EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000005805 (Gene tree)
Gene ID: 105505894
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrKN979718.1:18666823-18669558
Accession: 105505894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000001538	RNA_ligase	PF09414.10	4.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000006421	LIG4-201	2736	XM_011933870	ENSCANP00000001538	911 (aa)	XP_011789260	A0A2K5HB22

Gene Model

Click here to download ENSCANG00000005805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000005805's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000005805	LIG4	100	97.256	ENSG00000174405	LIG4	100	97.393	Homo_sapiens
ENSCANG00000005805	LIG4	99	64.648	ENSAPOG00000000866	lig4	99	64.868	Acanthochromis_polyacanthus
ENSCANG00000005805	LIG4	100	88.913	ENSAMEG00000019685	LIG4	99	88.913	Ailuropoda_melanoleuca
ENSCANG00000005805	LIG4	99	65.965	ENSACIG00000018309	lig4	98	66.186	Amphilophus_citrinellus
ENSCANG00000005805	LIG4	99	64.758	ENSAOCG00000011768	lig4	99	64.978	Amphiprion_ocellaris
ENSCANG00000005805	LIG4	99	64.868	ENSAPEG00000017815	lig4	99	65.088	Amphiprion_percula
ENSCANG00000005805	LIG4	99	65.055	ENSATEG00000005583	lig4	99	65.165	Anabas_testudineus
ENSCANG00000005805	LIG4	97	74.773	ENSAPLG00000001673	LIG4	99	74.773	Anas_platyrhynchos
ENSCANG00000005805	LIG4	99	75.330	ENSACAG00000014566	LIG4	99	75.330	Anolis_carolinensis
ENSCANG00000005805	LIG4	100	95.609	ENSANAG00000012446	LIG4	100	95.609	Aotus_nancymaae
ENSCANG00000005805	LIG4	99	65.521	ENSACLG00000027051	lig4	98	65.521	Astatotilapia_calliptera
ENSCANG00000005805	LIG4	99	64.530	ENSAMXG00000008192	lig4	93	64.530	Astyanax_mexicanus
ENSCANG00000005805	LIG4	100	88.364	ENSBTAG00000015868	LIG4	100	88.364	Bos_taurus
ENSCANG00000005805	LIG4	100	95.060	ENSCJAG00000014689	LIG4	100	95.060	Callithrix_jacchus
ENSCANG00000005805	LIG4	100	90.231	ENSCAFG00000006031	LIG4	100	90.231	Canis_familiaris
ENSCANG00000005805	LIG4	100	90.231	ENSCAFG00020021230	LIG4	100	90.231	Canis_lupus_dingo
ENSCANG00000005805	LIG4	100	88.145	ENSCHIG00000001019	LIG4	100	88.145	Capra_hircus
ENSCANG00000005805	LIG4	99	87.818	ENSCAPG00000006284	LIG4	99	87.818	Cavia_aperea
ENSCANG00000005805	LIG4	100	87.706	ENSCPOG00000014266	LIG4	100	87.706	Cavia_porcellus
ENSCANG00000005805	LIG4	100	94.731	ENSCCAG00000019971	LIG4	100	94.731	Cebus_capucinus
ENSCANG00000005805	LIG4	100	99.012	ENSCATG00000021075	LIG4	100	99.012	Cercocebus_atys
ENSCANG00000005805	LIG4	100	89.023	ENSCLAG00000003376	LIG4	100	89.023	Chinchilla_lanigera
ENSCANG00000005805	LIG4	100	99.122	ENSCSAG00000000211	LIG4	100	99.122	Chlorocebus_sabaeus
ENSCANG00000005805	LIG4	99	79.249	ENSCPBG00000023291	LIG4	100	78.758	Chrysemys_picta_bellii
ENSCANG00000005805	LIG4	68	44.833	ENSCING00000009536	-	95	44.833	Ciona_intestinalis
ENSCANG00000005805	LIG4	83	44.809	ENSCSAVG00000010336	-	98	44.809	Ciona_savignyi
ENSCANG00000005805	LIG4	100	86.732	ENSCGRG00001012072	Lig4	100	86.732	Cricetulus_griseus_chok1gshd
ENSCANG00000005805	LIG4	100	86.732	ENSCGRG00000013417	Lig4	100	86.732	Cricetulus_griseus_crigri
