EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000001647 (Gene tree)
Gene ID: 105519392
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 43977 bases
Position: chrKN982145.1:695383-739359
Accession: 105519392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000000561	POP1	PF06978.11	3.5e-38	1	2
ENSCANP00000000561	POP1	PF06978.11	3.5e-38	2	2
ENSCANP00000000543	POP1	PF06978.11	3.7e-38	1	2
ENSCANP00000000543	POP1	PF06978.11	3.7e-38	2	2
ENSCANP00000000561	POPLD	PF08170.12	2.8e-27	1	1
ENSCANP00000000543	POPLD	PF08170.12	3.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000002035	POP1-201	4730	XM_011952728	ENSCANP00000000543	1024 (aa)	XP_011808118	A0A2K5H859
ENSCANT00000002393	POP1-202	2991	-	ENSCANP00000000561	996 (aa)	-	A0A2K5H879

Gene Model

Click here to download ENSCANG00000001647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000001647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000001647	POP1	100	96.777	ENSG00000104356	POP1	100	98.907	Homo_sapiens
ENSCANG00000001647	POP1	100	47.749	ENSAPOG00000008198	pop1	100	47.793	Acanthochromis_polyacanthus
ENSCANG00000001647	POP1	100	80.194	ENSAMEG00000000556	POP1	100	80.194	Ailuropoda_melanoleuca
ENSCANG00000001647	POP1	90	49.045	ENSACIG00000004169	POP1	100	46.029	Amphilophus_citrinellus
ENSCANG00000001647	POP1	100	47.264	ENSAOCG00000010991	pop1	100	47.075	Amphiprion_ocellaris
ENSCANG00000001647	POP1	91	47.320	ENSAPEG00000007607	pop1	96	47.732	Amphiprion_percula
ENSCANG00000001647	POP1	100	45.959	ENSATEG00000024814	POP1	100	46.132	Anabas_testudineus
ENSCANG00000001647	POP1	92	63.379	ENSAPLG00000014418	POP1	100	63.484	Anas_platyrhynchos
ENSCANG00000001647	POP1	100	56.647	ENSACAG00000016083	POP1	100	56.647	Anolis_carolinensis
ENSCANG00000001647	POP1	93	93.769	ENSANAG00000026360	POP1	100	93.769	Aotus_nancymaae
ENSCANG00000001647	POP1	93	52.861	ENSACLG00000010951	pop1	100	47.403	Astatotilapia_calliptera
ENSCANG00000001647	POP1	100	45.463	ENSAMXG00000014483	POP1	100	45.138	Astyanax_mexicanus
ENSCANG00000001647	POP1	100	80.859	ENSBTAG00000012596	POP1	100	80.859	Bos_taurus
ENSCANG00000001647	POP1	100	92.578	ENSCJAG00000015567	POP1	100	92.578	Callithrix_jacchus
ENSCANG00000001647	POP1	100	80.664	ENSCAFG00000000469	POP1	100	80.664	Canis_familiaris
ENSCANG00000001647	POP1	100	81.836	ENSCAFG00020026765	POP1	100	81.836	Canis_lupus_dingo
ENSCANG00000001647	POP1	100	80.976	ENSCHIG00000017066	POP1	100	80.976	Capra_hircus
ENSCANG00000001647	POP1	100	85.938	ENSTSYG00000003097	POP1	100	85.938	Carlito_syrichta
ENSCANG00000001647	POP1	100	77.551	ENSCAPG00000007251	POP1	100	77.551	Cavia_aperea
