EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000007120 (Gene tree)
Gene ID: 105517929
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 11095 bases
Position: chrKN981713.1:3917730-3928824
Accession: 105517929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000001930	MBD	PF01429.19	2.7e-21	1	1
ENSCANP00000001959	MBD	PF01429.19	6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000008102	MBD4-202	1527	-	ENSCANP00000001959	508 (aa)	-	A0A2K5HC82
ENSCANT00000008012	MBD4-201	2629	XM_011950694	ENSCANP00000001930	572 (aa)	XP_011806084	A0A2K5HC73

Gene Model

Click here to download ENSCANG00000007120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000007120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000007120	MBD4	100	93.913	ENSG00000129071	MBD4	100	93.913	Homo_sapiens
ENSCANG00000007120	MBD4	99	76.083	ENSAMEG00000004562	MBD4	99	76.083	Ailuropoda_melanoleuca
ENSCANG00000007120	MBD4	52	60.338	ENSAOCG00000001157	mbd4	62	60.338	Amphiprion_ocellaris
ENSCANG00000007120	MBD4	85	41.189	ENSAPEG00000016131	mbd4	95	40.816	Amphiprion_percula
ENSCANG00000007120	MBD4	99	70.855	ENSBTAG00000021645	MBD4	100	70.855	Bos_taurus
ENSCANG00000007120	MBD4	100	86.528	ENSCJAG00000017293	MBD4	100	86.528	Callithrix_jacchus
ENSCANG00000007120	MBD4	99	75.694	ENSCAFG00000004867	MBD4	99	75.694	Canis_familiaris
ENSCANG00000007120	MBD4	99	75.694	ENSCAFG00020007082	MBD4	99	75.694	Canis_lupus_dingo
ENSCANG00000007120	MBD4	99	69.634	ENSCHIG00000009760	MBD4	100	69.634	Capra_hircus
ENSCANG00000007120	MBD4	100	87.565	ENSCCAG00000029796	MBD4	100	87.565	Cebus_capucinus
ENSCANG00000007120	MBD4	100	97.727	ENSCATG00000035211	MBD4	100	97.727	Cercocebus_atys
ENSCANG00000007120	MBD4	98	69.542	ENSCLAG00000008974	MBD4	99	69.190	Chinchilla_lanigera
ENSCANG00000007120	MBD4	100	96.853	ENSCSAG00000009037	MBD4	100	96.853	Chlorocebus_sabaeus
ENSCANG00000007120	MBD4	87	50.766	ENSCPBG00000014704	MBD4	89	50.288	Chrysemys_picta_bellii
ENSCANG00000007120	MBD4	99	67.657	ENSCGRG00001003507	Mbd4	100	67.657	Cricetulus_griseus_chok1gshd
ENSCANG00000007120	MBD4	99	67.657	ENSCGRG00000010974	Mbd4	100	67.657	Cricetulus_griseus_crigri
ENSCANG00000007120	MBD4	99	76.182	ENSDNOG00000049619	MBD4	100	76.182	Dasypus_novemcinctus
ENSCANG00000007120	MBD4	80	62.955	ENSDORG00000000902	-	95	62.955	Dipodomys_ordii
ENSCANG00000007120	MBD4	54	50.763	ENSEBUG00000010816	mbd4	73	50.763	Eptatretus_burgeri
ENSCANG00000007120	MBD4	99	78.010	ENSEASG00005014800	MBD4	100	78.010	Equus_asinus_asinus
ENSCANG00000007120	MBD4	99	78.010	ENSECAG00000022106	MBD4	100	78.010	Equus_caballus
