EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000007183 (Gene tree)
Gene ID: 105508153
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 77104 bases
Position: chrKN980040.1:5934546-6011649
Accession: 105508153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000002708	ResIII	PF04851.15	6.6e-12	1	1
ENSCANP00000002663	ResIII	PF04851.15	6.6e-12	1	1
ENSCANP00000002663	DEAD	PF00270.29	1.8e-06	1	1
ENSCANP00000002708	DEAD	PF00270.29	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000011018	SMARCA1-202	3213	XM_011936966	ENSCANP00000002708	1070 (aa)	XP_011792356	A0A2K5HEE3
ENSCANT00000010779	SMARCA1-201	3982	XM_011936967	ENSCANP00000002663	1058 (aa)	XP_011792357	A0A2K5HE92

Gene Model

Click here to download ENSCANG00000007183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000007183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000007183	SMARCA1	93	85.137	ENSCANG00000041629	SMARCA5	94	85.137
ENSCANG00000007183	SMARCA1	50	41.385	ENSCANG00000043435	CHD6	75	40.048
ENSCANG00000007183	SMARCA1	51	48.207	ENSCANG00000037736	HELLS	79	48.207
ENSCANG00000007183	SMARCA1	54	43.127	ENSCANG00000020239	CHD1L	83	39.881

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000007183	SMARCA1	100	99.907	ENSG00000102038	SMARCA1	100	99.907	Homo_sapiens
ENSCANG00000007183	SMARCA1	92	83.811	ENSAPOG00000016035	smarca5	98	84.136	Acanthochromis_polyacanthus
ENSCANG00000007183	SMARCA1	100	96.916	ENSAMEG00000015218	SMARCA1	100	96.916	Ailuropoda_melanoleuca
ENSCANG00000007183	SMARCA1	85	84.164	ENSACIG00000016982	smarca5	99	84.263	Amphilophus_citrinellus
ENSCANG00000007183	SMARCA1	92	83.811	ENSAOCG00000015578	smarca5	95	82.863	Amphiprion_ocellaris
ENSCANG00000007183	SMARCA1	92	83.811	ENSAPEG00000011117	smarca5	99	84.080	Amphiprion_percula
ENSCANG00000007183	SMARCA1	93	83.401	ENSATEG00000012894	smarca5	94	83.817	Anabas_testudineus
ENSCANG00000007183	SMARCA1	93	93.177	ENSAPLG00000013149	SMARCA1	100	93.177	Anas_platyrhynchos
ENSCANG00000007183	SMARCA1	97	89.515	ENSACAG00000011376	SMARCA1	95	91.391	Anolis_carolinensis
ENSCANG00000007183	SMARCA1	100	94.707	ENSANAG00000023098	SMARCA1	100	94.707	Aotus_nancymaae
ENSCANG00000007183	SMARCA1	96	81.256	ENSACLG00000025356	smarca5	95	83.266	Astatotilapia_calliptera
ENSCANG00000007183	SMARCA1	88	88.602	ENSAMXG00000011227	smarca1	99	90.182	Astyanax_mexicanus
ENSCANG00000007183	SMARCA1	98	80.851	ENSAMXG00000005709	smarca5	94	84.103	Astyanax_mexicanus
ENSCANG00000007183	SMARCA1	99	97.356	ENSBTAG00000002292	SMARCA1	99	97.333	Bos_taurus
ENSCANG00000007183	SMARCA1	93	63.774	WBGene00002169	isw-1	97	63.774	Caenorhabditis_elegans
ENSCANG00000007183	SMARCA1	100	99.622	ENSCJAG00000002868	SMARCA1	100	99.622	Callithrix_jacchus
ENSCANG00000007183	SMARCA1	100	88.848	ENSCAFG00000018673	SMARCA1	99	88.824	Canis_familiaris
ENSCANG00000007183	SMARCA1	100	98.582	ENSCAFG00020001751	SMARCA1	100	98.582	Canis_lupus_dingo
