EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000005173 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 1671 bases
Position: chrKN979763.1:3341738-3343408
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000001411	RRM_5	PF13893.6	4e-41	1	2
ENSCANP00000001411	RRM_5	PF13893.6	4e-41	2	2
ENSCANP00000001411	RRM_1	PF00076.22	3.1e-17	1	2
ENSCANP00000001411	RRM_1	PF00076.22	3.1e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000005688	-	591	-	ENSCANP00000001411	196 (aa)	-	A0A2K5HAP7

Gene Model

Click here to download ENSCANG00000005173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000005173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000005173	-	98	85.641	ENSCANG00000040666	-	98	85.641
ENSCANG00000005173	-	98	95.876	ENSCANG00000038259	PTBP1	100	95.876
ENSCANG00000005173	-	57	32.759	ENSCANG00000025310	NONO	64	32.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000005173	-	100	95.939	ENSG00000011304	PTBP1	100	95.939	Homo_sapiens
ENSCANG00000005173	-	93	74.863	ENSACLG00000001885	ptbp2b	99	74.863	Astatotilapia_calliptera
ENSCANG00000005173	-	94	95.109	ENSCJAG00000020162	-	89	95.109	Callithrix_jacchus
ENSCANG00000005173	-	84	79.394	ENSCAPG00000009749	-	51	79.394	Cavia_aperea
ENSCANG00000005173	-	100	95.431	ENSCCAG00000025811	-	100	95.431	Cebus_capucinus
ENSCANG00000005173	-	100	95.939	ENSCATG00000033337	-	100	95.939	Cercocebus_atys
ENSCANG00000005173	-	93	63.934	ENSCING00000002002	-	91	63.934	Ciona_intestinalis
ENSCANG00000005173	-	98	83.938	ENSCGRG00000006229	-	98	83.938	Cricetulus_griseus_crigri
ENSCANG00000005173	-	95	65.054	ENSCVAG00000021593	-	97	68.786	Cyprinodon_variegatus
ENSCANG00000005173	-	93	76.503	ENSDARG00000101947	ptbp2a	99	76.503	Danio_rerio
ENSCANG00000005173	-	94	77.717	ENSDARG00000031907	ptbp1b	69	63.587	Danio_rerio
ENSCANG00000005173	-	93	76.503	ENSEBUG00000001730	ptbp1a	60	76.503	Eptatretus_burgeri
ENSCANG00000005173	-	77	90.066	ENSEASG00005021535	-	100	90.066	Equus_asinus_asinus
ENSCANG00000005173	-	100	93.401	ENSFCAG00000001219	PTBP1	100	93.401	Felis_catus
ENSCANG00000005173	-	100	78.788	ENSGGOG00000005090	-	100	78.788	Gorilla_gorilla
ENSCANG00000005173	-	92	75.275	ENSGGOG00000026783	-	92	71.038	Gorilla_gorilla
ENSCANG00000005173	-	77	77.483	ENSHBUG00000000040	-	100	77.483	Haplochromis_burtoni
ENSCANG00000005173	-	72	94.326	ENSHGLG00100004890	-	100	94.326	Heterocephalus_glaber_male
ENSCANG00000005173	-	93	78.142	ENSHCOG00000013349	ptbp2a	76	78.142	Hippocampus_comes
ENSCANG00000005173	-	93	74.317	ENSHCOG00000015622	-	85	74.317	Hippocampus_comes
ENSCANG00000005173	-	100	95.939	ENSMFAG00000038325	-	100	95.939	Macaca_fascicularis
ENSCANG00000005173	-	100	95.939	ENSMMUG00000016450	-	100	95.939	Macaca_mulatta
ENSCANG00000005173	-	100	95.939	ENSMNEG00000028851	PTBP1	100	95.939	Macaca_nemestrina