ENSCANG00000005805	LIG4	97	66.704	ENSCSEG00000013905	lig4	95	66.704	Cynoglossus_semilaevis
ENSCANG00000005805	LIG4	99	65.604	ENSCVAG00000007896	lig4	99	65.604	Cyprinodon_variegatus
ENSCANG00000005805	LIG4	99	64.341	ENSDARG00000060620	lig4	98	64.341	Danio_rerio
ENSCANG00000005805	LIG4	100	89.803	ENSDNOG00000000513	LIG4	100	89.803	Dasypus_novemcinctus
ENSCANG00000005805	LIG4	100	89.243	ENSDORG00000027303	Lig4	100	89.243	Dipodomys_ordii
ENSCANG00000005805	LIG4	89	31.111	FBgn0030506	Lig4	91	31.111	Drosophila_melanogaster
ENSCANG00000005805	LIG4	99	84.368	ENSETEG00000015563	LIG4	100	84.701	Echinops_telfairi
ENSCANG00000005805	LIG4	99	43.533	ENSEBUG00000014243	lig4	99	43.533	Eptatretus_burgeri
ENSCANG00000005805	LIG4	100	90.889	ENSEASG00005022073	LIG4	100	90.889	Equus_asinus_asinus
ENSCANG00000005805	LIG4	100	90.340	ENSECAG00000003257	LIG4	100	90.340	Equus_caballus
ENSCANG00000005805	LIG4	99	66.373	ENSELUG00000006787	lig4	99	66.483	Esox_lucius
ENSCANG00000005805	LIG4	100	89.243	ENSFCAG00000031985	LIG4	100	89.243	Felis_catus
ENSCANG00000005805	LIG4	89	75.277	ENSFALG00000004214	LIG4	98	75.277	Ficedula_albicollis
ENSCANG00000005805	LIG4	100	89.462	ENSFDAG00000008973	LIG4	100	89.462	Fukomys_damarensis
ENSCANG00000005805	LIG4	99	64.784	ENSFHEG00000007398	lig4	89	64.784	Fundulus_heteroclitus
ENSCANG00000005805	LIG4	85	64.858	ENSGMOG00000012843	lig4	99	64.858	Gadus_morhua
ENSCANG00000005805	LIG4	100	74.563	ENSGALG00000016854	LIG4	100	74.563	Gallus_gallus
ENSCANG00000005805	LIG4	99	65.145	ENSGAFG00000019779	lig4	95	64.945	Gambusia_affinis
ENSCANG00000005805	LIG4	99	63.123	ENSGACG00000014135	lig4	99	63.455	Gasterosteus_aculeatus
ENSCANG00000005805	LIG4	100	97.585	ENSGGOG00000027771	LIG4	100	97.585	Gorilla_gorilla
ENSCANG00000005805	LIG4	99	65.299	ENSHBUG00000006245	lig4	98	65.299	Haplochromis_burtoni
ENSCANG00000005805	LIG4	100	89.572	ENSHGLG00000000718	LIG4	100	89.572	Heterocephalus_glaber_female
ENSCANG00000005805	LIG4	100	89.572	ENSHGLG00100003265	LIG4	100	89.572	Heterocephalus_glaber_male
ENSCANG00000005805	LIG4	99	64.176	ENSHCOG00000012010	lig4	99	64.176	Hippocampus_comes
ENSCANG00000005805	LIG4	100	64.449	ENSIPUG00000013748	lig4	100	64.449	Ictalurus_punctatus
ENSCANG00000005805	LIG4	100	89.791	ENSSTOG00000024303	LIG4	100	89.791	Ictidomys_tridecemlineatus
ENSCANG00000005805	LIG4	100	87.925	ENSJJAG00000006750	Lig4	100	87.925	Jaculus_jaculus
ENSCANG00000005805	LIG4	99	65.116	ENSKMAG00000001149	lig4	99	65.116	Kryptolebias_marmoratus
ENSCANG00000005805	LIG4	91	65.745	ENSLBEG00000014578	lig4	100	65.986	Labrus_bergylta
ENSCANG00000005805	LIG4	99	72.235	ENSLACG00000003282	LIG4	99	72.235	Latimeria_chalumnae
ENSCANG00000005805	LIG4	99	70.285	ENSLOCG00000008901	lig4	98	70.285	Lepisosteus_oculatus
ENSCANG00000005805	LIG4	100	87.623	ENSLAFG00000031152	LIG4	100	87.623	Loxodonta_africana
ENSCANG00000005805	LIG4	100	99.232	ENSMFAG00000037235	LIG4	100	99.232	Macaca_fascicularis
ENSCANG00000005805	LIG4	100	99.232	ENSMMUG00000008874	LIG4	100	99.232	Macaca_mulatta
