EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000004769 (Gene tree)
Gene ID: 105510473
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 40891 bases
Position: chrKN980373.1:272556-313446
Accession: 105510473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000001453	YTH	PF04146.15	8.9e-40	1	1
ENSCANP00000001432	YTH	PF04146.15	1.4e-39	1	1
ENSCANP00000001431	YTH	PF04146.15	1.5e-39	1	1
ENSCANP00000001446	YTH	PF04146.15	1.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000005912	YTHDC1-204	1623	-	ENSCANP00000001453	540 (aa)	-	A0A2K5HAS6
ENSCANT00000005806	YTHDC1-202	6182	XM_011940271	ENSCANP00000001432	710 (aa)	XP_011795661	A0A2K5HAS0
ENSCANT00000005760	YTHDC1-201	6236	XM_011940270	ENSCANP00000001431	728 (aa)	XP_011795660	A0A2K5HAR5
ENSCANT00000005905	YTHDC1-203	2196	-	ENSCANP00000001446	731 (aa)	-	A0A2K5HAT3

Gene Model

Click here to download ENSCANG00000004769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000004769's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000004769	YTHDC1	100	99.725	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSCANG00000004769	YTHDC1	58	59.338	ENSAPOG00000013997	ythdc1	57	62.768	Acanthochromis_polyacanthus
ENSCANG00000004769	YTHDC1	100	97.674	ENSAMEG00000005688	YTHDC1	100	97.674	Ailuropoda_melanoleuca
ENSCANG00000004769	YTHDC1	64	69.531	ENSACIG00000019728	ythdc1	80	60.048	Amphilophus_citrinellus
ENSCANG00000004769	YTHDC1	57	61.468	ENSAOCG00000000239	ythdc1	59	67.703	Amphiprion_ocellaris
ENSCANG00000004769	YTHDC1	50	64.420	ENSAPEG00000000618	ythdc1	53	68.946	Amphiprion_percula
ENSCANG00000004769	YTHDC1	96	82.692	ENSAPLG00000009921	YTHDC1	92	85.587	Anas_platyrhynchos
ENSCANG00000004769	YTHDC1	96	81.418	ENSACAG00000009697	YTHDC1	93	83.556	Anolis_carolinensis
ENSCANG00000004769	YTHDC1	100	99.313	ENSANAG00000001522	YTHDC1	100	99.313	Aotus_nancymaae
ENSCANG00000004769	YTHDC1	92	53.411	ENSACLG00000019371	ythdc1	59	66.362	Astatotilapia_calliptera
ENSCANG00000004769	YTHDC1	96	61.842	ENSAMXG00000006978	ythdc1	92	65.896	Astyanax_mexicanus
ENSCANG00000004769	YTHDC1	100	97.531	ENSBTAG00000015572	YTHDC1	100	97.531	Bos_taurus
ENSCANG00000004769	YTHDC1	100	99.725	ENSCJAG00000009934	YTHDC1	100	99.725	Callithrix_jacchus
ENSCANG00000004769	YTHDC1	100	97.674	ENSCAFG00000002821	YTHDC1	100	97.674	Canis_familiaris
ENSCANG00000004769	YTHDC1	100	97.674	ENSCAFG00020027112	YTHDC1	100	97.674	Canis_lupus_dingo
ENSCANG00000004769	YTHDC1	99	95.896	ENSCHIG00000004810	YTHDC1	98	95.896	Capra_hircus
ENSCANG00000004769	YTHDC1	100	99.038	ENSTSYG00000011668	YTHDC1	100	99.038	Carlito_syrichta
ENSCANG00000004769	YTHDC1	98	72.233	ENSCAPG00000008722	YTHDC1	90	69.243	Cavia_aperea
ENSCANG00000004769	YTHDC1	96	96.381	ENSCPOG00000010929	YTHDC1	100	91.209	Cavia_porcellus