ENSCANG00000005173	-	98	95.876	ENSMLEG00000013865	PTBP1	100	95.876	Mandrillus_leucophaeus
ENSCANG00000005173	-	100	94.416	ENSMICG00000007131	PTBP1	100	94.416	Microcebus_murinus
ENSCANG00000005173	-	91	73.889	ENSMALG00000013144	ptbp3	95	73.889	Monopterus_albus
ENSCANG00000005173	-	93	74.863	ENSNBRG00000001492	-	82	74.863	Neolamprologus_brichardi
ENSCANG00000005173	-	98	95.876	ENSNLEG00000000864	PTBP1	100	95.876	Nomascus_leucogenys
ENSCANG00000005173	-	94	93.478	ENSOPRG00000000964	PTBP1	52	93.478	Ochotona_princeps
ENSCANG00000005173	-	93	80.328	ENSOANG00000008979	-	97	80.328	Ornithorhynchus_anatinus
ENSCANG00000005173	-	85	74.699	ENSOMEG00000009759	ptbp2a	100	74.699	Oryzias_melastigma
ENSCANG00000005173	-	100	95.939	ENSPPAG00000032109	-	100	95.939	Pan_paniscus
ENSCANG00000005173	-	100	76.884	ENSPPAG00000011962	-	100	76.884	Pan_paniscus
ENSCANG00000005173	-	100	92.893	ENSPPRG00000006787	PTBP1	100	92.893	Panthera_pardus
ENSCANG00000005173	-	100	95.939	ENSPTRG00000010165	PTBP1	100	95.939	Pan_troglodytes
ENSCANG00000005173	-	100	95.939	ENSPANG00000007281	PTBP1	100	95.939	Papio_anubis
ENSCANG00000005173	-	94	78.804	ENSPMGG00000020540	-	100	77.174	Periophthalmus_magnuspinnatus
ENSCANG00000005173	-	73	60.839	ENSPMAG00000007617	-	88	60.839	Petromyzon_marinus
ENSCANG00000005173	-	72	77.305	ENSPREG00000000963	-	100	77.305	Poecilia_reticulata
ENSCANG00000005173	-	100	94.416	ENSPCOG00000015093	PTBP1	100	94.416	Propithecus_coquereli
ENSCANG00000005173	-	92	67.582	ENSPNYG00000005126	-	98	67.582	Pundamilia_nyererei
ENSCANG00000005173	-	100	73.980	ENSRBIG00000026293	-	100	73.980	Rhinopithecus_bieti
ENSCANG00000005173	-	100	95.939	ENSRBIG00000044228	PTBP1	100	95.939	Rhinopithecus_bieti
ENSCANG00000005173	-	98	84.456	ENSRBIG00000007193	-	98	84.456	Rhinopithecus_bieti
ENSCANG00000005173	-	98	73.057	ENSRROG00000021572	-	98	73.057	Rhinopithecus_roxellana
ENSCANG00000005173	-	100	75.000	ENSRROG00000044920	-	100	75.000	Rhinopithecus_roxellana
ENSCANG00000005173	-	100	95.939	ENSRROG00000016534	PTBP1	100	95.939	Rhinopithecus_roxellana
ENSCANG00000005173	-	98	95.361	ENSSBOG00000034376	-	100	95.361	Saimiri_boliviensis_boliviensis
ENSCANG00000005173	-	59	70.085	ENSSLDG00000009104	-	90	70.085	Seriola_lalandi_dorsalis
ENSCANG00000005173	-	72	61.806	ENSSPAG00000008968	-	84	61.806	Stegastes_partitus
ENSCANG00000005173	-	77	76.821	ENSTRUG00000000761	ptbp2a	100	76.821	Takifugu_rubripes
ENSCANG00000005173	-	72	78.014	ENSUAMG00000011687	-	100	78.014	Ursus_americanus
ENSCANG00000005173	-	74	89.655	ENSUMAG00000005396	-	99	89.655	Ursus_maritimus
ENSCANG00000005173	-	86	31.073	ENSXETG00000033350	HNRNPLL	70	31.073	Xenopus_tropicalis
ENSCANG00000005173	-	93	68.984	ENSXCOG00000007998	ptbp2b	93	68.984	Xiphophorus_couchianus