.131	Astyanax_mexicanus
ENSCAFG00020027488	CRNKL1	100	98.253	ENSBTAG00000008472	CRNKL1	99	98.253	Bos_taurus
ENSCAFG00020027488	CRNKL1	93	62.364	WBGene00019762	M03F8.3	92	61.248	Caenorhabditis_elegans
ENSCAFG00020027488	CRNKL1	100	96.943	ENSCJAG00000005393	CRNKL1	100	96.943	Callithrix_jacchus
ENSCAFG00020027488	CRNKL1	100	100.000	ENSCAFG00000005333	CRNKL1	94	100.000	Canis_familiaris
ENSCAFG00020027488	CRNKL1	100	97.089	ENSCHIG00000013171	CRNKL1	99	97.089	Capra_hircus
ENSCAFG00020027488	CRNKL1	100	97.962	ENSTSYG00000004197	CRNKL1	100	97.962	Carlito_syrichta
ENSCAFG00020027488	CRNKL1	95	95.961	ENSCAPG00000010501	CRNKL1	99	95.961	Cavia_aperea
ENSCAFG00020027488	CRNKL1	100	96.215	ENSCPOG00000004418	CRNKL1	100	96.215	Cavia_porcellus
ENSCAFG00020027488	CRNKL1	100	96.943	ENSCCAG00000027037	CRNKL1	100	96.943	Cebus_capucinus
ENSCAFG00020027488	CRNKL1	100	97.089	ENSCATG00000034247	CRNKL1	100	97.089	Cercocebus_atys
ENSCAFG00020027488	CRNKL1	100	96.943	ENSCLAG00000013859	CRNKL1	100	96.943	Chinchilla_lanigera
ENSCAFG00020027488	CRNKL1	100	97.089	ENSCSAG00000011434	CRNKL1	100	97.089	Chlorocebus_sabaeus
ENSCAFG00020027488	CRNKL1	100	98.836	ENSCHOG00000006371	CRNKL1	84	98.836	Choloepus_hoffmanni
ENSCAFG00020027488	CRNKL1	99	93.869	ENSCPBG00000023501	CRNKL1	99	93.869	Chrysemys_picta_bellii
ENSCAFG00020027488	CRNKL1	96	69.637	ENSCING00000002709	-	99	67.982	Ciona_intestinalis
ENSCAFG00020027488	CRNKL1	100	97.234	ENSCANG00000038789	CRNKL1	100	97.234	Colobus_angolensis_palliatus
ENSCAFG00020027488	CRNKL1	100	97.817	ENSCGRG00001001115	-	99	97.817	Cricetulus_griseus_chok1gshd
ENSCAFG00020027488	CRNKL1	100	97.817	ENSCGRG00001000687	-	99	97.817	Cricetulus_griseus_chok1gshd
ENSCAFG00020027488	CRNKL1	100	97.817	ENSCGRG00000007854	Crnkl1	99	97.817	Cricetulus_griseus_crigri
ENSCAFG00020027488	CRNKL1	98	86.370	ENSCSEG00000005594	crnkl1	86	86.370	Cynoglossus_semilaevis
ENSCAFG00020027488	CRNKL1	97	87.688	ENSCVAG00000015172	crnkl1	92	85.547	Cyprinodon_variegatus
ENSCAFG00020027488	CRNKL1	96	87.160	ENSDARG00000007901	crnkl1	90	85.819	Danio_rerio
ENSCAFG00020027488	CRNKL1	99	98.977	ENSDNOG00000016226	CRNKL1	95	98.977	Dasypus_novemcinctus
ENSCAFG00020027488	CRNKL1	97	87.910	ENSDORG00000030174	-	99	87.910	Dipodomys_ordii
ENSCAFG00020027488	CRNKL1	100	96.392	ENSDORG00000000394	-	100	96.392	Dipodomys_ordii
ENSCAFG00020027488	CRNKL1	97	88.358	ENSDORG00000023724	-	99	88.358	Dipodomys_ordii
ENSCAFG00020027488	CRNKL1	97	68.935	FBgn0000377	crn	95	69.520	Drosophila_melanogaster
ENSCAFG00020027488	CRNKL1	100	85.298	ENSETEG00000003711	CRNKL1	84	85.298	Echinops_telfairi