ENSCANG00000004769	YTHDC1	100	99.451	ENSCCAG00000035754	YTHDC1	100	99.451	Cebus_capucinus
ENSCANG00000004769	YTHDC1	100	99.859	ENSCATG00000036320	YTHDC1	100	99.859	Cercocebus_atys
ENSCANG00000004769	YTHDC1	99	97.796	ENSCLAG00000005482	YTHDC1	99	97.796	Chinchilla_lanigera
ENSCANG00000004769	YTHDC1	100	99.863	ENSCSAG00000005252	YTHDC1	100	99.863	Chlorocebus_sabaeus
ENSCANG00000004769	YTHDC1	97	84.762	ENSCPBG00000021965	YTHDC1	94	87.211	Chrysemys_picta_bellii
ENSCANG00000004769	YTHDC1	100	97.324	ENSCGRG00001000816	Ythdc1	100	97.324	Cricetulus_griseus_chok1gshd
ENSCANG00000004769	YTHDC1	99	97.357	ENSCGRG00000009807	Ythdc1	99	97.357	Cricetulus_griseus_crigri
ENSCANG00000004769	YTHDC1	57	60.352	ENSCSEG00000020404	ythdc1	59	66.906	Cynoglossus_semilaevis
ENSCANG00000004769	YTHDC1	50	67.518	ENSCVAG00000022349	ythdc1	59	65.783	Cyprinodon_variegatus
ENSCANG00000004769	YTHDC1	93	63.557	ENSDARG00000051953	ythdc1	58	78.378	Danio_rerio
ENSCANG00000004769	YTHDC1	100	96.845	ENSDNOG00000004949	YTHDC1	100	96.845	Dasypus_novemcinctus
ENSCANG00000004769	YTHDC1	99	98.624	ENSDORG00000013045	Ythdc1	100	98.609	Dipodomys_ordii
ENSCANG00000004769	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	77	100.000	Echinops_telfairi
ENSCANG00000004769	YTHDC1	100	98.222	ENSEASG00005018383	YTHDC1	100	98.222	Equus_asinus_asinus
ENSCANG00000004769	YTHDC1	100	97.811	ENSECAG00000018303	YTHDC1	100	97.811	Equus_caballus
ENSCANG00000004769	YTHDC1	100	96.845	ENSEEUG00000015466	YTHDC1	100	96.845	Erinaceus_europaeus
ENSCANG00000004769	YTHDC1	95	60.456	ENSELUG00000014029	ythdc1	57	77.179	Esox_lucius
ENSCANG00000004769	YTHDC1	100	97.534	ENSFCAG00000026791	YTHDC1	100	97.534	Felis_catus
ENSCANG00000004769	YTHDC1	68	89.679	ENSFALG00000006581	YTHDC1	87	93.917	Ficedula_albicollis
ENSCANG00000004769	YTHDC1	99	97.772	ENSFDAG00000018560	YTHDC1	100	97.772	Fukomys_damarensis
ENSCANG00000004769	YTHDC1	65	66.667	ENSFHEG00000001286	ythdc1	60	56.325	Fundulus_heteroclitus
ENSCANG00000004769	YTHDC1	63	64.184	ENSGMOG00000018815	ythdc1	78	64.184	Gadus_morhua
ENSCANG00000004769	YTHDC1	99	84.515	ENSGALG00000035906	YTHDC1	90	84.701	Gallus_gallus
ENSCANG00000004769	YTHDC1	70	65.052	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSCANG00000004769	YTHDC1	58	62.326	ENSGACG00000015486	ythdc1	57	62.774	Gasterosteus_aculeatus
ENSCANG00000004769	YTHDC1	96	85.385	ENSGAGG00000007108	YTHDC1	93	85.505	Gopherus_agassizii
ENSCANG00000004769	YTHDC1	100	99.859	ENSGGOG00000021958	YTHDC1	100	99.859	Gorilla_gorilla
ENSCANG00000004769	YTHDC1	92	53.606	ENSHBUG00000019288	ythdc1	59	66.362	Haplochromis_burtoni
ENSCANG00000004769	YTHDC1	100	97.465	ENSHGLG00000006319	-	100	97.465	Heterocephalus_glaber_female
ENSCANG00000004769	YTHDC1	96	71.869	ENSHGLG00000003239	-	68	73.410	Heterocephalus_glaber_female
