EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000008337 (Gene tree)
Gene ID: 105520872
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 29862 bases
Position: chrKN982575.1:3052507-3082368
Accession: 105520872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000002346	RRM_1	PF00076.22	6.9e-29	1	2
ENSCANP00000002346	RRM_1	PF00076.22	6.9e-29	2	2
ENSCANP00000002262	RRM_1	PF00076.22	7.4e-29	1	2
ENSCANP00000002262	RRM_1	PF00076.22	7.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000009507	RAVER1-201	3577	XM_011954861	ENSCANP00000002262	756 (aa)	XP_011810251	A0A2K5HD39
ENSCANT00000009706	RAVER1-202	2232	-	ENSCANP00000002346	743 (aa)	-	A0A2K5HDD1

Gene Model

Click here to download ENSCANG00000008337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000008337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000008337	RAVER1	64	45.725	ENSCANG00000042311	RAVER2	85	45.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000008337	RAVER1	100	98.545	ENSG00000161847	RAVER1	100	98.545	Homo_sapiens
ENSCANG00000008337	RAVER1	100	91.963	ENSAMEG00000011738	RAVER1	100	91.568	Ailuropoda_melanoleuca
ENSCANG00000008337	RAVER1	76	59.000	ENSAOCG00000005128	raver1	71	76.596	Amphiprion_ocellaris
ENSCANG00000008337	RAVER1	71	83.333	ENSAPEG00000010854	raver1	81	83.333	Amphiprion_percula
ENSCANG00000008337	RAVER1	95	51.503	ENSATEG00000021004	raver1	91	50.481	Anabas_testudineus
ENSCANG00000008337	RAVER1	82	60.809	ENSACAG00000008386	-	91	59.581	Anolis_carolinensis
ENSCANG00000008337	RAVER1	100	95.244	ENSANAG00000028226	RAVER1	100	95.244	Aotus_nancymaae
ENSCANG00000008337	RAVER1	64	60.575	ENSACLG00000018492	raver1	68	57.526	Astatotilapia_calliptera
ENSCANG00000008337	RAVER1	75	87.500	ENSAMXG00000005132	raver1	83	87.500	Astyanax_mexicanus
ENSCANG00000008337	RAVER1	100	90.476	ENSBTAG00000015721	RAVER1	100	96.316	Bos_taurus
ENSCANG00000008337	RAVER1	100	95.244	ENSCJAG00000005671	RAVER1	100	95.244	Callithrix_jacchus
ENSCANG00000008337	RAVER1	100	90.608	ENSCAFG00000017861	RAVER1	100	90.476	Canis_familiaris
ENSCANG00000008337	RAVER1	98	90.392	ENSCAFG00020024449	RAVER1	100	90.257	Canis_lupus_dingo
ENSCANG00000008337	RAVER1	98	89.488	ENSCHIG00000006718	RAVER1	100	89.757	Capra_hircus
ENSCANG00000008337	RAVER1	89	86.074	ENSTSYG00000027107	RAVER1	100	85.778	Carlito_syrichta
ENSCANG00000008337	RAVER1	88	89.521	ENSCAPG00000002269	RAVER1	100	88.922	Cavia_aperea
ENSCANG00000008337	RAVER1	98	90.418	ENSCPOG00000001008	RAVER1	100	90.148	Cavia_porcellus
ENSCANG00000008337	RAVER1	100	96.296	ENSCCAG00000031723	RAVER1	100	96.296	Cebus_capucinus
ENSCANG00000008337	RAVER1	100	99.471	ENSCATG00000043863	RAVER1	100	99.471	Cercocebus_atys
ENSCANG00000008337	RAVER1	98	91.655	ENSCLAG00000009336	RAVER1	100	90.444	Chinchilla_lanigera