ENSCANG00000007183	SMARCA1	100	97.455	ENSCHIG00000009837	SMARCA1	100	97.455	Capra_hircus
ENSCANG00000007183	SMARCA1	95	99.000	ENSTSYG00000004240	SMARCA1	98	98.371	Carlito_syrichta
ENSCANG00000007183	SMARCA1	98	95.893	ENSCPOG00000013601	SMARCA1	99	95.893	Cavia_porcellus
ENSCANG00000007183	SMARCA1	100	96.692	ENSCCAG00000030817	SMARCA1	100	96.692	Cebus_capucinus
ENSCANG00000007183	SMARCA1	100	99.907	ENSCATG00000015921	SMARCA1	100	99.907	Cercocebus_atys
ENSCANG00000007183	SMARCA1	100	96.975	ENSCLAG00000002171	SMARCA1	100	96.975	Chinchilla_lanigera
ENSCANG00000007183	SMARCA1	100	99.811	ENSCSAG00000008460	SMARCA1	100	99.811	Chlorocebus_sabaeus
ENSCANG00000007183	SMARCA1	95	92.607	ENSCPBG00000001146	SMARCA1	94	92.693	Chrysemys_picta_bellii
ENSCANG00000007183	SMARCA1	92	73.900	ENSCING00000004110	swi/snf	97	73.900	Ciona_intestinalis
ENSCANG00000007183	SMARCA1	92	73.171	ENSCSAVG00000004620	-	100	74.276	Ciona_savignyi
ENSCANG00000007183	SMARCA1	100	95.845	ENSCGRG00001010776	Smarca1	98	96.246	Cricetulus_griseus_chok1gshd
ENSCANG00000007183	SMARCA1	93	95.779	ENSCGRG00000015301	Smarca1	98	96.255	Cricetulus_griseus_crigri
ENSCANG00000007183	SMARCA1	92	83.811	ENSCSEG00000000328	smarca5	95	83.215	Cynoglossus_semilaevis
ENSCANG00000007183	SMARCA1	93	83.198	ENSCVAG00000008668	smarca5	99	83.628	Cyprinodon_variegatus
ENSCANG00000007183	SMARCA1	93	82.828	ENSDARG00000052348	smarca5	95	82.828	Danio_rerio
ENSCANG00000007183	SMARCA1	93	85.474	ENSDARG00000012776	smarca1	97	85.474	Danio_rerio
ENSCANG00000007183	SMARCA1	98	96.135	ENSDNOG00000004315	SMARCA1	99	96.135	Dasypus_novemcinctus
ENSCANG00000007183	SMARCA1	98	96.329	ENSDORG00000009270	Smarca1	99	96.329	Dipodomys_ordii
ENSCANG00000007183	SMARCA1	92	73.183	FBgn0011604	Iswi	98	72.404	Drosophila_melanogaster
ENSCANG00000007183	SMARCA1	77	93.750	ENSETEG00000017426	SMARCA1	85	93.750	Echinops_telfairi
ENSCANG00000007183	SMARCA1	93	81.001	ENSEBUG00000001239	smarca5	96	81.001	Eptatretus_burgeri
ENSCANG00000007183	SMARCA1	97	92.596	ENSEASG00005008218	SMARCA1	100	93.232	Equus_asinus_asinus
ENSCANG00000007183	SMARCA1	100	97.926	ENSECAG00000012106	SMARCA1	100	97.926	Equus_caballus
ENSCANG00000007183	SMARCA1	75	98.013	ENSEEUG00000014927	SMARCA1	83	98.013	Erinaceus_europaeus
ENSCANG00000007183	SMARCA1	94	86.640	ENSELUG00000010515	smarca1	98	87.041	Esox_lucius
ENSCANG00000007183	SMARCA1	100	98.582	ENSFCAG00000018496	SMARCA1	100	98.582	Felis_catus
ENSCANG00000007183	SMARCA1	86	93.428	ENSFALG00000000209	SMARCA1	98	93.531	Ficedula_albicollis
ENSCANG00000007183	SMARCA1	93	97.881	ENSFDAG00000009818	SMARCA1	97	97.881	Fukomys_damarensis
ENSCANG00000007183	SMARCA1	99	79.198	ENSFHEG00000007687	smarca5	94	82.929	Fundulus_heteroclitus
ENSCANG00000007183	SMARCA1	94	90.937	ENSGALG00000008431	SMARCA1	96	92.916	Gallus_gallus