ENSCANG00000007120	MBD4	95	60.364	ENSEEUG00000011459	MBD4	93	63.294	Erinaceus_europaeus
ENSCANG00000007120	MBD4	99	77.163	ENSFCAG00000000083	MBD4	99	77.163	Felis_catus
ENSCANG00000007120	MBD4	81	46.042	ENSFALG00000013663	MBD4	99	46.061	Ficedula_albicollis
ENSCANG00000007120	MBD4	87	51.149	ENSGAGG00000018644	MBD4	89	50.958	Gopherus_agassizii
ENSCANG00000007120	MBD4	100	92.255	ENSGGOG00000010698	MBD4	100	92.255	Gorilla_gorilla
ENSCANG00000007120	MBD4	96	73.250	ENSHGLG00000009034	MBD4	98	73.250	Heterocephalus_glaber_female
ENSCANG00000007120	MBD4	96	73.250	ENSHGLG00100000135	MBD4	98	73.250	Heterocephalus_glaber_male
ENSCANG00000007120	MBD4	99	72.887	ENSSTOG00000020663	MBD4	100	72.887	Ictidomys_tridecemlineatus
ENSCANG00000007120	MBD4	99	75.043	ENSLAFG00000010609	MBD4	99	75.043	Loxodonta_africana
ENSCANG00000007120	MBD4	100	96.853	ENSMFAG00000002266	MBD4	100	96.853	Macaca_fascicularis
ENSCANG00000007120	MBD4	100	94.828	ENSMMUG00000012723	MBD4	100	94.828	Macaca_mulatta
ENSCANG00000007120	MBD4	96	96.533	ENSMNEG00000029752	MBD4	99	96.533	Macaca_nemestrina
ENSCANG00000007120	MBD4	100	97.552	ENSMLEG00000024859	MBD4	100	97.552	Mandrillus_leucophaeus
ENSCANG00000007120	MBD4	100	80.138	ENSMICG00000008022	MBD4	100	80.138	Microcebus_murinus
ENSCANG00000007120	MBD4	71	50.829	ENSMOCG00000002466	-	97	49.239	Microtus_ochrogaster
ENSCANG00000007120	MBD4	86	58.882	ENSMODG00000006399	-	99	58.483	Monodelphis_domestica
ENSCANG00000007120	MBD4	86	43.114	ENSMALG00000021517	mbd4	87	42.515	Monopterus_albus
ENSCANG00000007120	MBD4	99	66.958	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.958	Mus_caroli
ENSCANG00000007120	MBD4	99	66.434	ENSMUSG00000030322	Mbd4	100	66.434	Mus_musculus
ENSCANG00000007120	MBD4	99	67.714	MGP_PahariEiJ_G0022511	-	100	67.714	Mus_pahari
ENSCANG00000007120	MBD4	99	65.909	MGP_SPRETEiJ_G0029788	Mbd4	100	65.909	Mus_spretus
ENSCANG00000007120	MBD4	99	74.695	ENSMPUG00000017195	MBD4	99	74.695	Mustela_putorius_furo
ENSCANG00000007120	MBD4	94	78.755	ENSMLUG00000014766	MBD4	97	79.735	Myotis_lucifugus
ENSCANG00000007120	MBD4	100	92.573	ENSNLEG00000005337	MBD4	100	92.573	Nomascus_leucogenys
ENSCANG00000007120	MBD4	99	64.421	ENSOPRG00000000473	MBD4	99	64.421	Ochotona_princeps
ENSCANG00000007120	MBD4	83	42.208	ENSONIG00000017212	mbd4	54	79.532	Oreochromis_niloticus
ENSCANG00000007120	MBD4	67	48.205	ENSOANG00000004589	-	89	48.205	Ornithorhynchus_anatinus
ENSCANG00000007120	MBD4	99	67.354	ENSOCUG00000013006	MBD4	100	67.354	Oryctolagus_cuniculus
ENSCANG00000007120	MBD4	99	75.826	ENSOGAG00000010236	MBD4	100	75.478	Otolemur_garnettii
