EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000011473 (Gene tree)
Gene ID: 105508414
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 1149 bases
Position: chrKN980063.1:9015638-9016786
Accession: 105508414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000003163	RRM_5	PF13893.6	4.7e-13	1	2
ENSCANP00000003163	RRM_5	PF13893.6	4.7e-13	2	2
ENSCANP00000003163	RRM_1	PF00076.22	3.3e-77	1	4
ENSCANP00000003163	RRM_1	PF00076.22	3.3e-77	2	4
ENSCANP00000003163	RRM_1	PF00076.22	3.3e-77	3	4
ENSCANP00000003163	RRM_1	PF00076.22	3.3e-77	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000012787	PABPC5-201	1149	XM_011937281	ENSCANP00000003163	382 (aa)	XP_011792671	A0A2K5HFN1

Gene Model

Click here to download ENSCANG00000011473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000011473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000011473	PABPC5	96	59.504	ENSCANG00000037530	PABPC1L	62	59.551
ENSCANG00000011473	PABPC5	96	63.710	ENSCANG00000036233	-	96	63.900
ENSCANG00000011473	PABPC5	70	33.333	ENSCANG00000038452	-	52	33.333
ENSCANG00000011473	PABPC5	83	32.335	ENSCANG00000025310	NONO	51	33.333
ENSCANG00000011473	PABPC5	95	67.222	ENSCANG00000034177	PABPC4	61	67.135
ENSCANG00000011473	PABPC5	95	60.331	ENSCANG00000041712	PABPC3	58	60.393
ENSCANG00000011473	PABPC5	94	35.802	ENSCANG00000043179	ELAVL2	89	35.802
ENSCANG00000011473	PABPC5	96	59.890	ENSCANG00000037677	PABPC4L	98	59.831
ENSCANG00000011473	PABPC5	95	65.161	ENSCANG00000021524	PABPC1	64	65.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000011473	PABPC5	100	99.738	ENSG00000174740	PABPC5	100	99.738	Homo_sapiens
ENSCANG00000011473	PABPC5	99	97.375	ENSAMEG00000020114	PABPC5	100	97.375	Ailuropoda_melanoleuca
ENSCANG00000011473	PABPC5	100	99.738	ENSANAG00000005063	PABPC5	100	99.738	Aotus_nancymaae
ENSCANG00000011473	PABPC5	99	96.588	ENSBTAG00000019942	PABPC5	99	96.588	Bos_taurus
ENSCANG00000011473	PABPC5	100	99.215	ENSCJAG00000003665	PABPC5	100	99.215	Callithrix_jacchus
ENSCANG00000011473	PABPC5	99	96.850	ENSCAFG00000017452	PABPC5	99	96.850	Canis_familiaris
ENSCANG00000011473	PABPC5	99	96.588	ENSCHIG00000019004	PABPC5	99	96.588	Capra_hircus
ENSCANG00000011473	PABPC5	99	97.638	ENSTSYG00000036351	PABPC5	99	97.638	Carlito_syrichta
ENSCANG00000011473	PABPC5	99	88.421	ENSCAPG00000010714	PABPC5	99	88.421	Cavia_aperea
ENSCANG00000011473	PABPC5	99	94.488	ENSCPOG00000002555	PABPC5	99	94.488	Cavia_porcellus
ENSCANG00000011473	PABPC5	100	99.738	ENSCCAG00000032154	PABPC5	100	99.738	Cebus_capucinus
ENSCANG00000011473	PABPC5	100	100.000	ENSCATG00000043083	PABPC5	100	100.000	Cercocebus_atys
ENSCANG00000011473	PABPC5	99	95.801	ENSCLAG00000000647	PABPC5	99	95.801	Chinchilla_lanigera
ENSCANG00000011473	PABPC5	100	100.000	ENSCSAG00000000065	PABPC5	100	100.000	Chlorocebus_sabaeus
ENSCANG00000011473	PABPC5	99	94.488	ENSCGRG00000018699	Pabpc5	99	94.488	Cricetulus_griseus_crigri
ENSCANG00000011473	PABPC5	99	78.534	ENSETEG00000011832	PABPC5	99	78.534	Echinops_telfairi
ENSCANG00000011473	PABPC5	99	97.375	ENSEASG00005014396	PABPC5	99	97.375	Equus_asinus_asinus
ENSCANG00000011473	PABPC5	99	97.375	ENSECAG00000003452	PABPC5	99	97.375	Equus_caballus
ENSCANG00000011473	PABPC5	99	97.113	ENSFCAG00000004998	PABPC5	99	97.113	Felis_catus
ENSCANG00000011473	PABPC5	99	96.325	ENSFDAG00000000126	PABPC5	99	96.325	Fukomys_damarensis
ENSCANG00000011473	PABPC5	100	99.738	ENSGGOG00000007622	PABPC5	100	99.738	Gorilla_gorilla
ENSCANG00000011473	PABPC5	95	97.235	ENSJJAG00000011960	Pabpc5	99	97.235	Jaculus_jaculus