ENSCANG00000007183	SMARCA1	93	83.605	ENSGAFG00000017731	smarca5	95	82.929	Gambusia_affinis
ENSCANG00000007183	SMARCA1	92	93.416	ENSGAGG00000023575	SMARCA1	100	93.416	Gopherus_agassizii
ENSCANG00000007183	SMARCA1	75	96.000	ENSGGOG00000012841	-	98	96.000	Gorilla_gorilla
ENSCANG00000007183	SMARCA1	100	96.975	ENSHGLG00000003080	SMARCA1	100	96.975	Heterocephalus_glaber_female
ENSCANG00000007183	SMARCA1	94	96.703	ENSHGLG00100001102	SMARCA1	100	96.703	Heterocephalus_glaber_male
ENSCANG00000007183	SMARCA1	92	83.640	ENSHCOG00000005458	smarca5	95	82.828	Hippocampus_comes
ENSCANG00000007183	SMARCA1	97	80.705	ENSIPUG00000005229	SMARCA5	97	82.759	Ictalurus_punctatus
ENSCANG00000007183	SMARCA1	95	85.248	ENSIPUG00000016905	Smarca1	99	87.028	Ictalurus_punctatus
ENSCANG00000007183	SMARCA1	100	98.204	ENSSTOG00000014524	SMARCA1	100	98.204	Ictidomys_tridecemlineatus
ENSCANG00000007183	SMARCA1	100	96.049	ENSJJAG00000002593	Smarca1	100	96.049	Jaculus_jaculus
ENSCANG00000007183	SMARCA1	92	83.845	ENSKMAG00000003777	smarca5	95	83.030	Kryptolebias_marmoratus
ENSCANG00000007183	SMARCA1	94	81.737	ENSLBEG00000018112	smarca5	95	82.727	Labrus_bergylta
ENSCANG00000007183	SMARCA1	88	83.996	ENSLBEG00000013295	SMARCA1	100	84.829	Labrus_bergylta
ENSCANG00000007183	SMARCA1	96	89.349	ENSLACG00000016697	SMARCA1	98	90.290	Latimeria_chalumnae
ENSCANG00000007183	SMARCA1	94	88.956	ENSLOCG00000014591	smarca1	97	88.956	Lepisosteus_oculatus
ENSCANG00000007183	SMARCA1	95	96.620	ENSLAFG00000000896	SMARCA1	100	96.620	Loxodonta_africana
ENSCANG00000007183	SMARCA1	100	99.907	ENSMFAG00000002117	SMARCA1	100	99.907	Macaca_fascicularis
ENSCANG00000007183	SMARCA1	100	99.907	ENSMMUG00000008818	SMARCA1	100	99.907	Macaca_mulatta
ENSCANG00000007183	SMARCA1	100	99.907	ENSMNEG00000041768	SMARCA1	100	99.907	Macaca_nemestrina
ENSCANG00000007183	SMARCA1	100	99.813	ENSMLEG00000043198	SMARCA1	100	99.813	Mandrillus_leucophaeus
ENSCANG00000007183	SMARCA1	93	83.809	ENSMAMG00000014294	smarca5	96	82.683	Mastacembelus_armatus
ENSCANG00000007183	SMARCA1	96	81.256	ENSMZEG00005009369	smarca5	95	83.266	Maylandia_zebra
ENSCANG00000007183	SMARCA1	95	91.232	ENSMGAG00000007042	SMARCA1	99	91.395	Meleagris_gallopavo
ENSCANG00000007183	SMARCA1	98	96.180	ENSMAUG00000008133	Smarca1	99	95.769	Mesocricetus_auratus
ENSCANG00000007183	SMARCA1	100	98.204	ENSMICG00000015768	SMARCA1	100	98.204	Microcebus_murinus
ENSCANG00000007183	SMARCA1	100	95.579	ENSMOCG00000009464	Smarca1	98	95.973	Microtus_ochrogaster
ENSCANG00000007183	SMARCA1	93	81.332	ENSMMOG00000005547	smarca5	99	81.332	Mola_mola
ENSCANG00000007183	SMARCA1	98	89.458	ENSMODG00000013187	-	99	89.448	Monodelphis_domestica
ENSCANG00000007183	SMARCA1	92	83.436	ENSMALG00000002081	smarca5	97	83.025	Monopterus_albus
ENSCANG00000007183	SMARCA1	100	95.767	MGP_CAROLIEiJ_G0033034	Smarca1	100	95.767	Mus_caroli