ENSCANG00000001647	POP1	100	80.371	ENSCPOG00000002901	POP1	100	80.371	Cavia_porcellus
ENSCANG00000001647	POP1	100	92.578	ENSCCAG00000018939	POP1	100	92.578	Cebus_capucinus
ENSCANG00000001647	POP1	100	98.145	ENSCATG00000040916	POP1	100	98.145	Cercocebus_atys
ENSCANG00000001647	POP1	100	81.934	ENSCLAG00000007208	POP1	97	81.934	Chinchilla_lanigera
ENSCANG00000001647	POP1	90	97.397	ENSCSAG00000012340	POP1	99	97.397	Chlorocebus_sabaeus
ENSCANG00000001647	POP1	95	79.508	ENSCHOG00000011432	POP1	100	79.508	Choloepus_hoffmanni
ENSCANG00000001647	POP1	100	65.370	ENSCPBG00000006373	POP1	100	65.370	Chrysemys_picta_bellii
ENSCANG00000001647	POP1	82	37.743	ENSCING00000008323	-	90	36.396	Ciona_intestinalis
ENSCANG00000001647	POP1	100	76.780	ENSCGRG00001017308	Pop1	100	76.780	Cricetulus_griseus_chok1gshd
ENSCANG00000001647	POP1	100	71.220	ENSCGRG00000010824	Pop1	100	71.220	Cricetulus_griseus_crigri
ENSCANG00000001647	POP1	100	45.455	ENSCSEG00000008737	POP1	100	45.636	Cynoglossus_semilaevis
ENSCANG00000001647	POP1	100	47.154	ENSCVAG00000022248	pop1	100	47.154	Cyprinodon_variegatus
ENSCANG00000001647	POP1	100	77.413	ENSDNOG00000019974	POP1	100	77.413	Dasypus_novemcinctus
ENSCANG00000001647	POP1	100	72.559	ENSDORG00000015384	Pop1	100	72.461	Dipodomys_ordii
ENSCANG00000001647	POP1	61	33.070	FBgn0026702	l(1)G0045	70	32.965	Drosophila_melanogaster
ENSCANG00000001647	POP1	89	70.877	ENSETEG00000007839	POP1	88	70.877	Echinops_telfairi
ENSCANG00000001647	POP1	100	83.496	ENSEASG00005003189	POP1	98	83.496	Equus_asinus_asinus
ENSCANG00000001647	POP1	100	83.398	ENSECAG00000024236	POP1	100	83.398	Equus_caballus
ENSCANG00000001647	POP1	69	80.000	ENSEEUG00000003050	-	70	80.556	Erinaceus_europaeus
ENSCANG00000001647	POP1	100	47.343	ENSELUG00000003526	pop1	100	47.064	Esox_lucius
ENSCANG00000001647	POP1	100	83.594	ENSFCAG00000002168	POP1	100	83.594	Felis_catus
ENSCANG00000001647	POP1	100	60.638	ENSFALG00000005711	POP1	100	60.773	Ficedula_albicollis
ENSCANG00000001647	POP1	100	82.227	ENSFDAG00000017068	POP1	100	82.227	Fukomys_damarensis
ENSCANG00000001647	POP1	91	50.894	ENSFHEG00000019518	pop1	100	46.080	Fundulus_heteroclitus
ENSCANG00000001647	POP1	85	51.278	ENSGMOG00000000659	POP1	94	51.278	Gadus_morhua
ENSCANG00000001647	POP1	100	47.587	ENSGAFG00000019770	POP1	100	47.587	Gambusia_affinis
ENSCANG00000001647	POP1	100	46.139	ENSGACG00000003499	pop1	100	46.139	Gasterosteus_aculeatus
ENSCANG00000001647	POP1	100	64.147	ENSGAGG00000011737	POP1	98	64.341	Gopherus_agassizii
ENSCANG00000001647	POP1	100	96.680	ENSGGOG00000003176	POP1	100	96.680	Gorilla_gorilla
ENSCANG00000001647	POP1	100	46.987	ENSHBUG00000021583	pop1	100	46.931	Haplochromis_burtoni