ENSCANG00000004769	YTHDC1	100	96.585	ENSHGLG00100001556	-	100	96.585	Heterocephalus_glaber_male
ENSCANG00000004769	YTHDC1	96	69.923	ENSHGLG00100008060	-	68	71.456	Heterocephalus_glaber_male
ENSCANG00000004769	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSCANG00000004769	YTHDC1	93	67.442	ENSIPUG00000018136	ythdc1	61	83.759	Ictalurus_punctatus
ENSCANG00000004769	YTHDC1	100	98.098	ENSSTOG00000013652	YTHDC1	100	98.098	Ictidomys_tridecemlineatus
ENSCANG00000004769	YTHDC1	96	93.269	ENSJJAG00000010268	Ythdc1	93	93.165	Jaculus_jaculus
ENSCANG00000004769	YTHDC1	57	60.502	ENSKMAG00000006483	ythdc1	85	65.533	Kryptolebias_marmoratus
ENSCANG00000004769	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSCANG00000004769	YTHDC1	90	71.053	ENSLACG00000004893	YTHDC1	92	73.906	Latimeria_chalumnae
ENSCANG00000004769	YTHDC1	93	73.560	ENSLOCG00000003045	ythdc1	92	88.702	Lepisosteus_oculatus
ENSCANG00000004769	YTHDC1	100	95.924	ENSLAFG00000021592	YTHDC1	100	95.924	Loxodonta_africana
ENSCANG00000004769	YTHDC1	100	100.000	ENSMFAG00000031927	YTHDC1	100	100.000	Macaca_fascicularis
ENSCANG00000004769	YTHDC1	100	100.000	ENSMMUG00000002265	YTHDC1	100	100.000	Macaca_mulatta
ENSCANG00000004769	YTHDC1	100	100.000	ENSMNEG00000033751	YTHDC1	100	100.000	Macaca_nemestrina
ENSCANG00000004769	YTHDC1	100	100.000	ENSMLEG00000042147	YTHDC1	100	100.000	Mandrillus_leucophaeus
ENSCANG00000004769	YTHDC1	55	61.871	ENSMAMG00000013122	ythdc1	58	66.826	Mastacembelus_armatus
ENSCANG00000004769	YTHDC1	92	53.411	ENSMZEG00005023173	ythdc1	59	66.362	Maylandia_zebra
ENSCANG00000004769	YTHDC1	93	84.444	ENSMGAG00000010391	YTHDC1	91	84.866	Meleagris_gallopavo
ENSCANG00000004769	YTHDC1	100	97.042	ENSMAUG00000001286	Ythdc1	100	97.042	Mesocricetus_auratus
ENSCANG00000004769	YTHDC1	100	97.286	ENSMICG00000034640	YTHDC1	100	97.286	Microcebus_murinus
ENSCANG00000004769	YTHDC1	100	97.324	ENSMOCG00000020201	Ythdc1	100	97.324	Microtus_ochrogaster
ENSCANG00000004769	YTHDC1	96	51.783	ENSMODG00000010076	-	72	52.465	Monodelphis_domestica
ENSCANG00000004769	YTHDC1	85	73.818	ENSMODG00000014337	-	95	69.830	Monodelphis_domestica
ENSCANG00000004769	YTHDC1	65	56.904	ENSMODG00000009173	-	88	61.594	Monodelphis_domestica
ENSCANG00000004769	YTHDC1	96	87.500	ENSMODG00000020754	-	92	88.724	Monodelphis_domestica
ENSCANG00000004769	YTHDC1	57	69.388	ENSMALG00000013412	ythdc1	56	69.054	Monopterus_albus
ENSCANG00000004769	YTHDC1	99	93.542	MGP_CAROLIEiJ_G0027347	Ythdc1	97	92.870	Mus_caroli
ENSCANG00000004769	YTHDC1	100	97.119	ENSMUSG00000035851	Ythdc1	100	97.119	Mus_musculus
ENSCANG00000004769	YTHDC1	100	97.394	MGP_PahariEiJ_G0017126	Ythdc1	100	97.394	Mus_pahari
ENSCANG00000004769	YTHDC1	100	97.394	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.394	Mus_spretus
ENSCANG00000004769	YTHDC1	93	73.167	ENSMPUG00000001743	YTHDC1	53	98.695	Mustela_putorius_furo