ENSCANG00000007183	SMARCA1	100	95.767	ENSMUSG00000031099	Smarca1	100	95.767	Mus_musculus
ENSCANG00000007183	SMARCA1	100	95.861	MGP_PahariEiJ_G0031579	Smarca1	100	95.861	Mus_pahari
ENSCANG00000007183	SMARCA1	100	95.861	MGP_SPRETEiJ_G0034192	Smarca1	100	95.861	Mus_spretus
ENSCANG00000007183	SMARCA1	100	98.131	ENSMPUG00000017423	SMARCA1	95	98.131	Mustela_putorius_furo
ENSCANG00000007183	SMARCA1	100	94.683	ENSMLUG00000029614	SMARCA1	100	94.123	Myotis_lucifugus
ENSCANG00000007183	SMARCA1	98	96.944	ENSNGAG00000006492	Smarca1	99	96.944	Nannospalax_galili
ENSCANG00000007183	SMARCA1	93	83.910	ENSNBRG00000004463	smarca5	99	83.232	Neolamprologus_brichardi
ENSCANG00000007183	SMARCA1	100	99.065	ENSNLEG00000015179	SMARCA1	100	99.065	Nomascus_leucogenys
ENSCANG00000007183	SMARCA1	89	81.933	ENSMEUG00000008819	SMARCA1	99	81.914	Notamacropus_eugenii
ENSCANG00000007183	SMARCA1	98	96.371	ENSODEG00000012163	SMARCA1	99	96.371	Octodon_degus
ENSCANG00000007183	SMARCA1	96	81.354	ENSONIG00000009993	smarca5	95	83.367	Oreochromis_niloticus
ENSCANG00000007183	SMARCA1	92	93.724	ENSOANG00000002862	SMARCA1	100	93.724	Ornithorhynchus_anatinus
ENSCANG00000007183	SMARCA1	100	96.597	ENSOCUG00000001047	SMARCA1	100	96.597	Oryctolagus_cuniculus
ENSCANG00000007183	SMARCA1	92	83.742	ENSORLG00000021998	smarca5	95	82.929	Oryzias_latipes
ENSCANG00000007183	SMARCA1	92	83.845	ENSORLG00020017679	smarca5	95	83.030	Oryzias_latipes_hni
ENSCANG00000007183	SMARCA1	92	83.742	ENSORLG00015017210	smarca5	95	82.828	Oryzias_latipes_hsok
ENSCANG00000007183	SMARCA1	92	83.742	ENSOMEG00000000086	smarca5	95	82.828	Oryzias_melastigma
ENSCANG00000007183	SMARCA1	98	98.281	ENSOGAG00000004399	SMARCA1	99	98.281	Otolemur_garnettii
ENSCANG00000007183	SMARCA1	95	97.236	ENSOARG00000014638	SMARCA1	100	98.776	Ovis_aries
ENSCANG00000007183	SMARCA1	100	99.907	ENSPPAG00000034647	SMARCA1	100	99.907	Pan_paniscus
ENSCANG00000007183	SMARCA1	100	98.582	ENSPPRG00000008929	SMARCA1	100	98.582	Panthera_pardus
ENSCANG00000007183	SMARCA1	95	97.053	ENSPTIG00000000915	SMARCA1	98	97.053	Panthera_tigris_altaica
ENSCANG00000007183	SMARCA1	100	99.907	ENSPTRG00000049876	SMARCA1	100	99.907	Pan_troglodytes
ENSCANG00000007183	SMARCA1	100	99.907	ENSPANG00000003871	SMARCA1	100	99.907	Papio_anubis
ENSCANG00000007183	SMARCA1	89	87.421	ENSPKIG00000013411	smarca1	98	87.227	Paramormyrops_kingsleyae
ENSCANG00000007183	SMARCA1	95	91.708	ENSPSIG00000010101	SMARCA1	100	93.107	Pelodiscus_sinensis
ENSCANG00000007183	SMARCA1	98	96.848	ENSPEMG00000017503	Smarca1	99	96.848	Peromyscus_maniculatus_bairdii
ENSCANG00000007183	SMARCA1	95	92.008	ENSPCIG00000015460	SMARCA1	98	92.092	Phascolarctos_cinereus
ENSCANG00000007183	SMARCA1	92	83.845	ENSPFOG00000007649	smarca5	95	82.929	Poecilia_formosa
ENSCANG00000007183	SMARCA1	92	83.845	ENSPLAG00000003363	smarca5	95	82.929	Poecilia_latipinna
ENSCANG00000007183	SMARCA1	92	83.742	ENSPMEG00000019849	smarca5	95	82.828	Poecilia_mexicana
