EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000004774 (Gene tree)
Gene ID: 105512946
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 53220 bases
Position: chrKN980718.1:2905683-2958902
Accession: 105512946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000001422	RRM_5	PF13893.6	4.5e-07	1	1
ENSCANP00000001417	RRM_5	PF13893.6	4.8e-07	1	1
ENSCANP00000001422	RRM_1	PF00076.22	4.1e-13	1	1
ENSCANP00000001417	RRM_1	PF00076.22	4.3e-13	1	1
ENSCANP00000001428	SAP	PF02037.27	1.1e-10	1	1
ENSCANP00000001422	SAP	PF02037.27	1.1e-09	1	1
ENSCANP00000001417	SAP	PF02037.27	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000005720	-	2463	XM_011943620	ENSCANP00000001417	820 (aa)	XP_011799010	A0A2K5HAQ8
ENSCANT00000005743	-	321	-	ENSCANP00000001428	106 (aa)	-	A0A2K5HAP8
ENSCANT00000005733	-	2256	-	ENSCANP00000001422	751 (aa)	-	A0A2K5HAR0

Gene Model

Click here to download ENSCANG00000004774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000004774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000004774	-	99	72.419	ENSCANG00000024675	SAFB2	98	58.632
ENSCANG00000004774	-	86	96.703	ENSCANG00000019754	-	100	82.671

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000004774	-	100	100.000	ENSG00000160633	SAFB	100	100.000	Homo_sapiens
ENSCANG00000004774	-	90	44.224	ENSAPOG00000022508	safb	83	43.514	Acanthochromis_polyacanthus
ENSCANG00000004774	-	100	95.025	ENSAMEG00000012254	SAFB	94	95.025	Ailuropoda_melanoleuca
ENSCANG00000004774	-	74	54.217	ENSACIG00000006247	safb	96	38.471	Amphilophus_citrinellus
ENSCANG00000004774	-	91	43.060	ENSAOCG00000006308	safb	98	38.471	Amphiprion_ocellaris
ENSCANG00000004774	-	89	43.950	ENSAPEG00000023342	safb	83	43.186	Amphiprion_percula
ENSCANG00000004774	-	65	63.014	ENSATEG00000004998	safb	64	41.887	Anabas_testudineus
ENSCANG00000004774	-	67	63.082	ENSAPLG00000005780	-	89	65.196	Anas_platyrhynchos
ENSCANG00000004774	-	87	72.941	ENSAPLG00000006355	-	95	72.941	Anas_platyrhynchos
ENSCANG00000004774	-	100	98.229	ENSANAG00000028821	SAFB	100	86.232	Aotus_nancymaae
ENSCANG00000004774	-	93	43.534	ENSACLG00000001926	safb	79	42.754	Astatotilapia_calliptera
ENSCANG00000004774	-	85	57.447	ENSAMXG00000018154	safb	68	41.654	Astyanax_mexicanus
ENSCANG00000004774	-	88	92.473	ENSBTAG00000051794	-	91	90.164	Bos_taurus
ENSCANG00000004774	-	100	90.982	ENSBTAG00000007875	SAFB	96	86.078	Bos_taurus
ENSCANG00000004774	-	88	97.849	ENSCJAG00000017081	SAFB	100	98.585	Callithrix_jacchus
ENSCANG00000004774	-	100	94.527	ENSCAFG00000018803	SAFB	83	94.527	Canis_familiaris
ENSCANG00000004774	-	100	94.527	ENSCAFG00020018943	SAFB	95	94.527	Canis_lupus_dingo
ENSCANG00000004774	-	100	88.889	ENSCHIG00000007262	SAFB	98	92.453	Capra_hircus