ENSCANG00000001647	POP1	100	81.348	ENSHGLG00000006029	POP1	100	81.348	Heterocephalus_glaber_female
ENSCANG00000001647	POP1	100	81.348	ENSHGLG00100016879	POP1	100	81.348	Heterocephalus_glaber_male
ENSCANG00000001647	POP1	90	49.201	ENSHCOG00000013888	pop1	96	49.201	Hippocampus_comes
ENSCANG00000001647	POP1	100	44.859	ENSIPUG00000018336	pop1	91	62.651	Ictalurus_punctatus
ENSCANG00000001647	POP1	100	83.203	ENSSTOG00000011455	POP1	97	83.203	Ictidomys_tridecemlineatus
ENSCANG00000001647	POP1	100	78.905	ENSJJAG00000013325	Pop1	100	78.905	Jaculus_jaculus
ENSCANG00000001647	POP1	100	46.507	ENSKMAG00000001346	POP1	100	46.456	Kryptolebias_marmoratus
ENSCANG00000001647	POP1	80	54.351	ENSLBEG00000024457	POP1	95	49.723	Labrus_bergylta
ENSCANG00000001647	POP1	93	56.124	ENSLACG00000012498	POP1	99	56.212	Latimeria_chalumnae
ENSCANG00000001647	POP1	100	51.431	ENSLOCG00000009817	POP1	100	51.625	Lepisosteus_oculatus
ENSCANG00000001647	POP1	100	82.782	ENSLAFG00000010770	POP1	100	82.782	Loxodonta_africana
ENSCANG00000001647	POP1	100	98.242	ENSMFAG00000000347	POP1	100	98.242	Macaca_fascicularis
ENSCANG00000001647	POP1	100	97.656	ENSMNEG00000036870	POP1	100	97.656	Macaca_nemestrina
ENSCANG00000001647	POP1	100	97.949	ENSMLEG00000034986	POP1	100	97.949	Mandrillus_leucophaeus
ENSCANG00000001647	POP1	100	46.408	ENSMAMG00000004040	pop1	100	46.591	Mastacembelus_armatus
ENSCANG00000001647	POP1	100	47.458	ENSMZEG00005025448	pop1	100	47.403	Maylandia_zebra
ENSCANG00000001647	POP1	100	58.310	ENSMGAG00000012167	POP1	100	58.940	Meleagris_gallopavo
ENSCANG00000001647	POP1	100	76.683	ENSMAUG00000017537	Pop1	100	76.683	Mesocricetus_auratus
ENSCANG00000001647	POP1	100	86.621	ENSMICG00000004361	POP1	100	86.621	Microcebus_murinus
ENSCANG00000001647	POP1	100	75.293	ENSMOCG00000006356	Pop1	100	75.977	Microtus_ochrogaster
ENSCANG00000001647	POP1	100	43.829	ENSMMOG00000018242	pop1	100	43.829	Mola_mola
ENSCANG00000001647	POP1	100	69.603	ENSMODG00000006561	POP1	100	69.149	Monodelphis_domestica
ENSCANG00000001647	POP1	93	51.425	ENSMALG00000012621	POP1	100	47.249	Monopterus_albus
ENSCANG00000001647	POP1	100	76.367	MGP_CAROLIEiJ_G0019726	Pop1	100	76.367	Mus_caroli
ENSCANG00000001647	POP1	100	76.758	ENSMUSG00000022325	Pop1	100	76.758	Mus_musculus
ENSCANG00000001647	POP1	100	76.855	MGP_PahariEiJ_G0019735	Pop1	100	76.855	Mus_pahari
ENSCANG00000001647	POP1	100	76.367	MGP_SPRETEiJ_G0020622	Pop1	100	76.367	Mus_spretus
ENSCANG00000001647	POP1	100	81.809	ENSMPUG00000015250	POP1	100	81.712	Mustela_putorius_furo
ENSCANG00000001647	POP1	100	77.485	ENSMLUG00000010204	POP1	100	77.583	Myotis_lucifugus