ENSCANG00000004769	YTHDC1	99	97.354	ENSMLUG00000016300	YTHDC1	100	97.354	Myotis_lucifugus
ENSCANG00000004769	YTHDC1	81	88.036	ENSNGAG00000024000	Ythdc1	93	96.682	Nannospalax_galili
ENSCANG00000004769	YTHDC1	60	63.889	ENSNBRG00000007663	ythdc1	70	66.589	Neolamprologus_brichardi
ENSCANG00000004769	YTHDC1	100	99.179	ENSNLEG00000009202	YTHDC1	100	99.179	Nomascus_leucogenys
ENSCANG00000004769	YTHDC1	82	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSCANG00000004769	YTHDC1	75	98.867	ENSOPRG00000008986	YTHDC1	74	98.867	Ochotona_princeps
ENSCANG00000004769	YTHDC1	100	97.253	ENSODEG00000001715	YTHDC1	100	97.253	Octodon_degus
ENSCANG00000004769	YTHDC1	92	53.801	ENSONIG00000012651	ythdc1	59	66.819	Oreochromis_niloticus
ENSCANG00000004769	YTHDC1	89	77.217	ENSOANG00000014398	YTHDC1	55	97.468	Ornithorhynchus_anatinus
ENSCANG00000004769	YTHDC1	93	81.979	ENSOCUG00000015886	YTHDC1	57	95.729	Oryctolagus_cuniculus
ENSCANG00000004769	YTHDC1	56	61.111	ENSORLG00000030544	ythdc1	60	66.988	Oryzias_latipes
ENSCANG00000004769	YTHDC1	56	60.386	ENSORLG00020019316	ythdc1	60	66.988	Oryzias_latipes_hni
ENSCANG00000004769	YTHDC1	56	61.520	ENSOMEG00000000551	ythdc1	72	53.631	Oryzias_melastigma
ENSCANG00000004769	YTHDC1	100	97.802	ENSOGAG00000003362	YTHDC1	100	97.802	Otolemur_garnettii
ENSCANG00000004769	YTHDC1	100	97.531	ENSOARG00000008633	YTHDC1	100	97.531	Ovis_aries
ENSCANG00000004769	YTHDC1	100	99.718	ENSPPAG00000041315	YTHDC1	100	99.718	Pan_paniscus
ENSCANG00000004769	YTHDC1	100	97.612	ENSPPRG00000011979	YTHDC1	100	97.612	Panthera_pardus
ENSCANG00000004769	YTHDC1	99	97.390	ENSPTIG00000015527	YTHDC1	100	97.390	Panthera_tigris_altaica
ENSCANG00000004769	YTHDC1	100	99.718	ENSPTRG00000016105	YTHDC1	100	99.718	Pan_troglodytes
ENSCANG00000004769	YTHDC1	100	99.859	ENSPANG00000021590	YTHDC1	100	99.859	Papio_anubis
ENSCANG00000004769	YTHDC1	96	67.176	ENSPKIG00000018497	ythdc1	93	68.940	Paramormyrops_kingsleyae
ENSCANG00000004769	YTHDC1	96	85.029	ENSPSIG00000002782	YTHDC1	92	86.937	Pelodiscus_sinensis
ENSCANG00000004769	YTHDC1	55	56.667	ENSPMGG00000000970	-	72	64.808	Periophthalmus_magnuspinnatus
ENSCANG00000004769	YTHDC1	99	97.662	ENSPEMG00000013850	Ythdc1	100	97.632	Peromyscus_maniculatus_bairdii
ENSCANG00000004769	YTHDC1	96	87.308	ENSPCIG00000006870	YTHDC1	92	88.576	Phascolarctos_cinereus
ENSCANG00000004769	YTHDC1	50	65.693	ENSPFOG00000013404	ythdc1	60	65.625	Poecilia_formosa
ENSCANG00000004769	YTHDC1	57	59.545	ENSPLAG00000011079	ythdc1	85	65.625	Poecilia_latipinna
ENSCANG00000004769	YTHDC1	50	65.693	ENSPMEG00000009238	ythdc1	60	65.625	Poecilia_mexicana
ENSCANG00000004769	YTHDC1	67	63.370	ENSPREG00000016973	ythdc1	76	51.331	Poecilia_reticulata
ENSCANG00000004769	YTHDC1	87	99.684	ENSPPYG00000014726	YTHDC1	100	99.684	Pongo_abelii