ENSCAFG00020027488	CRNKL1	99	61.111	ENSEBUG00000013461	crnkl1	96	58.394	Eptatretus_burgeri
ENSCAFG00020027488	CRNKL1	100	99.418	ENSEASG00005002072	CRNKL1	100	99.418	Equus_asinus_asinus
ENSCAFG00020027488	CRNKL1	100	99.418	ENSECAG00000022215	CRNKL1	100	99.418	Equus_caballus
ENSCAFG00020027488	CRNKL1	100	96.215	ENSEEUG00000000413	CRNKL1	92	96.215	Erinaceus_europaeus
ENSCAFG00020027488	CRNKL1	97	86.377	ENSELUG00000015424	crnkl1	97	84.942	Esox_lucius
ENSCAFG00020027488	CRNKL1	100	99.709	ENSFCAG00000000714	CRNKL1	100	99.709	Felis_catus
ENSCAFG00020027488	CRNKL1	98	91.815	ENSFALG00000004611	CRNKL1	100	91.815	Ficedula_albicollis
ENSCAFG00020027488	CRNKL1	100	97.089	ENSFDAG00000000604	CRNKL1	100	97.089	Fukomys_damarensis
ENSCAFG00020027488	CRNKL1	98	86.776	ENSFHEG00000013163	crnkl1	88	86.776	Fundulus_heteroclitus
ENSCAFG00020027488	CRNKL1	97	86.228	ENSGMOG00000007609	crnkl1	94	84.694	Gadus_morhua
ENSCAFG00020027488	CRNKL1	99	93.723	ENSGALG00000008429	CRNKL1	99	93.723	Gallus_gallus
ENSCAFG00020027488	CRNKL1	97	87.237	ENSGAFG00000014249	crnkl1	90	85.547	Gambusia_affinis
ENSCAFG00020027488	CRNKL1	99	85.088	ENSGACG00000011852	crnkl1	89	86.807	Gasterosteus_aculeatus
ENSCAFG00020027488	CRNKL1	95	92.530	ENSGAGG00000021233	CRNKL1	100	92.730	Gopherus_agassizii
ENSCAFG00020027488	CRNKL1	100	96.798	ENSGGOG00000014176	CRNKL1	100	96.798	Gorilla_gorilla
ENSCAFG00020027488	CRNKL1	99	87.592	ENSHBUG00000005246	crnkl1	90	87.592	Haplochromis_burtoni
ENSCAFG00020027488	CRNKL1	100	96.943	ENSHGLG00000010856	CRNKL1	100	96.943	Heterocephalus_glaber_female
ENSCAFG00020027488	CRNKL1	100	96.943	ENSHGLG00100011521	CRNKL1	100	96.943	Heterocephalus_glaber_male
ENSCAFG00020027488	CRNKL1	97	84.708	ENSHCOG00000006420	crnkl1	98	83.284	Hippocampus_comes
ENSCAFG00020027488	CRNKL1	97	76.241	ENSIPUG00000006836	-	99	75.444	Ictalurus_punctatus
ENSCAFG00020027488	CRNKL1	94	87.827	ENSIPUG00000006751	crnkl1	93	86.119	Ictalurus_punctatus
ENSCAFG00020027488	CRNKL1	93	68.917	ENSIPUG00000000315	-	100	70.126	Ictalurus_punctatus
ENSCAFG00020027488	CRNKL1	100	98.253	ENSSTOG00000014747	CRNKL1	100	98.253	Ictidomys_tridecemlineatus
ENSCAFG00020027488	CRNKL1	100	96.017	ENSJJAG00000016926	Crnkl1	100	96.017	Jaculus_jaculus
ENSCAFG00020027488	CRNKL1	99	86.657	ENSKMAG00000003620	crnkl1	86	86.657	Kryptolebias_marmoratus
ENSCAFG00020027488	CRNKL1	97	71.025	ENSLBEG00000003543	crnkl1	92	71.345	Labrus_bergylta
ENSCAFG00020027488	CRNKL1	99	87.994	ENSLACG00000001129	CRNKL1	99	87.994	Latimeria_chalumnae
ENSCAFG00020027488	CRNKL1	97	89.458	ENSLOCG00000016889	crnkl1	95	88.012	Lepisosteus_oculatus