ENSCANG00000001647	POP1	100	81.738	ENSNGAG00000001582	Pop1	100	81.738	Nannospalax_galili
ENSCANG00000001647	POP1	89	47.798	ENSNBRG00000002356	pop1	94	47.983	Neolamprologus_brichardi
ENSCANG00000001647	POP1	100	95.703	ENSNLEG00000002541	POP1	100	95.703	Nomascus_leucogenys
ENSCANG00000001647	POP1	90	72.000	ENSMEUG00000003118	POP1	92	72.000	Notamacropus_eugenii
ENSCANG00000001647	POP1	100	79.065	ENSOPRG00000007667	POP1	100	78.870	Ochotona_princeps
ENSCANG00000001647	POP1	100	80.019	ENSODEG00000003984	POP1	100	80.019	Octodon_degus
ENSCANG00000001647	POP1	100	48.004	ENSONIG00000016445	pop1	100	48.004	Oreochromis_niloticus
ENSCANG00000001647	POP1	59	70.122	ENSOANG00000001278	-	94	70.732	Ornithorhynchus_anatinus
ENSCANG00000001647	POP1	100	81.633	ENSOCUG00000017400	POP1	100	81.633	Oryctolagus_cuniculus
ENSCANG00000001647	POP1	100	46.845	ENSORLG00000002839	pop1	100	47.510	Oryzias_latipes
ENSCANG00000001647	POP1	90	49.468	ENSORLG00020022450	POP1	96	49.363	Oryzias_latipes_hni
ENSCANG00000001647	POP1	92	49.583	ENSORLG00015012746	POP1	100	47.605	Oryzias_latipes_hsok
ENSCANG00000001647	POP1	100	47.104	ENSOMEG00000006915	pop1	99	47.435	Oryzias_melastigma
ENSCANG00000001647	POP1	100	83.594	ENSOGAG00000001466	POP1	100	83.594	Otolemur_garnettii
ENSCANG00000001647	POP1	100	96.875	ENSPPAG00000018410	POP1	100	96.875	Pan_paniscus
ENSCANG00000001647	POP1	100	83.512	ENSPPRG00000005002	POP1	100	83.512	Panthera_pardus
ENSCANG00000001647	POP1	100	83.902	ENSPTIG00000016527	POP1	100	83.902	Panthera_tigris_altaica
ENSCANG00000001647	POP1	100	96.875	ENSPTRG00000020458	POP1	100	96.875	Pan_troglodytes
ENSCANG00000001647	POP1	100	97.656	ENSPANG00000009704	POP1	100	97.656	Papio_anubis
ENSCANG00000001647	POP1	100	48.522	ENSPKIG00000016325	POP1	100	48.851	Paramormyrops_kingsleyae
ENSCANG00000001647	POP1	100	63.337	ENSPSIG00000012343	POP1	100	63.337	Pelodiscus_sinensis
ENSCANG00000001647	POP1	90	49.246	ENSPMGG00000022253	POP1	95	48.999	Periophthalmus_magnuspinnatus
ENSCANG00000001647	POP1	99	75.694	ENSPEMG00000023633	Pop1	100	75.694	Peromyscus_maniculatus_bairdii
ENSCANG00000001647	POP1	90	43.538	ENSPMAG00000003209	POP1	100	43.432	Petromyzon_marinus
ENSCANG00000001647	POP1	100	68.365	ENSPCIG00000012216	POP1	100	68.365	Phascolarctos_cinereus
ENSCANG00000001647	POP1	100	48.799	ENSPFOG00000012490	POP1	100	48.799	Poecilia_formosa
ENSCANG00000001647	POP1	100	48.654	ENSPLAG00000004646	POP1	100	48.654	Poecilia_latipinna
ENSCANG00000001647	POP1	100	48.993	ENSPMEG00000019592	POP1	100	48.993	Poecilia_mexicana
ENSCANG00000001647	POP1	100	48.607	ENSPREG00000020951	POP1	100	48.607	Poecilia_reticulata
