EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000012540 (Gene tree)
Gene ID: 105516565
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 52846 bases
Position: chrKN979463.1:1132276-1185121
Accession: 105516565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000003534	DUF1604	PF07713.13	4.2e-12	1	1
ENSCANP00000003534	G-patch	PF01585.23	6.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000014030	GPATCH1-201	2364	XM_011948821	ENSCANP00000003534	787 (aa)	XP_011804211	A0A2K5HGR2

Gene Model

Click here to download ENSCANG00000012540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000012540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000012540	GPATCH1	100	96.543	ENSG00000076650	GPATCH1	90	96.543	Homo_sapiens
ENSCANG00000012540	GPATCH1	100	87.438	ENSAMEG00000015575	GPATCH1	94	87.438	Ailuropoda_melanoleuca
ENSCANG00000012540	GPATCH1	78	55.230	ENSAOCG00000006668	gpatch1	79	50.577	Amphiprion_ocellaris
ENSCANG00000012540	GPATCH1	78	54.661	ENSAPEG00000000026	gpatch1	80	50.694	Amphiprion_percula
ENSCANG00000012540	GPATCH1	88	49.537	ENSATEG00000014494	gpatch1	79	50.231	Anabas_testudineus
ENSCANG00000012540	GPATCH1	88	71.547	ENSAPLG00000007584	GPATCH1	80	71.350	Anas_platyrhynchos
ENSCANG00000012540	GPATCH1	100	94.321	ENSANAG00000027002	GPATCH1	93	94.321	Aotus_nancymaae
ENSCANG00000012540	GPATCH1	78	52.191	ENSACLG00000024740	gpatch1	71	50.812	Astatotilapia_calliptera
ENSCANG00000012540	GPATCH1	89	53.828	ENSAMXG00000020177	gpatch1	89	50.205	Astyanax_mexicanus
ENSCANG00000012540	GPATCH1	90	85.139	ENSBTAG00000000721	GPATCH1	90	85.185	Bos_taurus
ENSCANG00000012540	GPATCH1	100	93.827	ENSCJAG00000000684	GPATCH1	93	93.827	Callithrix_jacchus
ENSCANG00000012540	GPATCH1	100	86.700	ENSCAFG00000007457	GPATCH1	79	86.700	Canis_familiaris
ENSCANG00000012540	GPATCH1	93	85.879	ENSCAFG00020019731	GPATCH1	85	85.494	Canis_lupus_dingo
ENSCANG00000012540	GPATCH1	99	84.848	ENSCHIG00000019626	GPATCH1	90	84.938	Capra_hircus
ENSCANG00000012540	GPATCH1	97	84.450	ENSCAPG00000008827	GPATCH1	86	84.450	Cavia_aperea
ENSCANG00000012540	GPATCH1	96	88.122	ENSCPOG00000024477	GPATCH1	89	88.122	Cavia_porcellus
ENSCANG00000012540	GPATCH1	100	94.074	ENSCCAG00000024676	GPATCH1	93	94.074	Cebus_capucinus
ENSCANG00000012540	GPATCH1	100	97.778	ENSCATG00000043637	GPATCH1	90	97.778	Cercocebus_atys
ENSCANG00000012540	GPATCH1	96	89.189	ENSCLAG00000003395	-	77	89.189	Chinchilla_lanigera
ENSCANG00000012540	GPATCH1	100	97.284	ENSCSAG00000004743	GPATCH1	90	97.284	Chlorocebus_sabaeus
ENSCANG00000012540	GPATCH1	97	74.510	ENSCHOG00000012865	GPATCH1	82	82.540	Choloepus_hoffmanni
ENSCANG00000012540	GPATCH1	82	73.021	ENSCPBG00000000666	GPATCH1	82	69.806	Chrysemys_picta_bellii
ENSCANG00000012540	GPATCH1	82	38.387	ENSCING00000012518	-	70	38.264	Ciona_intestinalis
ENSCANG00000012540	GPATCH1	97	87.838	ENSCGRG00001016736	Gpatch1	86	87.838	Cricetulus_griseus_chok1gshd
ENSCANG00000012540	GPATCH1	92	74.114	ENSCGRG00000005069	Gpatch1	76	72.973	Cricetulus_griseus_crigri
ENSCANG00000012540	GPATCH1	88	38.889	ENSCSEG00000019456	-	95	39.898	Cynoglossus_semilaevis