ENSCAFG00020027488	CRNKL1	100	98.692	ENSLAFG00000004512	CRNKL1	100	98.692	Loxodonta_africana
ENSCAFG00020027488	CRNKL1	100	97.089	ENSMFAG00000039893	CRNKL1	100	97.089	Macaca_fascicularis
ENSCAFG00020027488	CRNKL1	100	97.089	ENSMMUG00000007709	CRNKL1	100	97.089	Macaca_mulatta
ENSCAFG00020027488	CRNKL1	100	97.089	ENSMNEG00000037490	CRNKL1	100	97.089	Macaca_nemestrina
ENSCAFG00020027488	CRNKL1	100	97.089	ENSMLEG00000034885	CRNKL1	100	97.089	Mandrillus_leucophaeus
ENSCAFG00020027488	CRNKL1	99	86.277	ENSMAMG00000008757	crnkl1	90	86.277	Mastacembelus_armatus
ENSCAFG00020027488	CRNKL1	99	87.740	ENSMZEG00005022345	crnkl1	90	87.740	Maylandia_zebra
ENSCAFG00020027488	CRNKL1	99	93.003	ENSMGAG00000003452	CRNKL1	94	93.003	Meleagris_gallopavo
ENSCAFG00020027488	CRNKL1	100	97.671	ENSMAUG00000020764	Crnkl1	99	97.671	Mesocricetus_auratus
ENSCAFG00020027488	CRNKL1	100	98.399	ENSMICG00000006048	CRNKL1	100	98.399	Microcebus_murinus
ENSCAFG00020027488	CRNKL1	100	89.700	ENSMOCG00000000681	-	99	89.700	Microtus_ochrogaster
ENSCAFG00020027488	CRNKL1	97	69.369	ENSMOCG00000004179	-	96	69.585	Microtus_ochrogaster
ENSCAFG00020027488	CRNKL1	92	86.212	ENSMMOG00000017601	crnkl1	97	86.212	Mola_mola
ENSCAFG00020027488	CRNKL1	100	86.754	ENSMODG00000010857	-	99	86.754	Monodelphis_domestica
ENSCAFG00020027488	CRNKL1	100	92.816	ENSMODG00000005961	-	99	92.816	Monodelphis_domestica
ENSCAFG00020027488	CRNKL1	98	63.722	ENSMALG00000011211	crnkl1	89	63.583	Monopterus_albus
ENSCAFG00020027488	CRNKL1	100	98.253	MGP_CAROLIEiJ_G0024394	Crnkl1	99	98.253	Mus_caroli
ENSCAFG00020027488	CRNKL1	100	98.399	ENSMUSG00000001767	Crnkl1	99	98.399	Mus_musculus
ENSCAFG00020027488	CRNKL1	100	96.361	MGP_PahariEiJ_G0025838	Crnkl1	99	96.361	Mus_pahari
ENSCAFG00020027488	CRNKL1	100	98.253	MGP_SPRETEiJ_G0025312	Crnkl1	99	98.253	Mus_spretus
ENSCAFG00020027488	CRNKL1	100	99.563	ENSMPUG00000001226	CRNKL1	100	99.563	Mustela_putorius_furo
ENSCAFG00020027488	CRNKL1	100	98.547	ENSMLUG00000016513	CRNKL1	89	98.547	Myotis_lucifugus
ENSCAFG00020027488	CRNKL1	100	95.857	ENSNGAG00000023097	Crnkl1	100	95.857	Nannospalax_galili
ENSCAFG00020027488	CRNKL1	99	87.888	ENSNBRG00000007867	crnkl1	89	87.888	Neolamprologus_brichardi
ENSCAFG00020027488	CRNKL1	100	93.450	ENSNLEG00000009862	CRNKL1	100	93.450	Nomascus_leucogenys
ENSCAFG00020027488	CRNKL1	98	95.821	ENSMEUG00000012167	-	100	95.821	Notamacropus_eugenii
ENSCAFG00020027488	CRNKL1	100	86.047	ENSMEUG00000002361	-	99	86.047	Notamacropus_eugenii
ENSCAFG00020027488	CRNKL1	75	67.375	ENSOPRG00000009242	-	61	67.375	Ochotona_princeps