ENSCANG00000001647	POP1	100	96.191	ENSPPYG00000018777	POP1	100	96.191	Pongo_abelii
ENSCANG00000001647	POP1	100	75.805	ENSPCAG00000016662	POP1	100	75.415	Procavia_capensis
ENSCANG00000001647	POP1	100	87.012	ENSPCOG00000019420	POP1	100	87.012	Propithecus_coquereli
ENSCANG00000001647	POP1	100	81.951	ENSPVAG00000014468	POP1	100	81.951	Pteropus_vampyrus
ENSCANG00000001647	POP1	89	48.391	ENSPNYG00000004476	pop1	95	48.562	Pundamilia_nyererei
ENSCANG00000001647	POP1	100	45.803	ENSPNAG00000000265	pop1	100	43.522	Pygocentrus_nattereri
ENSCANG00000001647	POP1	100	77.441	ENSRNOG00000005243	Pop1	100	77.441	Rattus_norvegicus
ENSCANG00000001647	POP1	100	98.438	ENSRBIG00000007996	POP1	100	98.438	Rhinopithecus_bieti
ENSCANG00000001647	POP1	100	98.633	ENSRROG00000012334	POP1	100	98.633	Rhinopithecus_roxellana
ENSCANG00000001647	POP1	99	93.775	ENSSBOG00000020830	POP1	100	93.775	Saimiri_boliviensis_boliviensis
ENSCANG00000001647	POP1	100	68.925	ENSSHAG00000000296	POP1	100	68.925	Sarcophilus_harrisii
ENSCANG00000001647	POP1	100	46.699	ENSSFOG00015007429	pop1	99	46.425	Scleropages_formosus
ENSCANG00000001647	POP1	86	53.139	ENSSMAG00000010467	POP1	98	53.752	Scophthalmus_maximus
ENSCANG00000001647	POP1	100	46.516	ENSSDUG00000007817	POP1	100	46.881	Seriola_dumerili
ENSCANG00000001647	POP1	100	46.704	ENSSLDG00000012565	POP1	100	46.805	Seriola_lalandi_dorsalis
ENSCANG00000001647	POP1	100	59.748	ENSSPUG00000003550	-	100	60.019	Sphenodon_punctatus
ENSCANG00000001647	POP1	100	46.957	ENSSPAG00000014955	pop1	100	46.622	Stegastes_partitus
ENSCANG00000001647	POP1	100	81.738	ENSSSCG00000006078	POP1	100	81.738	Sus_scrofa
ENSCANG00000001647	POP1	92	57.822	ENSTGUG00000012011	-	100	57.822	Taeniopygia_guttata
ENSCANG00000001647	POP1	91	47.840	ENSTRUG00000010856	pop1	94	47.840	Takifugu_rubripes
ENSCANG00000001647	POP1	93	47.755	ENSTNIG00000013297	pop1	99	47.755	Tetraodon_nigroviridis
ENSCANG00000001647	POP1	95	80.655	ENSTBEG00000014214	POP1	100	80.655	Tupaia_belangeri
ENSCANG00000001647	POP1	100	79.980	ENSTTRG00000016071	POP1	100	79.980	Tursiops_truncatus
ENSCANG00000001647	POP1	99	78.381	ENSUAMG00000017309	POP1	100	78.381	Ursus_americanus
ENSCANG00000001647	POP1	92	89.879	ENSUMAG00000016952	POP1	100	89.879	Ursus_maritimus
ENSCANG00000001647	POP1	82	87.956	ENSVPAG00000008278	POP1	82	87.956	Vicugna_pacos
ENSCANG00000001647	POP1	100	81.934	ENSVVUG00000010994	POP1	100	81.934	Vulpes_vulpes
ENSCANG00000001647	POP1	100	43.169	ENSXCOG00000017043	POP1	100	43.416	Xiphophorus_couchianus
ENSCANG00000001647	POP1	100	47.318	ENSXMAG00000002472	POP1	100	47.318	Xiphophorus_maculatus