EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000003556 (Gene tree)
Gene ID: 105505098
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 84027 bases
Position: chrKN979641.1:6008035-6092061
Accession: 105505098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000001228	ResIII	PF04851.15	6.9e-11	1	1
ENSCANP00000001230	ResIII	PF04851.15	7.5e-11	1	1
ENSCANP00000001233	ResIII	PF04851.15	1.9e-10	1	1
ENSCANP00000001184	ResIII	PF04851.15	2.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000004776	SMARCAD1-201	5120	XM_011932805	ENSCANP00000001184	1026 (aa)	XP_011788195	A0A2K5HA05
ENSCANT00000005033	SMARCAD1-203	3018	-	ENSCANP00000001230	1005 (aa)	-	A0A2K5HA57
ENSCANT00000005031	SMARCAD1-202	3072	-	ENSCANP00000001228	1023 (aa)	-	A0A2K5HA63
ENSCANT00000005036	SMARCAD1-204	3942	XM_011932808	ENSCANP00000001233	596 (aa)	XP_011788198	A0A2K5HA67

Gene Model

Click here to download ENSCANG00000003556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000003556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000003556	SMARCAD1	84	32.827	ENSCANG00000017939	-	68	32.827
ENSCANG00000003556	SMARCAD1	87	37.294	ENSCANG00000037736	HELLS	77	37.523
ENSCANG00000003556	SMARCAD1	85	36.292	ENSCANG00000020239	CHD1L	94	30.769
ENSCANG00000003556	SMARCAD1	84	35.385	ENSCANG00000043435	CHD6	77	31.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000003556	SMARCAD1	100	100.000	ENSG00000163104	SMARCAD1	100	100.000	Homo_sapiens
ENSCANG00000003556	SMARCAD1	99	67.340	ENSAPOG00000011446	smarcad1a	66	62.343	Acanthochromis_polyacanthus
ENSCANG00000003556	SMARCAD1	100	98.993	ENSAMEG00000005844	SMARCAD1	100	96.887	Ailuropoda_melanoleuca
ENSCANG00000003556	SMARCAD1	97	67.530	ENSACIG00000018326	smarcad1a	100	68.587	Amphilophus_citrinellus
ENSCANG00000003556	SMARCAD1	99	67.340	ENSAOCG00000019762	smarcad1a	99	62.606	Amphiprion_ocellaris
ENSCANG00000003556	SMARCAD1	99	67.508	ENSAPEG00000003889	smarcad1a	55	67.508	Amphiprion_percula
ENSCANG00000003556	SMARCAD1	97	68.631	ENSATEG00000015608	smarcad1a	90	62.781	Anabas_testudineus
ENSCANG00000003556	SMARCAD1	100	84.757	ENSAPLG00000004630	SMARCAD1	100	72.364	Anas_platyrhynchos
ENSCANG00000003556	SMARCAD1	100	83.417	ENSACAG00000013554	SMARCAD1	100	70.514	Anolis_carolinensis
ENSCANG00000003556	SMARCAD1	100	99.497	ENSANAG00000020488	SMARCAD1	100	98.638	Aotus_nancymaae
ENSCANG00000003556	SMARCAD1	100	67.114	ENSACLG00000017063	smarcad1a	99	61.308	Astatotilapia_calliptera
ENSCANG00000003556	SMARCAD1	100	65.436	ENSAMXG00000015470	smarcad1a	99	60.251	Astyanax_mexicanus
ENSCANG00000003556	SMARCAD1	100	67.953	ENSAMXG00000019130	smarcad1b	85	59.900	Astyanax_mexicanus
ENSCANG00000003556	SMARCAD1	100	97.993	ENSBTAG00000017061	SMARCAD1	100	96.307	Bos_taurus
ENSCANG00000003556	SMARCAD1	96	44.597	WBGene00010845	M03C11.8	70	40.506	Caenorhabditis_elegans
ENSCANG00000003556	SMARCAD1	100	99.832	ENSCJAG00000006778	SMARCAD1	100	98.928	Callithrix_jacchus