ENSCANG00000004769	YTHDC1	76	100.000	ENSPCAG00000009607	YTHDC1	77	93.586	Procavia_capensis
ENSCANG00000004769	YTHDC1	100	93.671	ENSPCOG00000019105	YTHDC1	100	93.671	Propithecus_coquereli
ENSCANG00000004769	YTHDC1	96	89.603	ENSPVAG00000015551	YTHDC1	93	92.910	Pteropus_vampyrus
ENSCANG00000004769	YTHDC1	92	53.411	ENSPNYG00000011687	ythdc1	59	66.362	Pundamilia_nyererei
ENSCANG00000004769	YTHDC1	96	68.121	ENSPNAG00000028365	ythdc1	93	69.509	Pygocentrus_nattereri
ENSCANG00000004769	YTHDC1	100	95.399	ENSRNOG00000001996	Ythdc1	100	95.399	Rattus_norvegicus
ENSCANG00000004769	YTHDC1	100	98.906	ENSRBIG00000028279	YTHDC1	100	98.906	Rhinopithecus_bieti
ENSCANG00000004769	YTHDC1	100	100.000	ENSRROG00000035028	YTHDC1	100	100.000	Rhinopithecus_roxellana
ENSCANG00000004769	YTHDC1	100	99.718	ENSSBOG00000022353	YTHDC1	100	99.718	Saimiri_boliviensis_boliviensis
ENSCANG00000004769	YTHDC1	96	87.500	ENSSHAG00000002538	YTHDC1	91	88.571	Sarcophilus_harrisii
ENSCANG00000004769	YTHDC1	96	66.793	ENSSFOG00015003298	ythdc1	60	86.019	Scleropages_formosus
ENSCANG00000004769	YTHDC1	56	60.314	ENSSMAG00000009086	ythdc1	60	65.947	Scophthalmus_maximus
ENSCANG00000004769	YTHDC1	55	61.017	ENSSDUG00000022008	ythdc1	59	67.277	Seriola_dumerili
ENSCANG00000004769	YTHDC1	55	61.017	ENSSLDG00000007926	ythdc1	59	67.277	Seriola_lalandi_dorsalis
ENSCANG00000004769	YTHDC1	79	98.616	ENSSARG00000010960	YTHDC1	100	98.616	Sorex_araneus
ENSCANG00000004769	YTHDC1	93	82.891	ENSSPUG00000009357	YTHDC1	91	83.013	Sphenodon_punctatus
ENSCANG00000004769	YTHDC1	58	61.261	ENSSPAG00000011449	ythdc1	59	67.703	Stegastes_partitus
ENSCANG00000004769	YTHDC1	99	96.957	ENSSSCG00000035505	YTHDC1	100	96.812	Sus_scrofa
ENSCANG00000004769	YTHDC1	96	84.069	ENSTGUG00000004452	-	92	85.926	Taeniopygia_guttata
ENSCANG00000004769	YTHDC1	63	67.500	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSCANG00000004769	YTHDC1	90	62.069	ENSTNIG00000013243	ythdc1	89	66.279	Tetraodon_nigroviridis
ENSCANG00000004769	YTHDC1	96	85.271	ENSTBEG00000011546	YTHDC1	92	87.834	Tupaia_belangeri
ENSCANG00000004769	YTHDC1	100	96.717	ENSTTRG00000005083	YTHDC1	100	96.717	Tursiops_truncatus
ENSCANG00000004769	YTHDC1	93	97.644	ENSUAMG00000010388	YTHDC1	100	97.644	Ursus_americanus
ENSCANG00000004769	YTHDC1	99	84.006	ENSUMAG00000013668	YTHDC1	98	84.006	Ursus_maritimus
ENSCANG00000004769	YTHDC1	100	97.887	ENSVPAG00000009040	YTHDC1	100	97.887	Vicugna_pacos
ENSCANG00000004769	YTHDC1	99	97.534	ENSVVUG00000005387	YTHDC1	100	97.500	Vulpes_vulpes
ENSCANG00000004769	YTHDC1	97	70.019	ENSXETG00000017960	ythdc1	91	72.546	Xenopus_tropicalis
ENSCANG00000004769	YTHDC1	71	50.000	ENSXCOG00000000530	ythdc1	87	51.361	Xiphophorus_couchianus
ENSCANG00000004769	YTHDC1	58	58.482	ENSXMAG00000005196	ythdc1	61	65.138	Xiphophorus_maculatus