ENSCANG00000008337	RAVER1	100	99.471	ENSCSAG00000007317	RAVER1	86	99.471	Chlorocebus_sabaeus
ENSCANG00000008337	RAVER1	94	63.226	ENSCPBG00000005349	-	96	62.323	Chrysemys_picta_bellii
ENSCANG00000008337	RAVER1	98	89.892	ENSCGRG00001013260	-	100	90.431	Cricetulus_griseus_chok1gshd
ENSCANG00000008337	RAVER1	98	89.892	ENSCGRG00000015138	-	100	90.431	Cricetulus_griseus_crigri
ENSCANG00000008337	RAVER1	72	78.846	ENSCSEG00000021092	raver1	75	83.333	Cynoglossus_semilaevis
ENSCANG00000008337	RAVER1	95	50.759	ENSCVAG00000013971	raver1	82	55.706	Cyprinodon_variegatus
ENSCANG00000008337	RAVER1	63	57.231	ENSDARG00000052617	raver1	70	69.643	Danio_rerio
ENSCANG00000008337	RAVER1	98	84.791	ENSDORG00000010106	-	100	83.176	Dipodomys_ordii
ENSCANG00000008337	RAVER1	64	89.394	ENSETEG00000008201	-	70	97.059	Echinops_telfairi
ENSCANG00000008337	RAVER1	64	95.285	ENSEASG00005010544	-	85	95.285	Equus_asinus_asinus
ENSCANG00000008337	RAVER1	100	93.412	ENSECAG00000024966	RAVER1	100	93.281	Equus_caballus
ENSCANG00000008337	RAVER1	96	51.220	ENSELUG00000023287	raver1	93	52.660	Esox_lucius
ENSCANG00000008337	RAVER1	100	93.412	ENSFCAG00000009435	RAVER1	100	92.754	Felis_catus
ENSCANG00000008337	RAVER1	98	90.175	ENSFDAG00000015113	RAVER1	100	89.502	Fukomys_damarensis
ENSCANG00000008337	RAVER1	80	60.532	ENSGMOG00000003649	raver1	75	85.417	Gadus_morhua
ENSCANG00000008337	RAVER1	65	45.783	ENSGALG00000050608	-	53	44.727	Gallus_gallus
ENSCANG00000008337	RAVER1	99	50.525	ENSGAFG00000015944	raver1	73	78.846	Gambusia_affinis
ENSCANG00000008337	RAVER1	94	63.588	ENSGAGG00000011748	-	96	78.144	Gopherus_agassizii
ENSCANG00000008337	RAVER1	100	98.280	ENSGGOG00000006015	RAVER1	100	98.280	Gorilla_gorilla
ENSCANG00000008337	RAVER1	93	50.899	ENSHBUG00000021210	raver1	68	60.905	Haplochromis_burtoni
ENSCANG00000008337	RAVER1	98	90.444	ENSHGLG00000015460	RAVER1	100	90.040	Heterocephalus_glaber_female
ENSCANG00000008337	RAVER1	98	90.444	ENSHGLG00100000812	RAVER1	100	90.040	Heterocephalus_glaber_male
ENSCANG00000008337	RAVER1	95	52.885	ENSIPUG00000013153	raver1	89	57.013	Ictalurus_punctatus
ENSCANG00000008337	RAVER1	98	92.848	ENSSTOG00000003241	RAVER1	100	92.713	Ictidomys_tridecemlineatus
ENSCANG00000008337	RAVER1	98	90.872	ENSJJAG00000018219	-	100	90.872	Jaculus_jaculus
ENSCANG00000008337	RAVER1	96	51.289	ENSKMAG00000017355	raver1	67	58.929	Kryptolebias_marmoratus
ENSCANG00000008337	RAVER1	67	58.974	ENSLBEG00000008268	raver1	70	58.974	Labrus_bergylta
ENSCANG00000008337	RAVER1	88	61.484	ENSLACG00000005809	-	99	61.966	Latimeria_chalumnae
ENSCANG00000008337	RAVER1	94	56.545	ENSLOCG00000007500	raver1	92	55.811	Lepisosteus_oculatus
ENSCANG00000008337	RAVER1	98	91.386	ENSLAFG00000003664	-	100	91.790	Loxodonta_africana
ENSCANG00000008337	RAVER1	100	98.942	ENSMFAG00000037977	RAVER1	100	98.942	Macaca_fascicularis