ENSCANG00000011473	PABPC5	100	100.000	ENSMFAG00000024561	PABPC5	100	100.000	Macaca_fascicularis
ENSCANG00000011473	PABPC5	100	100.000	ENSMMUG00000011562	PABPC5	100	100.000	Macaca_mulatta
ENSCANG00000011473	PABPC5	100	100.000	ENSMNEG00000037604	PABPC5	100	100.000	Macaca_nemestrina
ENSCANG00000011473	PABPC5	100	100.000	ENSMLEG00000028318	PABPC5	100	100.000	Mandrillus_leucophaeus
ENSCANG00000011473	PABPC5	99	96.325	ENSMICG00000041706	PABPC5	99	96.325	Microcebus_murinus
ENSCANG00000011473	PABPC5	99	95.801	ENSMOCG00000001554	Pabpc5	99	95.801	Microtus_ochrogaster
ENSCANG00000011473	PABPC5	99	94.723	MGP_CAROLIEiJ_G0033367	Pabpc5	99	94.723	Mus_caroli
ENSCANG00000011473	PABPC5	99	95.251	ENSMUSG00000034732	Pabpc5	99	95.251	Mus_musculus
ENSCANG00000011473	PABPC5	99	95.538	MGP_PahariEiJ_G0031908	Pabpc5	99	95.538	Mus_pahari
ENSCANG00000011473	PABPC5	99	95.251	MGP_SPRETEiJ_G0034533	Pabpc5	99	95.251	Mus_spretus
ENSCANG00000011473	PABPC5	99	96.588	ENSMPUG00000018465	PABPC5	99	96.588	Mustela_putorius_furo
ENSCANG00000011473	PABPC5	99	96.063	ENSMLUG00000008244	PABPC5	99	96.063	Myotis_lucifugus
ENSCANG00000011473	PABPC5	95	96.313	ENSNGAG00000004371	Pabpc5	99	96.313	Nannospalax_galili
ENSCANG00000011473	PABPC5	100	99.738	ENSNLEG00000035086	PABPC5	100	99.738	Nomascus_leucogenys
ENSCANG00000011473	PABPC5	98	97.285	ENSOPRG00000000856	PABPC5	100	97.285	Ochotona_princeps
ENSCANG00000011473	PABPC5	99	97.638	ENSOCUG00000010919	PABPC5	99	97.638	Oryctolagus_cuniculus
ENSCANG00000011473	PABPC5	99	96.850	ENSOGAG00000006882	PABPC5	99	96.850	Otolemur_garnettii
ENSCANG00000011473	PABPC5	99	96.850	ENSOARG00000010260	PABPC5	99	96.850	Ovis_aries
ENSCANG00000011473	PABPC5	100	99.476	ENSPPAG00000007378	PABPC5	100	99.476	Pan_paniscus
ENSCANG00000011473	PABPC5	99	97.113	ENSPPRG00000010742	PABPC5	99	97.113	Panthera_pardus
ENSCANG00000011473	PABPC5	99	97.113	ENSPTIG00000001480	PABPC5	99	97.113	Panthera_tigris_altaica
ENSCANG00000011473	PABPC5	100	99.738	ENSPTRG00000022078	PABPC5	100	99.738	Pan_troglodytes
ENSCANG00000011473	PABPC5	100	100.000	ENSPANG00000018282	PABPC5	100	100.000	Papio_anubis
ENSCANG00000011473	PABPC5	99	95.276	ENSPEMG00000000171	Pabpc5	99	95.276	Peromyscus_maniculatus_bairdii
ENSCANG00000011473	PABPC5	100	99.738	ENSPPYG00000020526	PABPC5	100	99.738	Pongo_abelii
ENSCANG00000011473	PABPC5	99	97.091	ENSPCAG00000015577	PABPC5	100	97.091	Procavia_capensis
ENSCANG00000011473	PABPC5	99	97.113	ENSPCOG00000000676	PABPC5	99	97.113	Propithecus_coquereli
ENSCANG00000011473	PABPC5	99	97.113	ENSPVAG00000006465	PABPC5	99	97.113	Pteropus_vampyrus
ENSCANG00000011473	PABPC5	99	95.801	ENSRNOG00000003354	Pabpc5	99	95.801	Rattus_norvegicus
ENSCANG00000011473	PABPC5	100	100.000	ENSRBIG00000011760	PABPC5	100	100.000	Rhinopithecus_bieti
ENSCANG00000011473	PABPC5	100	100.000	ENSRROG00000036708	PABPC5	100	100.000	Rhinopithecus_roxellana
ENSCANG00000011473	PABPC5	100	99.476	ENSSBOG00000008658	PABPC5	100	99.476	Saimiri_boliviensis_boliviensis
ENSCANG00000011473	PABPC5	99	94.488	ENSSARG00000014012	PABPC5	99	94.488	Sorex_araneus
ENSCANG00000011473	PABPC5	99	97.113	ENSSSCG00000040194	PABPC5	99	97.113	Sus_scrofa
ENSCANG00000011473	PABPC5	99	98.425	ENSTBEG00000016482	PABPC5	99	98.425	Tupaia_belangeri
ENSCANG00000011473	PABPC5	99	96.850	ENSUAMG00000013627	PABPC5	99	96.850	Ursus_americanus
ENSCANG00000011473	PABPC5	99	96.588	ENSUMAG00000023934	PABPC5	99	96.588	Ursus_maritimus
ENSCANG00000011473	PABPC5	99	97.113	ENSVPAG00000001063	PABPC5	99	97.113	Vicugna_pacos
ENSCANG00000011473	PABPC5	99	97.113	ENSVVUG00000013172	PABPC5	99	97.113	Vulpes_vulpes