EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000006758 (Gene tree)
Gene ID: 105506138
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide F
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 43715 bases
Position: chrKN979385.1:7016851-7060565
Accession: 105506138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000001801	LSM	PF01423.22	3.7e-21	1	1
ENSCANP00000001823	LSM	PF01423.22	8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000007438	-	769	XM_011934181	ENSCANP00000001801	86 (aa)	XP_011789571	A0A2K5HBS7
ENSCANT00000007535	-	384	-	ENSCANP00000001823	127 (aa)	-	A0A2K5HBW3

Gene Model

Click here to download ENSCANG00000006758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000006758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000006758	-	77	51.515	ENSCANG00000041263	-	83	51.515
ENSCANG00000006758	-	77	51.515	ENSCANG00000006849	-	83	51.515
ENSCANG00000006758	-	73	42.424	ENSCANG00000035214	-	87	42.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000006758	-	50	97.674	ENSCHIG00000017139	-	87	91.525	Capra_hircus
ENSCANG00000006758	-	100	100.000	ENSCATG00000003132	-	100	100.000	Cercocebus_atys
ENSCANG00000006758	-	50	100.000	ENSCPBG00000001948	-	94	91.837	Chrysemys_picta_bellii
ENSCANG00000006758	-	91	58.974	ENSFCAG00000037511	-	87	61.644	Felis_catus
ENSCANG00000006758	-	51	90.909	ENSFCAG00000032773	-	70	90.909	Felis_catus
ENSCANG00000006758	-	57	87.755	ENSGAGG00000014834	-	75	97.727	Gopherus_agassizii
ENSCANG00000006758	-	100	100.000	ENSMFAG00000035517	-	100	100.000	Macaca_fascicularis
ENSCANG00000006758	-	100	100.000	ENSMMUG00000009302	-	100	100.000	Macaca_mulatta
ENSCANG00000006758	-	100	100.000	ENSMNEG00000030762	-	100	100.000	Macaca_nemestrina
ENSCANG00000006758	-	100	100.000	ENSMLEG00000033558	-	100	100.000	Mandrillus_leucophaeus
ENSCANG00000006758	-	100	100.000	ENSNLEG00000005835	-	100	100.000	Nomascus_leucogenys
ENSCANG00000006758	-	50	97.674	ENSOGAG00000014320	-	100	96.226	Otolemur_garnettii
ENSCANG00000006758	-	100	100.000	ENSPPAG00000003072	-	100	100.000	Pan_paniscus
ENSCANG00000006758	-	73	76.190	ENSPPRG00000020147	-	100	76.190	Panthera_pardus
ENSCANG00000006758	-	100	100.000	ENSPTRG00000005317	-	100	93.701	Pan_troglodytes
ENSCANG00000006758	-	99	98.824	ENSPANG00000014632	-	100	97.638	Papio_anubis
ENSCANG00000006758	-	100	100.000	ENSPCIG00000017205	-	100	100.000	Phascolarctos_cinereus
ENSCANG00000006758	-	53	93.478	ENSPFOG00000020883	-	100	93.478	Poecilia_formosa
ENSCANG00000006758	-	100	100.000	ENSRBIG00000028811	-	100	100.000	Rhinopithecus_bieti
ENSCANG00000006758	-	100	100.000	ENSRROG00000031057	-	100	100.000	Rhinopithecus_roxellana
ENSCANG00000006758	-	64	78.182	ENSVVUG00000003155	-	73	78.182	Vulpes_vulpes