ENSCANG00000005805	LIG4	100	99.232	ENSMNEG00000023575	LIG4	100	99.232	Macaca_nemestrina
ENSCANG00000005805	LIG4	100	98.902	ENSMLEG00000026720	LIG4	100	98.902	Mandrillus_leucophaeus
ENSCANG00000005805	LIG4	99	65.604	ENSMAMG00000008472	lig4	99	65.824	Mastacembelus_armatus
ENSCANG00000005805	LIG4	99	65.521	ENSMZEG00005001855	lig4	98	65.521	Maylandia_zebra
ENSCANG00000005805	LIG4	100	75.000	ENSMGAG00000015532	LIG4	100	75.000	Meleagris_gallopavo
ENSCANG00000005805	LIG4	100	84.852	ENSMOCG00000019000	Lig4	100	84.852	Microtus_ochrogaster
ENSCANG00000005805	LIG4	99	65.227	ENSMMOG00000004390	lig4	99	65.227	Mola_mola
ENSCANG00000005805	LIG4	100	83.095	ENSMODG00000025064	LIG4	100	83.553	Monodelphis_domestica
ENSCANG00000005805	LIG4	99	65.487	ENSMALG00000008555	lig4	99	65.487	Monopterus_albus
ENSCANG00000005805	LIG4	100	86.608	MGP_CAROLIEiJ_G0030809	Lig4	100	86.608	Mus_caroli
ENSCANG00000005805	LIG4	100	86.608	ENSMUSG00000049717	Lig4	100	86.608	Mus_musculus
ENSCANG00000005805	LIG4	100	86.498	MGP_PahariEiJ_G0021270	Lig4	100	86.498	Mus_pahari
ENSCANG00000005805	LIG4	100	86.608	MGP_SPRETEiJ_G0031917	Lig4	100	86.608	Mus_spretus
ENSCANG00000005805	LIG4	100	88.255	ENSMPUG00000018675	LIG4	100	88.255	Mustela_putorius_furo
ENSCANG00000005805	LIG4	100	90.560	ENSMLUG00000001267	LIG4	100	90.560	Myotis_lucifugus
ENSCANG00000005805	LIG4	100	86.937	ENSNGAG00000013258	Lig4	100	86.937	Nannospalax_galili
ENSCANG00000005805	LIG4	99	65.567	ENSNBRG00000021252	lig4	99	65.567	Neolamprologus_brichardi
ENSCANG00000005805	LIG4	100	96.597	ENSNLEG00000007888	LIG4	100	96.597	Nomascus_leucogenys
ENSCANG00000005805	LIG4	100	88.035	ENSOPRG00000005765	LIG4	100	88.035	Ochotona_princeps
ENSCANG00000005805	LIG4	100	87.596	ENSODEG00000019683	LIG4	100	87.596	Octodon_degus
ENSCANG00000005805	LIG4	99	65.559	ENSONIG00000011969	lig4	97	65.781	Oreochromis_niloticus
ENSCANG00000005805	LIG4	100	91.218	ENSOCUG00000015734	LIG4	100	91.218	Oryctolagus_cuniculus
ENSCANG00000005805	LIG4	99	64.066	ENSORLG00000004041	lig4	99	64.066	Oryzias_latipes
ENSCANG00000005805	LIG4	99	64.505	ENSORLG00020019607	lig4	99	64.505	Oryzias_latipes_hni
ENSCANG00000005805	LIG4	99	64.176	ENSORLG00015017754	lig4	99	64.176	Oryzias_latipes_hsok
ENSCANG00000005805	LIG4	75	69.853	ENSOMEG00000003459	lig4	99	69.853	Oryzias_melastigma
ENSCANG00000005805	LIG4	100	91.776	ENSOGAG00000032120	LIG4	99	91.776	Otolemur_garnettii
ENSCANG00000005805	LIG4	82	90.067	ENSOARG00000005590	LIG4	98	90.067	Ovis_aries
ENSCANG00000005805	LIG4	100	96.817	ENSPPAG00000032998	LIG4	100	96.817	Pan_paniscus
ENSCANG00000005805	LIG4	100	89.572	ENSPPRG00000017804	LIG4	100	89.572	Panthera_pardus
ENSCANG00000005805	LIG4	100	89.462	ENSPTIG00000010051	LIG4	100	89.462	Panthera_tigris_altaica
ENSCANG00000005805	LIG4	100	96.926	ENSPTRG00000006025	LIG4	100	96.926	Pan_troglodytes
ENSCANG00000005805	LIG4	100	99.122	ENSPANG00000007562	LIG4	100	99.122	Papio_anubis
ENSCANG00000005805	LIG4	99	66.264	ENSPKIG00000011645	lig4	98	66.264	Paramormyrops_kingsleyae
ENSCANG00000005805	LIG4	100	78.712	ENSPSIG00000001504	LIG4	100	78.712	Pelodiscus_sinensis