ENSCANG00000003556	SMARCAD1	100	98.658	ENSCAFG00000010026	SMARCAD1	100	96.401	Canis_familiaris
ENSCANG00000003556	SMARCAD1	100	98.658	ENSCAFG00020003994	SMARCAD1	99	97.635	Canis_lupus_dingo
ENSCANG00000003556	SMARCAD1	100	98.826	ENSCHIG00000012905	SMARCAD1	100	96.790	Capra_hircus
ENSCANG00000003556	SMARCAD1	100	98.826	ENSTSYG00000002706	SMARCAD1	100	97.468	Carlito_syrichta
ENSCANG00000003556	SMARCAD1	97	87.348	ENSCAPG00000016744	SMARCAD1	96	78.664	Cavia_aperea
ENSCANG00000003556	SMARCAD1	100	97.987	ENSCPOG00000011398	SMARCAD1	100	94.283	Cavia_porcellus
ENSCANG00000003556	SMARCAD1	100	99.664	ENSCCAG00000022264	SMARCAD1	100	99.664	Cebus_capucinus
ENSCANG00000003556	SMARCAD1	100	100.000	ENSCATG00000035663	SMARCAD1	100	99.888	Cercocebus_atys
ENSCANG00000003556	SMARCAD1	100	100.000	ENSCSAG00000004186	SMARCAD1	100	99.881	Chlorocebus_sabaeus
ENSCANG00000003556	SMARCAD1	100	85.427	ENSCPBG00000013203	SMARCAD1	100	74.063	Chrysemys_picta_bellii
ENSCANG00000003556	SMARCAD1	100	50.415	ENSCING00000001688	-	99	49.700	Ciona_intestinalis
ENSCANG00000003556	SMARCAD1	100	97.315	ENSCGRG00001015056	Smarcad1	100	93.080	Cricetulus_griseus_chok1gshd
ENSCANG00000003556	SMARCAD1	100	97.315	ENSCGRG00000014087	Smarcad1	100	93.080	Cricetulus_griseus_crigri
ENSCANG00000003556	SMARCAD1	100	65.101	ENSCSEG00000014419	-	96	59.041	Cynoglossus_semilaevis
ENSCANG00000003556	SMARCAD1	100	65.772	ENSCSEG00000017903	smarcad1a	100	46.872	Cynoglossus_semilaevis
ENSCANG00000003556	SMARCAD1	99	65.825	ENSDARG00000014041	smarcad1a	92	55.678	Danio_rerio
ENSCANG00000003556	SMARCAD1	100	66.275	ENSDARG00000073721	smarcad1b	82	59.264	Danio_rerio
ENSCANG00000003556	SMARCAD1	100	97.987	ENSDNOG00000000806	-	100	96.101	Dasypus_novemcinctus
ENSCANG00000003556	SMARCAD1	100	97.819	ENSDORG00000012331	Smarcad1	100	93.100	Dipodomys_ordii
ENSCANG00000003556	SMARCAD1	99	46.566	FBgn0032157	Etl1	90	40.319	Drosophila_melanogaster
ENSCANG00000003556	SMARCAD1	95	48.342	ENSEBUG00000003969	smarcad1a	96	46.191	Eptatretus_burgeri
ENSCANG00000003556	SMARCAD1	100	98.826	ENSEASG00005012382	SMARCAD1	100	96.984	Equus_asinus_asinus
ENSCANG00000003556	SMARCAD1	100	98.826	ENSECAG00000011562	SMARCAD1	100	96.984	Equus_caballus
ENSCANG00000003556	SMARCAD1	98	65.812	ENSELUG00000019154	smarcad1b	79	58.824	Esox_lucius
ENSCANG00000003556	SMARCAD1	99	67.172	ENSELUG00000018535	smarcad1a	100	51.161	Esox_lucius
ENSCANG00000003556	SMARCAD1	100	98.993	ENSFCAG00000003958	SMARCAD1	100	98.993	Felis_catus
ENSCANG00000003556	SMARCAD1	100	84.087	ENSFALG00000006089	SMARCAD1	100	67.245	Ficedula_albicollis
ENSCANG00000003556	SMARCAD1	100	98.154	ENSFDAG00000017027	SMARCAD1	100	95.614	Fukomys_damarensis
ENSCANG00000003556	SMARCAD1	99	67.508	ENSFHEG00000012778	smarcad1a	65	62.343	Fundulus_heteroclitus
ENSCANG00000003556	SMARCAD1	100	66.332	ENSGMOG00000018995	smarcad1a	97	57.719	Gadus_morhua
ENSCANG00000003556	SMARCAD1	100	79.899	ENSGALG00000037339	SMARCAD1	94	74.585	Gallus_gallus