ENSCANG00000004774	-	58	85.985	ENSTSYG00000001851	-	86	85.985	Carlito_syrichta
ENSCANG00000004774	-	92	81.384	ENSCAPG00000012121	SAFB	100	81.258	Cavia_aperea
ENSCANG00000004774	-	100	85.714	ENSCPOG00000026322	SAFB	98	83.636	Cavia_porcellus
ENSCANG00000004774	-	100	98.392	ENSCCAG00000020193	SAFB	100	85.387	Cebus_capucinus
ENSCANG00000004774	-	100	99.517	ENSCATG00000029994	SAFB	100	86.572	Cercocebus_atys
ENSCANG00000004774	-	99	92.537	ENSCLAG00000007734	SAFB	95	92.537	Chinchilla_lanigera
ENSCANG00000004774	-	100	99.356	ENSCSAG00000009949	SAFB	100	86.463	Chlorocebus_sabaeus
ENSCANG00000004774	-	84	97.917	ENSCHOG00000003208	SAFB	86	98.000	Choloepus_hoffmanni
ENSCANG00000004774	-	89	62.745	ENSCPBG00000010936	-	94	62.745	Chrysemys_picta_bellii
ENSCANG00000004774	-	89	67.805	ENSCPBG00000010928	-	87	65.686	Chrysemys_picta_bellii
ENSCANG00000004774	-	99	92.040	ENSCGRG00001002254	Safb	100	92.040	Cricetulus_griseus_chok1gshd
ENSCANG00000004774	-	88	92.040	ENSCGRG00000011529	Safb	92	92.040	Cricetulus_griseus_crigri
ENSCANG00000004774	-	92	36.788	ENSCSEG00000019870	safb	95	38.015	Cynoglossus_semilaevis
ENSCANG00000004774	-	93	34.881	ENSCVAG00000002226	safb	94	35.751	Cyprinodon_variegatus
ENSCANG00000004774	-	93	42.246	ENSDARG00000020467	safb	87	43.987	Danio_rerio
ENSCANG00000004774	-	100	92.765	ENSDNOG00000015746	SAFB	89	85.024	Dasypus_novemcinctus
ENSCANG00000004774	-	99	90.863	ENSDORG00000016200	Safb	97	83.384	Dipodomys_ordii
ENSCANG00000004774	-	81	85.000	ENSETEG00000018679	SAFB	81	85.000	Echinops_telfairi
ENSCANG00000004774	-	100	88.479	ENSEASG00005023019	SAFB	97	88.636	Equus_asinus_asinus
ENSCANG00000004774	-	100	89.935	ENSECAG00000018659	SAFB	87	88.128	Equus_caballus
ENSCANG00000004774	-	83	54.444	ENSELUG00000022327	safb	77	55.000	Esox_lucius
ENSCANG00000004774	-	100	95.025	ENSFCAG00000011835	SAFB	95	95.025	Felis_catus
ENSCANG00000004774	-	99	66.341	ENSFALG00000013882	-	79	65.049	Ficedula_albicollis
ENSCANG00000004774	-	89	63.235	ENSFALG00000013881	-	95	63.462	Ficedula_albicollis
ENSCANG00000004774	-	100	85.936	ENSFDAG00000020306	SAFB	100	85.340	Fukomys_damarensis
ENSCANG00000004774	-	92	39.205	ENSFHEG00000004219	safb	94	36.842	Fundulus_heteroclitus
ENSCANG00000004774	-	73	57.692	ENSGMOG00000014280	safb	80	41.279	Gadus_morhua
ENSCANG00000004774	-	99	66.176	ENSGALG00000001948	-	93	66.176	Gallus_gallus
ENSCANG00000004774	-	99	67.805	ENSGALG00000013365	-	86	66.176	Gallus_gallus
ENSCANG00000004774	-	92	39.572	ENSGAFG00000016162	safb	95	35.183	Gambusia_affinis
ENSCANG00000004774	-	61	63.768	ENSGACG00000011385	safb	81	41.340	Gasterosteus_aculeatus
ENSCANG00000004774	-	94	63.830	ENSGAGG00000008424	-	92	68.519	Gopherus_agassizii