ENSCANG00000007183	SMARCA1	92	83.742	ENSPREG00000023250	smarca5	95	82.828	Poecilia_reticulata
ENSCANG00000007183	SMARCA1	100	97.164	ENSPPYG00000020703	SMARCA1	100	97.164	Pongo_abelii
ENSCANG00000007183	SMARCA1	77	89.189	ENSPCOG00000020722	SMARCA1	94	93.392	Propithecus_coquereli
ENSCANG00000007183	SMARCA1	92	97.297	ENSPVAG00000003805	SMARCA1	94	97.297	Pteropus_vampyrus
ENSCANG00000007183	SMARCA1	55	84.658	ENSPNYG00000012299	smarca5	92	83.200	Pundamilia_nyererei
ENSCANG00000007183	SMARCA1	100	96.314	ENSRNOG00000003762	Smarca1	100	96.314	Rattus_norvegicus
ENSCANG00000007183	SMARCA1	100	100.000	ENSRROG00000034167	SMARCA1	100	100.000	Rhinopithecus_roxellana
ENSCANG00000007183	SMARCA1	96	98.161	ENSSBOG00000020641	SMARCA1	100	99.694	Saimiri_boliviensis_boliviensis
ENSCANG00000007183	SMARCA1	92	86.639	ENSSHAG00000013518	SMARCA1	99	86.639	Sarcophilus_harrisii
ENSCANG00000007183	SMARCA1	98	85.411	ENSSFOG00015009043	smarca1	98	87.776	Scleropages_formosus
ENSCANG00000007183	SMARCA1	95	82.253	ENSSFOG00015016794	smarca5	100	83.918	Scleropages_formosus
ENSCANG00000007183	SMARCA1	93	82.472	ENSSMAG00000004801	smarca5	95	82.472	Scophthalmus_maximus
ENSCANG00000007183	SMARCA1	93	83.299	ENSSDUG00000020690	smarca5	96	82.626	Seriola_dumerili
ENSCANG00000007183	SMARCA1	93	83.299	ENSSLDG00000025190	smarca5	96	82.626	Seriola_lalandi_dorsalis
ENSCANG00000007183	SMARCA1	85	90.275	ENSSARG00000000842	SMARCA1	92	90.275	Sorex_araneus
ENSCANG00000007183	SMARCA1	92	92.016	ENSSPUG00000000590	SMARCA1	94	92.000	Sphenodon_punctatus
ENSCANG00000007183	SMARCA1	93	83.401	ENSSPAG00000002894	smarca5	97	84.136	Stegastes_partitus
ENSCANG00000007183	SMARCA1	98	97.688	ENSSSCG00000012649	SMARCA1	99	97.688	Sus_scrofa
ENSCANG00000007183	SMARCA1	93	92.668	ENSTGUG00000003899	-	100	92.668	Taeniopygia_guttata
ENSCANG00000007183	SMARCA1	93	83.503	ENSTRUG00000014094	smarca5	95	82.828	Takifugu_rubripes
ENSCANG00000007183	SMARCA1	92	82.684	ENSTNIG00000017717	smarca5	94	81.717	Tetraodon_nigroviridis
ENSCANG00000007183	SMARCA1	92	91.203	ENSTBEG00000014973	SMARCA1	99	91.203	Tupaia_belangeri
ENSCANG00000007183	SMARCA1	92	95.219	ENSTTRG00000006168	SMARCA1	99	95.219	Tursiops_truncatus
ENSCANG00000007183	SMARCA1	100	98.015	ENSUAMG00000020201	SMARCA1	100	98.015	Ursus_americanus
ENSCANG00000007183	SMARCA1	95	93.972	ENSUMAG00000004073	SMARCA1	97	98.540	Ursus_maritimus
ENSCANG00000007183	SMARCA1	77	99.675	ENSVPAG00000010492	-	85	99.675	Vicugna_pacos
ENSCANG00000007183	SMARCA1	95	98.900	ENSVVUG00000008878	SMARCA1	99	98.955	Vulpes_vulpes
ENSCANG00000007183	SMARCA1	94	89.447	ENSXETG00000001526	smarca1	99	89.447	Xenopus_tropicalis
ENSCANG00000007183	SMARCA1	93	83.503	ENSXCOG00000011170	smarca5	98	82.828	Xiphophorus_couchianus
ENSCANG00000007183	SMARCA1	93	83.503	ENSXMAG00000009678	smarca5	97	85.088	Xiphophorus_maculatus