ENSCANG00000003556	SMARCAD1	99	66.835	ENSGAFG00000013498	smarcad1a	100	45.004	Gambusia_affinis
ENSCANG00000003556	SMARCAD1	99	66.891	ENSGACG00000007327	smarcad1a	99	57.937	Gasterosteus_aculeatus
ENSCANG00000003556	SMARCAD1	100	85.260	ENSGAGG00000008582	SMARCAD1	100	73.938	Gopherus_agassizii
ENSCANG00000003556	SMARCAD1	100	100.000	ENSGGOG00000023001	SMARCAD1	100	99.318	Gorilla_gorilla
ENSCANG00000003556	SMARCAD1	100	66.946	ENSHBUG00000011042	smarcad1a	99	61.172	Haplochromis_burtoni
ENSCANG00000003556	SMARCAD1	100	98.154	ENSHGLG00000005070	SMARCAD1	100	95.724	Heterocephalus_glaber_female
ENSCANG00000003556	SMARCAD1	100	98.154	ENSHGLG00100006812	SMARCAD1	100	95.724	Heterocephalus_glaber_male
ENSCANG00000003556	SMARCAD1	100	64.597	ENSHCOG00000007848	smarcad1a	98	59.167	Hippocampus_comes
ENSCANG00000003556	SMARCAD1	99	65.825	ENSIPUG00000000242	smarcad1a	68	63.393	Ictalurus_punctatus
ENSCANG00000003556	SMARCAD1	100	67.114	ENSIPUG00000022817	smarcad1b	99	52.094	Ictalurus_punctatus
ENSCANG00000003556	SMARCAD1	100	98.658	ENSSTOG00000001227	SMARCAD1	100	96.787	Ictidomys_tridecemlineatus
ENSCANG00000003556	SMARCAD1	100	98.322	ENSJJAG00000022342	Smarcad1	100	95.614	Jaculus_jaculus
ENSCANG00000003556	SMARCAD1	98	67.182	ENSKMAG00000021351	smarcad1a	65	61.473	Kryptolebias_marmoratus
ENSCANG00000003556	SMARCAD1	99	67.845	ENSLBEG00000008088	smarcad1a	63	65.672	Labrus_bergylta
ENSCANG00000003556	SMARCAD1	100	71.141	ENSLOCG00000012909	smarcad1a	100	55.245	Lepisosteus_oculatus
ENSCANG00000003556	SMARCAD1	100	95.638	ENSLAFG00000000040	SMARCAD1	100	94.444	Loxodonta_africana
ENSCANG00000003556	SMARCAD1	100	100.000	ENSMFAG00000042606	SMARCAD1	100	99.663	Macaca_fascicularis
ENSCANG00000003556	SMARCAD1	100	100.000	ENSMMUG00000022242	SMARCAD1	100	99.663	Macaca_mulatta
ENSCANG00000003556	SMARCAD1	100	99.832	ENSMNEG00000038117	SMARCAD1	100	99.832	Macaca_nemestrina
ENSCANG00000003556	SMARCAD1	100	100.000	ENSMLEG00000038333	SMARCAD1	100	100.000	Mandrillus_leucophaeus
ENSCANG00000003556	SMARCAD1	99	68.182	ENSMAMG00000000933	smarcad1a	96	63.421	Mastacembelus_armatus
ENSCANG00000003556	SMARCAD1	100	67.114	ENSMZEG00005005203	smarcad1a	100	49.589	Maylandia_zebra
ENSCANG00000003556	SMARCAD1	100	80.769	ENSMGAG00000005577	SMARCAD1	100	65.088	Meleagris_gallopavo
ENSCANG00000003556	SMARCAD1	100	97.483	ENSMAUG00000008417	Smarcad1	100	93.080	Mesocricetus_auratus
ENSCANG00000003556	SMARCAD1	100	98.829	ENSMICG00000009746	SMARCAD1	100	96.599	Microcebus_murinus
ENSCANG00000003556	SMARCAD1	100	97.148	ENSMOCG00000017142	Smarcad1	100	92.788	Microtus_ochrogaster
ENSCANG00000003556	SMARCAD1	100	67.114	ENSMMOG00000000275	smarcad1a	92	64.382	Mola_mola
ENSCANG00000003556	SMARCAD1	100	90.604	ENSMODG00000019268	SMARCAD1	100	81.660	Monodelphis_domestica
ENSCANG00000003556	SMARCAD1	100	96.477	MGP_CAROLIEiJ_G0028458	-	77	93.743	Mus_caroli
ENSCANG00000003556	SMARCAD1	100	96.477	ENSMUSG00000029920	Smarcad1	100	92.405	Mus_musculus