ENSCAFG00020027488	CRNKL1	100	96.798	ENSODEG00000012175	CRNKL1	100	96.798	Octodon_degus
ENSCAFG00020027488	CRNKL1	99	88.183	ENSONIG00000018728	crnkl1	89	88.183	Oreochromis_niloticus
ENSCAFG00020027488	CRNKL1	99	98.105	ENSOCUG00000015484	CRNKL1	83	98.105	Oryctolagus_cuniculus
ENSCAFG00020027488	CRNKL1	97	86.036	ENSORLG00000017240	crnkl1	94	82.318	Oryzias_latipes
ENSCAFG00020027488	CRNKL1	97	86.186	ENSORLG00020001742	crnkl1	89	86.186	Oryzias_latipes_hni
ENSCAFG00020027488	CRNKL1	97	86.186	ENSORLG00015019564	crnkl1	89	86.186	Oryzias_latipes_hsok
ENSCAFG00020027488	CRNKL1	99	85.109	ENSOMEG00000019895	crnkl1	91	85.109	Oryzias_melastigma
ENSCAFG00020027488	CRNKL1	100	97.671	ENSOGAG00000011544	CRNKL1	100	97.671	Otolemur_garnettii
ENSCAFG00020027488	CRNKL1	100	98.253	ENSOARG00000002150	CRNKL1	89	98.253	Ovis_aries
ENSCAFG00020027488	CRNKL1	99	95.441	ENSPPAG00000027847	CRNKL1	83	95.488	Pan_paniscus
ENSCAFG00020027488	CRNKL1	100	99.709	ENSPPRG00000001955	CRNKL1	100	99.709	Panthera_pardus
ENSCAFG00020027488	CRNKL1	100	99.709	ENSPTIG00000007393	CRNKL1	100	99.709	Panthera_tigris_altaica
ENSCAFG00020027488	CRNKL1	100	96.652	ENSPTRG00000030609	CRNKL1	100	96.652	Pan_troglodytes
ENSCAFG00020027488	CRNKL1	100	97.089	ENSPANG00000017420	CRNKL1	100	97.089	Papio_anubis
ENSCAFG00020027488	CRNKL1	96	83.008	ENSPKIG00000017093	crnkl1	89	82.258	Paramormyrops_kingsleyae
ENSCAFG00020027488	CRNKL1	99	92.679	ENSPSIG00000012705	CRNKL1	99	92.679	Pelodiscus_sinensis
ENSCAFG00020027488	CRNKL1	99	79.912	ENSPMGG00000006263	crnkl1	96	79.676	Periophthalmus_magnuspinnatus
ENSCAFG00020027488	CRNKL1	100	97.817	ENSPEMG00000000073	-	99	97.817	Peromyscus_maniculatus_bairdii
ENSCAFG00020027488	CRNKL1	99	82.558	ENSPMAG00000002250	crnkl1	99	82.558	Petromyzon_marinus
ENSCAFG00020027488	CRNKL1	100	95.342	ENSPCIG00000025825	CRNKL1	96	95.342	Phascolarctos_cinereus
ENSCAFG00020027488	CRNKL1	97	87.087	ENSPFOG00000005102	crnkl1	93	85.174	Poecilia_formosa
ENSCAFG00020027488	CRNKL1	97	87.087	ENSPLAG00000007288	crnkl1	90	85.051	Poecilia_latipinna
ENSCAFG00020027488	CRNKL1	97	87.237	ENSPMEG00000008865	crnkl1	93	85.320	Poecilia_mexicana
ENSCAFG00020027488	CRNKL1	97	86.787	ENSPREG00000012615	crnkl1	92	85.191	Poecilia_reticulata
ENSCAFG00020027488	CRNKL1	100	97.089	ENSPPYG00000010747	CRNKL1	81	97.089	Pongo_abelii
ENSCAFG00020027488	CRNKL1	99	92.941	ENSPCAG00000003296	CRNKL1	85	93.013	Procavia_capensis
ENSCAFG00020027488	CRNKL1	100	97.089	ENSPCOG00000017608	CRNKL1	83	97.089	Propithecus_coquereli
ENSCAFG00020027488	CRNKL1	100	99.127	ENSPVAG00000006207	CRNKL1	83	99.127	Pteropus_vampyrus