ENSCANG00000007120	MBD4	99	69.808	ENSOARG00000014699	MBD4	100	69.808	Ovis_aries
ENSCANG00000007120	MBD4	100	93.565	ENSPPAG00000036528	MBD4	100	93.565	Pan_paniscus
ENSCANG00000007120	MBD4	99	77.273	ENSPPRG00000016480	MBD4	99	77.273	Panthera_pardus
ENSCANG00000007120	MBD4	100	92.427	ENSPTRG00000015377	MBD4	100	92.427	Pan_troglodytes
ENSCANG00000007120	MBD4	100	96.021	ENSPANG00000015047	MBD4	100	96.021	Papio_anubis
ENSCANG00000007120	MBD4	66	85.135	ENSPSIG00000007892	MBD4	61	85.135	Pelodiscus_sinensis
ENSCANG00000007120	MBD4	90	61.877	ENSPEMG00000006226	Mbd4	97	61.877	Peromyscus_maniculatus_bairdii
ENSCANG00000007120	MBD4	89	58.397	ENSPCIG00000002276	-	98	58.015	Phascolarctos_cinereus
ENSCANG00000007120	MBD4	50	62.376	ENSPFOG00000014471	mbd4	54	77.778	Poecilia_formosa
ENSCANG00000007120	MBD4	100	93.194	ENSPPYG00000013417	MBD4	100	93.194	Pongo_abelii
ENSCANG00000007120	MBD4	95	70.886	ENSPCAG00000012915	MBD4	99	70.886	Procavia_capensis
ENSCANG00000007120	MBD4	99	78.336	ENSPVAG00000005238	MBD4	99	77.990	Pteropus_vampyrus
ENSCANG00000007120	MBD4	99	66.957	ENSRNOG00000010919	Mbd4	100	66.957	Rattus_norvegicus
ENSCANG00000007120	MBD4	100	98.951	ENSRBIG00000027722	MBD4	100	98.951	Rhinopithecus_bieti
ENSCANG00000007120	MBD4	100	98.601	ENSRROG00000029136	MBD4	100	98.601	Rhinopithecus_roxellana
ENSCANG00000007120	MBD4	99	87.500	ENSSBOG00000016810	MBD4	100	86.979	Saimiri_boliviensis_boliviensis
ENSCANG00000007120	MBD4	93	56.192	ENSSHAG00000012953	MBD4	92	56.579	Sarcophilus_harrisii
ENSCANG00000007120	MBD4	85	44.269	ENSSFOG00015016292	mbd4	95	44.071	Scleropages_formosus
ENSCANG00000007120	MBD4	80	61.588	ENSSARG00000004496	-	80	61.588	Sorex_araneus
ENSCANG00000007120	MBD4	86	49.706	ENSSPUG00000017344	MBD4	91	49.706	Sphenodon_punctatus
ENSCANG00000007120	MBD4	99	74.695	ENSSSCG00000033303	MBD4	100	74.695	Sus_scrofa
ENSCANG00000007120	MBD4	85	40.524	ENSTNIG00000017927	mbd4	58	64.398	Tetraodon_nigroviridis
ENSCANG00000007120	MBD4	96	60.550	ENSTBEG00000003041	-	88	60.550	Tupaia_belangeri
ENSCANG00000007120	MBD4	97	75.887	ENSTTRG00000011265	MBD4	100	75.887	Tursiops_truncatus
ENSCANG00000007120	MBD4	86	78.557	ENSUAMG00000000814	MBD4	99	78.557	Ursus_americanus
ENSCANG00000007120	MBD4	99	76.265	ENSUMAG00000017542	MBD4	100	76.265	Ursus_maritimus
ENSCANG00000007120	MBD4	59	95.238	ENSVPAG00000004040	-	55	95.238	Vicugna_pacos
ENSCANG00000007120	MBD4	99	75.174	ENSVVUG00000014222	MBD4	99	75.174	Vulpes_vulpes
ENSCANG00000007120	MBD4	83	42.857	ENSXETG00000026622	mbd4	51	75.956	Xenopus_tropicalis