ENSCANG00000005805	LIG4	99	63.444	ENSPMGG00000013486	lig4	99	63.008	Periophthalmus_magnuspinnatus
ENSCANG00000005805	LIG4	100	87.061	ENSPEMG00000000076	Lig4	100	87.061	Peromyscus_maniculatus_bairdii
ENSCANG00000005805	LIG4	100	83.114	ENSPCIG00000021882	LIG4	100	83.114	Phascolarctos_cinereus
ENSCANG00000005805	LIG4	99	65.406	ENSPFOG00000000797	lig4	99	64.945	Poecilia_formosa
ENSCANG00000005805	LIG4	99	65.295	ENSPLAG00000001196	lig4	99	64.835	Poecilia_latipinna
ENSCANG00000005805	LIG4	99	65.406	ENSPMEG00000021353	lig4	99	64.945	Poecilia_mexicana
ENSCANG00000005805	LIG4	99	65.184	ENSPREG00000007323	lig4	99	64.725	Poecilia_reticulata
ENSCANG00000005805	LIG4	100	97.475	ENSPPYG00000005540	LIG4	100	97.475	Pongo_abelii
ENSCANG00000005805	LIG4	100	90.340	ENSPVAG00000016403	LIG4	100	90.340	Pteropus_vampyrus
ENSCANG00000005805	LIG4	99	65.410	ENSPNYG00000009660	lig4	98	65.410	Pundamilia_nyererei
ENSCANG00000005805	LIG4	100	64.513	ENSPNAG00000028056	lig4	100	64.513	Pygocentrus_nattereri
ENSCANG00000005805	LIG4	100	64.513	ENSPNAG00000028069	LIG4	100	64.513	Pygocentrus_nattereri
ENSCANG00000005805	LIG4	100	85.620	ENSRNOG00000014605	Lig4	100	85.620	Rattus_norvegicus
ENSCANG00000005805	LIG4	100	98.024	ENSRBIG00000039962	LIG4	100	98.024	Rhinopithecus_bieti
ENSCANG00000005805	LIG4	100	99.012	ENSRROG00000006040	LIG4	100	99.012	Rhinopithecus_roxellana
ENSCANG00000005805	LIG4	100	94.731	ENSSBOG00000019029	LIG4	100	94.731	Saimiri_boliviensis_boliviensis
ENSCANG00000005805	LIG4	100	79.583	ENSSHAG00000009525	LIG4	100	80.154	Sarcophilus_harrisii
ENSCANG00000005805	LIG4	100	65.502	ENSSFOG00015012835	lig4	100	65.502	Scleropages_formosus
ENSCANG00000005805	LIG4	99	63.234	ENSSMAG00000011267	lig4	99	63.234	Scophthalmus_maximus
ENSCANG00000005805	LIG4	99	66.408	ENSSDUG00000010343	lig4	98	66.408	Seriola_dumerili
ENSCANG00000005805	LIG4	99	64.563	ENSSLDG00000003239	lig4	99	64.563	Seriola_lalandi_dorsalis
ENSCANG00000005805	LIG4	100	83.370	ENSSARG00000006573	LIG4	100	83.370	Sorex_araneus
ENSCANG00000005805	LIG4	93	77.725	ENSSPUG00000002444	LIG4	100	77.725	Sphenodon_punctatus
ENSCANG00000005805	LIG4	99	65.165	ENSSPAG00000001609	lig4	99	65.165	Stegastes_partitus
ENSCANG00000005805	LIG4	100	87.925	ENSSSCG00000009540	LIG4	100	87.925	Sus_scrofa
ENSCANG00000005805	LIG4	99	74.396	ENSTGUG00000010795	LIG4	100	74.396	Taeniopygia_guttata
ENSCANG00000005805	LIG4	99	65.385	ENSTRUG00000009984	lig4	99	65.385	Takifugu_rubripes
ENSCANG00000005805	LIG4	99	65.449	ENSTNIG00000010348	lig4	99	65.670	Tetraodon_nigroviridis
ENSCANG00000005805	LIG4	100	90.779	ENSTBEG00000017741	LIG4	100	90.779	Tupaia_belangeri
ENSCANG00000005805	LIG4	100	89.133	ENSTTRG00000012660	LIG4	100	89.133	Tursiops_truncatus
ENSCANG00000005805	LIG4	100	89.023	ENSUAMG00000003773	LIG4	100	89.023	Ursus_americanus
ENSCANG00000005805	LIG4	99	72.026	ENSXETG00000002654	lig4	99	72.026	Xenopus_tropicalis
ENSCANG00000005805	LIG4	99	65.072	ENSXCOG00000017401	lig4	99	64.615	Xiphophorus_couchianus
ENSCANG00000005805	LIG4	99	65.111	ENSXMAG00000015142	lig4	99	64.654	Xiphophorus_maculatus