ENSCANG00000003556	SMARCAD1	100	96.644	MGP_PahariEiJ_G0022198	Smarcad1	100	92.697	Mus_pahari
ENSCANG00000003556	SMARCAD1	100	96.477	MGP_SPRETEiJ_G0029462	Smarcad1	100	92.405	Mus_spretus
ENSCANG00000003556	SMARCAD1	100	98.826	ENSMPUG00000002111	SMARCAD1	100	96.887	Mustela_putorius_furo
ENSCANG00000003556	SMARCAD1	100	96.823	ENSMLUG00000000425	SMARCAD1	100	93.288	Myotis_lucifugus
ENSCANG00000003556	SMARCAD1	100	97.987	ENSNGAG00000000810	Smarcad1	100	94.347	Nannospalax_galili
ENSCANG00000003556	SMARCAD1	97	67.358	ENSNBRG00000012749	smarcad1a	85	61.367	Neolamprologus_brichardi
ENSCANG00000003556	SMARCAD1	100	100.000	ENSNLEG00000014225	SMARCAD1	100	100.000	Nomascus_leucogenys
ENSCANG00000003556	SMARCAD1	100	97.987	ENSODEG00000004334	SMARCAD1	100	94.558	Octodon_degus
ENSCANG00000003556	SMARCAD1	100	66.611	ENSONIG00000015059	smarcad1a	100	52.317	Oreochromis_niloticus
ENSCANG00000003556	SMARCAD1	100	89.799	ENSOANG00000013764	SMARCAD1	100	84.662	Ornithorhynchus_anatinus
ENSCANG00000003556	SMARCAD1	100	98.490	ENSOCUG00000017283	SMARCAD1	100	96.784	Oryctolagus_cuniculus
ENSCANG00000003556	SMARCAD1	99	66.667	ENSORLG00000004869	smarcad1a	68	61.188	Oryzias_latipes
ENSCANG00000003556	SMARCAD1	99	66.667	ENSORLG00020020569	smarcad1a	68	60.996	Oryzias_latipes_hni
ENSCANG00000003556	SMARCAD1	99	66.498	ENSORLG00015009045	smarcad1a	69	61.210	Oryzias_latipes_hsok
ENSCANG00000003556	SMARCAD1	99	66.498	ENSOMEG00000023032	smarcad1a	69	60.768	Oryzias_melastigma
ENSCANG00000003556	SMARCAD1	100	97.492	ENSOGAG00000011444	SMARCAD1	100	96.599	Otolemur_garnettii
ENSCANG00000003556	SMARCAD1	100	98.826	ENSOARG00000017851	SMARCAD1	100	96.887	Ovis_aries
ENSCANG00000003556	SMARCAD1	100	100.000	ENSPPAG00000035715	SMARCAD1	100	99.220	Pan_paniscus
ENSCANG00000003556	SMARCAD1	100	98.993	ENSPPRG00000024756	SMARCAD1	100	98.993	Panthera_pardus
ENSCANG00000003556	SMARCAD1	100	98.662	ENSPTIG00000017868	SMARCAD1	100	96.501	Panthera_tigris_altaica
ENSCANG00000003556	SMARCAD1	100	100.000	ENSPTRG00000023126	SMARCAD1	100	100.000	Pan_troglodytes
ENSCANG00000003556	SMARCAD1	100	98.348	ENSPANG00000019757	SMARCAD1	100	98.348	Papio_anubis
ENSCANG00000003556	SMARCAD1	100	84.422	ENSPSIG00000010255	SMARCAD1	100	73.110	Pelodiscus_sinensis
ENSCANG00000003556	SMARCAD1	99	64.874	ENSPMGG00000010735	smarcad1a	95	63.018	Periophthalmus_magnuspinnatus
ENSCANG00000003556	SMARCAD1	100	83.221	ENSPEMG00000001854	Smarcad1	100	79.045	Peromyscus_maniculatus_bairdii
ENSCANG00000003556	SMARCAD1	99	59.701	ENSPMAG00000003516	smarcad1a	99	46.952	Petromyzon_marinus
ENSCANG00000003556	SMARCAD1	100	90.604	ENSPCIG00000008137	SMARCAD1	98	88.599	Phascolarctos_cinereus
ENSCANG00000003556	SMARCAD1	99	67.003	ENSPFOG00000019116	smarcad1a	64	62.291	Poecilia_formosa
ENSCANG00000003556	SMARCAD1	99	66.835	ENSPLAG00000000108	smarcad1a	64	62.151	Poecilia_latipinna
ENSCANG00000003556	SMARCAD1	99	67.003	ENSPMEG00000009155	smarcad1a	64	62.291	Poecilia_mexicana