ENSCANG00000004774	-	100	100.000	ENSGGOG00000015109	SAFB	100	100.000	Gorilla_gorilla
ENSCANG00000004774	-	60	60.870	ENSHBUG00000009218	safb	97	38.452	Haplochromis_burtoni
ENSCANG00000004774	-	99	92.040	ENSHGLG00000015883	SAFB	95	92.040	Heterocephalus_glaber_female
ENSCANG00000004774	-	100	88.602	ENSHGLG00100004228	SAFB	100	88.719	Heterocephalus_glaber_male
ENSCANG00000004774	-	67	37.722	ENSHCOG00000001705	safb	96	34.149	Hippocampus_comes
ENSCANG00000004774	-	86	60.000	ENSIPUG00000024869	safb2	63	45.406	Ictalurus_punctatus
ENSCANG00000004774	-	91	94.527	ENSSTOG00000002783	SAFB	95	94.527	Ictidomys_tridecemlineatus
ENSCANG00000004774	-	99	94.030	ENSJJAG00000009021	Safb	96	94.030	Jaculus_jaculus
ENSCANG00000004774	-	85	49.612	ENSKMAG00000022308	safb	86	43.605	Kryptolebias_marmoratus
ENSCANG00000004774	-	63	65.217	ENSLBEG00000006015	safb	67	43.458	Labrus_bergylta
ENSCANG00000004774	-	96	53.485	ENSLACG00000018090	SAFB	88	53.917	Latimeria_chalumnae
ENSCANG00000004774	-	95	50.254	ENSLOCG00000003613	safb	83	51.744	Lepisosteus_oculatus
ENSCANG00000004774	-	99	91.710	ENSLAFG00000003840	SAFB	95	84.783	Loxodonta_africana
ENSCANG00000004774	-	100	99.357	ENSMFAG00000003885	SAFB	100	99.057	Macaca_fascicularis
ENSCANG00000004774	-	100	99.517	ENSMMUG00000017970	SAFB	100	99.057	Macaca_mulatta
ENSCANG00000004774	-	100	99.057	ENSMNEG00000035637	SAFB	100	99.057	Macaca_nemestrina
ENSCANG00000004774	-	100	99.057	ENSMLEG00000038637	SAFB	100	99.057	Mandrillus_leucophaeus
ENSCANG00000004774	-	65	58.904	ENSMAMG00000003357	safb	74	45.930	Mastacembelus_armatus
ENSCANG00000004774	-	93	44.205	ENSMZEG00005009120	safb	83	43.678	Maylandia_zebra
ENSCANG00000004774	-	71	60.477	ENSMGAG00000001101	-	89	66.176	Meleagris_gallopavo
ENSCANG00000004774	-	86	75.000	ENSMGAG00000001051	-	97	75.000	Meleagris_gallopavo
ENSCANG00000004774	-	51	92.040	ENSMAUG00000005013	Safb	91	92.040	Mesocricetus_auratus
ENSCANG00000004774	-	99	86.667	ENSMICG00000034927	-	77	96.739	Microcebus_murinus
ENSCANG00000004774	-	100	96.500	ENSMICG00000008739	-	100	76.393	Microcebus_murinus
ENSCANG00000004774	-	88	92.473	ENSMICG00000046795	-	98	96.667	Microcebus_murinus
ENSCANG00000004774	-	99	92.040	ENSMOCG00000014040	Safb	96	92.040	Microtus_ochrogaster
ENSCANG00000004774	-	75	56.098	ENSMMOG00000020366	-	65	52.381	Mola_mola
ENSCANG00000004774	-	100	75.980	ENSMODG00000001236	SAFB	87	75.980	Monodelphis_domestica
ENSCANG00000004774	-	90	46.584	ENSMALG00000020330	safb	83	47.205	Monopterus_albus
ENSCANG00000004774	-	99	93.035	MGP_CAROLIEiJ_G0021780	Safb	96	93.035	Mus_caroli
ENSCANG00000004774	-	99	93.035	ENSMUSG00000071054	Safb	96	93.035	Mus_musculus
ENSCANG00000004774	-	99	93.035	MGP_PahariEiJ_G0020769	Safb	96	93.035	Mus_pahari