ENSCANG00000008337	RAVER1	100	99.206	ENSMMUG00000014897	RAVER1	100	99.206	Macaca_mulatta
ENSCANG00000008337	RAVER1	100	99.206	ENSMNEG00000028390	RAVER1	100	99.206	Macaca_nemestrina
ENSCANG00000008337	RAVER1	100	99.206	ENSMLEG00000041959	RAVER1	100	99.206	Mandrillus_leucophaeus
ENSCANG00000008337	RAVER1	72	83.333	ENSMAMG00000012059	raver1	77	83.333	Mastacembelus_armatus
ENSCANG00000008337	RAVER1	70	85.417	ENSMZEG00005019002	raver1	75	85.417	Maylandia_zebra
ENSCANG00000008337	RAVER1	98	89.247	ENSMAUG00000017948	-	100	88.978	Mesocricetus_auratus
ENSCANG00000008337	RAVER1	99	91.921	ENSMICG00000010326	RAVER1	99	92.185	Microcebus_murinus
ENSCANG00000008337	RAVER1	98	90.431	ENSMOCG00000015553	-	100	90.162	Microtus_ochrogaster
ENSCANG00000008337	RAVER1	95	51.226	ENSMMOG00000012093	raver1	75	85.417	Mola_mola
ENSCANG00000008337	RAVER1	96	77.446	ENSMODG00000005584	-	91	77.402	Monodelphis_domestica
ENSCANG00000008337	RAVER1	98	88.235	MGP_CAROLIEiJ_G0031860	-	100	88.770	Mus_caroli
ENSCANG00000008337	RAVER1	98	88.369	ENSMUSG00000010205	Raver1	100	88.904	Mus_musculus
ENSCANG00000008337	RAVER1	98	86.968	MGP_PahariEiJ_G0014726	-	100	88.298	Mus_pahari
ENSCANG00000008337	RAVER1	98	88.235	MGP_SPRETEiJ_G0032984	-	100	88.770	Mus_spretus
ENSCANG00000008337	RAVER1	100	93.412	ENSMPUG00000006712	RAVER1	100	93.281	Mustela_putorius_furo
ENSCANG00000008337	RAVER1	98	89.986	ENSMLUG00000012328	RAVER1	100	90.122	Myotis_lucifugus
ENSCANG00000008337	RAVER1	98	89.459	ENSNGAG00000001260	-	100	89.459	Nannospalax_galili
ENSCANG00000008337	RAVER1	65	50.716	ENSNBRG00000010139	raver1	65	52.245	Neolamprologus_brichardi
ENSCANG00000008337	RAVER1	100	97.751	ENSNLEG00000012181	RAVER1	100	97.751	Nomascus_leucogenys
ENSCANG00000008337	RAVER1	88	75.672	ENSMEUG00000003281	-	100	74.294	Notamacropus_eugenii
ENSCANG00000008337	RAVER1	50	89.062	ENSOPRG00000005855	-	51	85.271	Ochotona_princeps
ENSCANG00000008337	RAVER1	98	91.790	ENSODEG00000016260	RAVER1	100	90.579	Octodon_degus
ENSCANG00000008337	RAVER1	94	50.836	ENSONIG00000001559	raver1	72	70.982	Oreochromis_niloticus
ENSCANG00000008337	RAVER1	100	85.847	ENSOCUG00000020918	RAVER1	100	84.656	Oryctolagus_cuniculus
ENSCANG00000008337	RAVER1	66	66.998	ENSORLG00000005458	raver1	67	66.998	Oryzias_latipes
ENSCANG00000008337	RAVER1	69	67.246	ENSORLG00020004392	raver1	67	67.246	Oryzias_latipes_hni
ENSCANG00000008337	RAVER1	66	66.998	ENSORLG00015017222	raver1	67	66.998	Oryzias_latipes_hsok
ENSCANG00000008337	RAVER1	60	81.633	ENSOMEG00000023956	raver1	67	83.333	Oryzias_melastigma
ENSCANG00000008337	RAVER1	100	92.989	ENSOGAG00000011071	RAVER1	100	91.799	Otolemur_garnettii
ENSCANG00000008337	RAVER1	100	89.065	ENSOARG00000015886	RAVER1	100	89.196	Ovis_aries
ENSCANG00000008337	RAVER1	100	98.545	ENSPPAG00000002611	RAVER1	100	98.545	Pan_paniscus