ENSCANG00000003556	SMARCAD1	99	67.508	ENSPREG00000018185	smarcad1a	94	62.448	Poecilia_reticulata
ENSCANG00000003556	SMARCAD1	100	98.997	ENSPPYG00000014935	SMARCAD1	100	98.541	Pongo_abelii
ENSCANG00000003556	SMARCAD1	81	98.750	ENSPCOG00000020478	SMARCAD1	89	97.236	Propithecus_coquereli
ENSCANG00000003556	SMARCAD1	100	96.321	ENSPVAG00000001760	SMARCAD1	100	95.141	Pteropus_vampyrus
ENSCANG00000003556	SMARCAD1	97	67.128	ENSPNYG00000010087	smarcad1a	86	60.948	Pundamilia_nyererei
ENSCANG00000003556	SMARCAD1	100	68.121	ENSPNAG00000010099	smarcad1b	99	52.414	Pygocentrus_nattereri
ENSCANG00000003556	SMARCAD1	99	66.667	ENSPNAG00000001663	smarcad1a	100	49.954	Pygocentrus_nattereri
ENSCANG00000003556	SMARCAD1	100	96.812	ENSRNOG00000006391	Smarcad1	100	93.379	Rattus_norvegicus
ENSCANG00000003556	SMARCAD1	100	100.000	ENSRBIG00000041989	SMARCAD1	100	99.610	Rhinopithecus_bieti
ENSCANG00000003556	SMARCAD1	100	100.000	ENSRROG00000035309	SMARCAD1	100	99.610	Rhinopithecus_roxellana
ENSCANG00000003556	SMARCAD1	100	99.664	ENSSBOG00000032114	SMARCAD1	100	99.664	Saimiri_boliviensis_boliviensis
ENSCANG00000003556	SMARCAD1	100	91.107	ENSSHAG00000001279	SMARCAD1	100	82.336	Sarcophilus_harrisii
ENSCANG00000003556	SMARCAD1	99	64.706	ENSSFOG00015020909	smarcad1a	100	57.772	Scleropages_formosus
ENSCANG00000003556	SMARCAD1	99	68.013	ENSSFOG00015016814	smarcad1b	100	50.417	Scleropages_formosus
ENSCANG00000003556	SMARCAD1	99	68.182	ENSSMAG00000001326	smarcad1a	67	62.380	Scophthalmus_maximus
ENSCANG00000003556	SMARCAD1	99	67.340	ENSSDUG00000022338	smarcad1a	84	62.185	Seriola_dumerili
ENSCANG00000003556	SMARCAD1	99	67.003	ENSSLDG00000024986	smarcad1a	67	61.357	Seriola_lalandi_dorsalis
ENSCANG00000003556	SMARCAD1	100	84.590	ENSSPUG00000004633	SMARCAD1	100	84.590	Sphenodon_punctatus
ENSCANG00000003556	SMARCAD1	99	67.508	ENSSPAG00000001970	smarcad1a	96	62.291	Stegastes_partitus
ENSCANG00000003556	SMARCAD1	100	98.826	ENSSSCG00000009193	SMARCAD1	100	97.860	Sus_scrofa
ENSCANG00000003556	SMARCAD1	100	85.092	ENSTGUG00000003127	SMARCAD1	100	78.061	Taeniopygia_guttata
ENSCANG00000003556	SMARCAD1	99	68.067	ENSTNIG00000017585	smarcad1a	99	57.780	Tetraodon_nigroviridis
ENSCANG00000003556	SMARCAD1	91	97.817	ENSTBEG00000002789	SMARCAD1	91	97.817	Tupaia_belangeri
ENSCANG00000003556	SMARCAD1	100	98.660	ENSTTRG00000000226	SMARCAD1	100	95.631	Tursiops_truncatus
ENSCANG00000003556	SMARCAD1	100	99.161	ENSUAMG00000022262	SMARCAD1	99	98.236	Ursus_americanus
ENSCANG00000003556	SMARCAD1	100	99.161	ENSUMAG00000004549	SMARCAD1	100	97.079	Ursus_maritimus
ENSCANG00000003556	SMARCAD1	100	98.490	ENSVVUG00000007271	SMARCAD1	100	97.384	Vulpes_vulpes
ENSCANG00000003556	SMARCAD1	100	73.244	ENSXETG00000019214	smarcad1	100	65.643	Xenopus_tropicalis
ENSCANG00000003556	SMARCAD1	99	65.878	ENSXCOG00000005232	smarcad1a	94	54.026	Xiphophorus_couchianus
ENSCANG00000003556	SMARCAD1	99	66.667	ENSXMAG00000015350	smarcad1a	64	61.678	Xiphophorus_maculatus