ENSCANG00000004774	-	100	95.025	ENSMPUG00000006123	SAFB	90	95.025	Mustela_putorius_furo
ENSCANG00000004774	-	99	91.721	ENSMLUG00000001081	SAFB	96	84.058	Myotis_lucifugus
ENSCANG00000004774	-	99	90.050	ENSNGAG00000019882	Safb	95	90.050	Nannospalax_galili
ENSCANG00000004774	-	75	54.651	ENSNBRG00000000496	-	81	54.651	Neolamprologus_brichardi
ENSCANG00000004774	-	99	99.356	ENSNLEG00000013551	SAFB	100	86.232	Nomascus_leucogenys
ENSCANG00000004774	-	86	89.172	ENSOPRG00000011561	-	95	89.172	Ochotona_princeps
ENSCANG00000004774	-	99	93.035	ENSODEG00000014838	SAFB	96	93.035	Octodon_degus
ENSCANG00000004774	-	65	61.644	ENSONIG00000002318	safb	64	43.760	Oreochromis_niloticus
ENSCANG00000004774	-	52	66.667	ENSOANG00000002184	-	92	66.434	Ornithorhynchus_anatinus
ENSCANG00000004774	-	89	89.055	ENSOCUG00000014628	SAFB	90	89.055	Oryctolagus_cuniculus
ENSCANG00000004774	-	60	63.235	ENSORLG00000016989	safb	95	34.884	Oryzias_latipes
ENSCANG00000004774	-	93	35.344	ENSORLG00020000404	safb	98	37.437	Oryzias_latipes_hni
ENSCANG00000004774	-	60	64.706	ENSORLG00015010733	safb	95	35.605	Oryzias_latipes_hsok
ENSCANG00000004774	-	60	64.706	ENSOMEG00000009066	safb	95	33.637	Oryzias_melastigma
ENSCANG00000004774	-	99	92.707	ENSOGAG00000027769	SAFB	100	73.610	Otolemur_garnettii
ENSCANG00000004774	-	100	90.499	ENSOARG00000007662	-	100	86.070	Ovis_aries
ENSCANG00000004774	-	68	87.097	ENSOARG00000007856	-	92	78.159	Ovis_aries
ENSCANG00000004774	-	100	100.000	ENSPPAG00000035129	SAFB	100	100.000	Pan_paniscus
ENSCANG00000004774	-	100	95.025	ENSPPRG00000017197	SAFB	95	95.025	Panthera_pardus
ENSCANG00000004774	-	100	100.000	ENSPTRG00000010335	SAFB	100	100.000	Pan_troglodytes
ENSCANG00000004774	-	100	99.196	ENSPANG00000007770	SAFB	100	99.057	Papio_anubis
ENSCANG00000004774	-	94	45.426	ENSPKIG00000009902	safb	95	39.795	Paramormyrops_kingsleyae
ENSCANG00000004774	-	99	64.216	ENSPSIG00000011679	-	95	64.216	Pelodiscus_sinensis
ENSCANG00000004774	-	99	65.854	ENSPSIG00000009367	-	86	63.725	Pelodiscus_sinensis
ENSCANG00000004774	-	75	60.241	ENSPMGG00000015973	-	61	61.972	Periophthalmus_magnuspinnatus
ENSCANG00000004774	-	99	91.542	ENSPEMG00000020428	Safb	96	91.542	Peromyscus_maniculatus_bairdii
ENSCANG00000004774	-	58	83.058	ENSPCIG00000009504	-	82	83.058	Phascolarctos_cinereus
ENSCANG00000004774	-	87	42.754	ENSPFOG00000007745	safb	94	41.096	Poecilia_formosa
ENSCANG00000004774	-	60	62.121	ENSPLAG00000001614	safb	95	34.852	Poecilia_latipinna
ENSCANG00000004774	-	61	61.194	ENSPMEG00000021023	safb	94	36.293	Poecilia_mexicana
ENSCANG00000004774	-	89	40.351	ENSPREG00000012496	safb	98	38.693	Poecilia_reticulata
ENSCANG00000004774	-	100	99.517	ENSPPYG00000009428	SAFB	100	86.354	Pongo_abelii