ENSCANG00000008337	RAVER1	100	93.808	ENSPPRG00000009912	RAVER1	100	93.149	Panthera_pardus
ENSCANG00000008337	RAVER1	100	98.545	ENSPTRG00000010466	RAVER1	100	98.545	Pan_troglodytes
ENSCANG00000008337	RAVER1	100	99.339	ENSPANG00000004122	RAVER1	100	99.339	Papio_anubis
ENSCANG00000008337	RAVER1	98	90.175	ENSPEMG00000016411	-	100	90.310	Peromyscus_maniculatus_bairdii
ENSCANG00000008337	RAVER1	98	78.284	ENSPCIG00000018695	-	100	77.882	Phascolarctos_cinereus
ENSCANG00000008337	RAVER1	94	51.918	ENSPFOG00000007016	raver1	66	59.481	Poecilia_formosa
ENSCANG00000008337	RAVER1	69	83.333	ENSPLAG00000020793	raver1	74	83.333	Poecilia_latipinna
ENSCANG00000008337	RAVER1	95	52.660	ENSPMEG00000011220	raver1	68	67.980	Poecilia_mexicana
ENSCANG00000008337	RAVER1	70	88.372	ENSPREG00000006864	raver1	76	88.372	Poecilia_reticulata
ENSCANG00000008337	RAVER1	100	97.487	ENSPPYG00000010514	RAVER1	85	97.487	Pongo_abelii
ENSCANG00000008337	RAVER1	100	93.298	ENSPCOG00000026605	RAVER1	100	92.904	Propithecus_coquereli
ENSCANG00000008337	RAVER1	98	92.963	ENSPVAG00000003689	RAVER1	100	91.746	Pteropus_vampyrus
ENSCANG00000008337	RAVER1	58	85.417	ENSPNYG00000013284	raver1	63	85.417	Pundamilia_nyererei
ENSCANG00000008337	RAVER1	94	51.872	ENSPNAG00000015476	raver1	67	60.080	Pygocentrus_nattereri
ENSCANG00000008337	RAVER1	98	88.636	ENSRNOG00000020710	Raver1	100	88.636	Rattus_norvegicus
ENSCANG00000008337	RAVER1	100	99.339	ENSRBIG00000034702	RAVER1	100	99.339	Rhinopithecus_bieti
ENSCANG00000008337	RAVER1	100	99.462	ENSRROG00000031186	RAVER1	100	99.462	Rhinopithecus_roxellana
ENSCANG00000008337	RAVER1	100	92.857	ENSSBOG00000023423	RAVER1	100	92.593	Saimiri_boliviensis_boliviensis
ENSCANG00000008337	RAVER1	88	77.367	ENSSHAG00000008181	-	90	76.923	Sarcophilus_harrisii
ENSCANG00000008337	RAVER1	95	49.264	ENSSDUG00000021063	raver1	79	83.333	Seriola_dumerili
ENSCANG00000008337	RAVER1	65	59.960	ENSSLDG00000014505	raver1	66	59.960	Seriola_lalandi_dorsalis
ENSCANG00000008337	RAVER1	54	83.333	ENSSPAG00000000688	raver1	84	56.900	Stegastes_partitus
ENSCANG00000008337	RAVER1	100	92.734	ENSSSCG00000013650	-	100	92.074	Sus_scrofa
ENSCANG00000008337	RAVER1	94	51.040	ENSTRUG00000025641	raver1	65	59.426	Takifugu_rubripes
ENSCANG00000008337	RAVER1	98	91.881	ENSTTRG00000009552	RAVER1	100	91.069	Tursiops_truncatus
ENSCANG00000008337	RAVER1	100	93.544	ENSUAMG00000020385	RAVER1	100	93.149	Ursus_americanus
ENSCANG00000008337	RAVER1	100	90.608	ENSVVUG00000028976	RAVER1	100	90.476	Vulpes_vulpes
ENSCANG00000008337	RAVER1	98	56.225	ENSXETG00000011622	raver1	100	54.605	Xenopus_tropicalis
ENSCANG00000008337	RAVER1	97	51.409	ENSXCOG00000016368	raver1	80	59.449	Xiphophorus_couchianus
ENSCANG00000008337	RAVER1	97	50.200	ENSXMAG00000000217	raver1	80	59.528	Xiphophorus_maculatus