ENSCAFG00020027488	CRNKL1	99	87.592	ENSPNYG00000001977	crnkl1	90	87.592	Pundamilia_nyererei
ENSCAFG00020027488	CRNKL1	98	88.657	ENSPNAG00000001507	crnkl1	97	84.581	Pygocentrus_nattereri
ENSCAFG00020027488	CRNKL1	100	98.108	ENSRNOG00000040045	Crnkl1	99	98.108	Rattus_norvegicus
ENSCAFG00020027488	CRNKL1	100	98.399	ENSRNOG00000010587	Crnkl1	99	98.399	Rattus_norvegicus
ENSCAFG00020027488	CRNKL1	100	96.943	ENSRBIG00000031770	CRNKL1	100	96.943	Rhinopithecus_bieti
ENSCAFG00020027488	CRNKL1	100	96.798	ENSRROG00000040450	CRNKL1	100	96.798	Rhinopithecus_roxellana
ENSCAFG00020027488	CRNKL1	94	37.826	YLR117C	CLF1	99	37.916	Saccharomyces_cerevisiae
ENSCAFG00020027488	CRNKL1	100	97.234	ENSSBOG00000029672	CRNKL1	100	97.234	Saimiri_boliviensis_boliviensis
ENSCAFG00020027488	CRNKL1	96	74.659	ENSSHAG00000011199	CRNKL1	99	74.659	Sarcophilus_harrisii
ENSCAFG00020027488	CRNKL1	96	87.915	ENSSFOG00015000946	crnkl1	89	86.257	Scleropages_formosus
ENSCAFG00020027488	CRNKL1	99	85.359	ENSSMAG00000007933	crnkl1	87	86.587	Scophthalmus_maximus
ENSCAFG00020027488	CRNKL1	99	80.412	ENSSDUG00000012625	crnkl1	87	80.412	Seriola_dumerili
ENSCAFG00020027488	CRNKL1	99	87.168	ENSSLDG00000021413	crnkl1	88	87.168	Seriola_lalandi_dorsalis
ENSCAFG00020027488	CRNKL1	100	98.253	ENSSARG00000006443	CRNKL1	82	98.253	Sorex_araneus
ENSCAFG00020027488	CRNKL1	99	93.265	ENSSPUG00000005254	CRNKL1	99	93.265	Sphenodon_punctatus
ENSCAFG00020027488	CRNKL1	99	86.277	ENSSPAG00000016150	crnkl1	86	88.138	Stegastes_partitus
ENSCAFG00020027488	CRNKL1	100	99.418	ENSSSCG00000038587	CRNKL1	99	99.418	Sus_scrofa
ENSCAFG00020027488	CRNKL1	99	92.420	ENSTGUG00000007645	CRNKL1	98	92.420	Taeniopygia_guttata
ENSCAFG00020027488	CRNKL1	98	81.045	ENSTRUG00000015417	crnkl1	91	80.088	Takifugu_rubripes
ENSCAFG00020027488	CRNKL1	97	85.607	ENSTNIG00000010710	crnkl1	99	84.257	Tetraodon_nigroviridis
ENSCAFG00020027488	CRNKL1	92	97.310	ENSTBEG00000001304	CRNKL1	82	97.310	Tupaia_belangeri
ENSCAFG00020027488	CRNKL1	91	94.720	ENSTTRG00000000484	CRNKL1	81	94.778	Tursiops_truncatus
ENSCAFG00020027488	CRNKL1	100	99.709	ENSUAMG00000018586	CRNKL1	100	99.709	Ursus_americanus
ENSCAFG00020027488	CRNKL1	100	99.709	ENSUMAG00000024957	CRNKL1	100	99.709	Ursus_maritimus
ENSCAFG00020027488	CRNKL1	100	100.000	ENSVVUG00000012559	CRNKL1	82	100.000	Vulpes_vulpes
ENSCAFG00020027488	CRNKL1	99	90.975	ENSXETG00000009698	crnkl1	99	90.975	Xenopus_tropicalis
ENSCAFG00020027488	CRNKL1	97	86.357	ENSXCOG00000000824	crnkl1	91	84.627	Xiphophorus_couchianus
ENSCAFG00020027488	CRNKL1	97	87.237	ENSXMAG00000006896	crnkl1	91	85.484	Xiphophorus_maculatus