ENSCANG00000004774	-	99	87.562	ENSPCAG00000006475	SAFB	100	87.562	Procavia_capensis
ENSCANG00000004774	-	100	96.482	ENSPCOG00000014090	SAFB	100	73.275	Propithecus_coquereli
ENSCANG00000004774	-	100	87.736	ENSPCOG00000010436	-	94	87.736	Propithecus_coquereli
ENSCANG00000004774	-	99	91.475	ENSPVAG00000004913	SAFB	95	80.966	Pteropus_vampyrus
ENSCANG00000004774	-	92	45.087	ENSPNAG00000021838	safb	89	46.328	Pygocentrus_nattereri
ENSCANG00000004774	-	99	92.040	ENSRNOG00000050543	Safb	96	92.040	Rattus_norvegicus
ENSCANG00000004774	-	100	100.000	ENSRBIG00000042509	SAFB	100	100.000	Rhinopithecus_bieti
ENSCANG00000004774	-	100	100.000	ENSRROG00000029278	SAFB	100	100.000	Rhinopithecus_roxellana
ENSCANG00000004774	-	100	98.551	ENSSBOG00000026291	SAFB	100	85.917	Saimiri_boliviensis_boliviensis
ENSCANG00000004774	-	95	46.982	ENSSFOG00015008156	safb	95	40.930	Scleropages_formosus
ENSCANG00000004774	-	93	43.279	ENSSMAG00000009316	safb	83	42.577	Scophthalmus_maximus
ENSCANG00000004774	-	93	43.367	ENSSDUG00000009652	safb	94	39.039	Seriola_dumerili
ENSCANG00000004774	-	93	43.878	ENSSLDG00000001670	safb	80	45.349	Seriola_lalandi_dorsalis
ENSCANG00000004774	-	92	84.657	ENSSARG00000010475	SAFB	95	82.500	Sorex_araneus
ENSCANG00000004774	-	85	56.629	ENSSPUG00000009747	-	99	50.380	Sphenodon_punctatus
ENSCANG00000004774	-	79	68.263	ENSSPUG00000009820	-	95	64.804	Sphenodon_punctatus
ENSCANG00000004774	-	85	54.400	ENSSPAG00000015682	safb	97	36.910	Stegastes_partitus
ENSCANG00000004774	-	99	95.025	ENSSSCG00000013522	SAFB	99	98.361	Sus_scrofa
ENSCANG00000004774	-	87	61.290	ENSTGUG00000000502	-	86	68.235	Taeniopygia_guttata
ENSCANG00000004774	-	91	71.223	ENSTGUG00000000489	-	92	71.223	Taeniopygia_guttata
ENSCANG00000004774	-	88	49.254	ENSTRUG00000003567	safb	95	36.121	Takifugu_rubripes
ENSCANG00000004774	-	84	56.322	ENSTNIG00000015470	safb	100	51.639	Tetraodon_nigroviridis
ENSCANG00000004774	-	59	95.238	ENSTBEG00000013124	-	62	86.364	Tupaia_belangeri
ENSCANG00000004774	-	93	98.413	ENSTTRG00000013588	SAFB	88	98.413	Tursiops_truncatus
ENSCANG00000004774	-	84	95.025	ENSUAMG00000024543	SAFB	95	95.025	Ursus_americanus
ENSCANG00000004774	-	92	92.233	ENSUAMG00000024667	-	88	92.233	Ursus_americanus
ENSCANG00000004774	-	95	93.617	ENSUMAG00000009734	SAFB	91	93.617	Ursus_maritimus
ENSCANG00000004774	-	70	94.915	ENSVPAG00000012043	SAFB	67	94.915	Vicugna_pacos
ENSCANG00000004774	-	100	95.025	ENSVVUG00000013720	SAFB	83	95.025	Vulpes_vulpes
ENSCANG00000004774	-	93	57.692	ENSXETG00000008755	safb	82	61.818	Xenopus_tropicalis
ENSCANG00000004774	-	78	55.294	ENSXCOG00000010246	-	66	62.687	Xiphophorus_couchianus
ENSCANG00000004774	-	61	59.701	ENSXMAG00000003458	safb	94	36.808	Xiphophorus_maculatus