ENSCANG00000012540	GPATCH1	88	50.233	ENSDARG00000033418	gpatch1	80	50.233	Danio_rerio
ENSCANG00000012540	GPATCH1	90	81.231	ENSDNOG00000005291	GPATCH1	89	81.231	Dasypus_novemcinctus
ENSCANG00000012540	GPATCH1	88	80.692	ENSDORG00000012546	Gpatch1	81	80.247	Dipodomys_ordii
ENSCANG00000012540	GPATCH1	99	75.291	ENSETEG00000003626	GPATCH1	82	75.291	Echinops_telfairi
ENSCANG00000012540	GPATCH1	93	35.262	ENSEBUG00000011286	gpatch1	81	38.006	Eptatretus_burgeri
ENSCANG00000012540	GPATCH1	89	83.386	ENSEASG00005021162	GPATCH1	83	84.643	Equus_asinus_asinus
ENSCANG00000012540	GPATCH1	93	84.726	ENSECAG00000022743	GPATCH1	79	84.568	Equus_caballus
ENSCANG00000012540	GPATCH1	68	80.488	ENSEEUG00000012925	GPATCH1	63	80.488	Erinaceus_europaeus
ENSCANG00000012540	GPATCH1	96	56.044	ENSELUG00000018195	gpatch1	86	49.550	Esox_lucius
ENSCANG00000012540	GPATCH1	100	83.990	ENSFCAG00000014917	GPATCH1	90	83.498	Felis_catus
ENSCANG00000012540	GPATCH1	99	59.838	ENSFALG00000007821	GPATCH1	81	62.826	Ficedula_albicollis
ENSCANG00000012540	GPATCH1	96	87.568	ENSFDAG00000003871	GPATCH1	88	83.668	Fukomys_damarensis
ENSCANG00000012540	GPATCH1	91	62.914	ENSGALG00000004839	GPATCH1	84	62.914	Gallus_gallus
ENSCANG00000012540	GPATCH1	89	48.338	ENSGACG00000017544	gpatch1	84	48.338	Gasterosteus_aculeatus
ENSCANG00000012540	GPATCH1	97	70.103	ENSGAGG00000010067	GPATCH1	86	69.643	Gopherus_agassizii
ENSCANG00000012540	GPATCH1	97	97.284	ENSGGOG00000010862	GPATCH1	85	97.284	Gorilla_gorilla
ENSCANG00000012540	GPATCH1	78	53.226	ENSHBUG00000023462	gpatch1	80	51.044	Haplochromis_burtoni
ENSCANG00000012540	GPATCH1	100	78.922	ENSHGLG00000009334	GPATCH1	90	79.657	Heterocephalus_glaber_female
ENSCANG00000012540	GPATCH1	100	78.922	ENSHGLG00100018074	GPATCH1	90	79.657	Heterocephalus_glaber_male
ENSCANG00000012540	GPATCH1	92	50.102	ENSIPUG00000014977	gpatch1	78	54.545	Ictalurus_punctatus
ENSCANG00000012540	GPATCH1	100	84.767	ENSSTOG00000003720	GPATCH1	93	84.767	Ictidomys_tridecemlineatus
ENSCANG00000012540	GPATCH1	90	80.092	ENSJJAG00000023765	Gpatch1	90	80.092	Jaculus_jaculus
ENSCANG00000012540	GPATCH1	87	51.972	ENSKMAG00000017950	gpatch1	79	51.494	Kryptolebias_marmoratus
ENSCANG00000012540	GPATCH1	78	52.209	ENSLBEG00000026527	gpatch1	77	51.487	Labrus_bergylta
ENSCANG00000012540	GPATCH1	87	66.298	ENSLACG00000008130	GPATCH1	84	59.845	Latimeria_chalumnae
ENSCANG00000012540	GPATCH1	99	56.148	ENSLOCG00000001800	gpatch1	81	56.148	Lepisosteus_oculatus
ENSCANG00000012540	GPATCH1	98	84.733	ENSLAFG00000013589	GPATCH1	93	83.251	Loxodonta_africana
ENSCANG00000012540	GPATCH1	89	95.625	ENSMFAG00000034418	GPATCH1	86	95.625	Macaca_fascicularis
ENSCANG00000012540	GPATCH1	100	97.291	ENSMMUG00000011790	GPATCH1	90	97.291	Macaca_mulatta
ENSCANG00000012540	GPATCH1	100	97.531	ENSMNEG00000045084	GPATCH1	90	97.531	Macaca_nemestrina
ENSCANG00000012540	GPATCH1	100	97.531	ENSMLEG00000043840	GPATCH1	89	97.531	Mandrillus_leucophaeus
ENSCANG00000012540	GPATCH1	78	52.191	ENSMZEG00005001926	gpatch1	71	50.735	Maylandia_zebra
ENSCANG00000012540	GPATCH1	89	63.063	ENSMGAG00000005775	GPATCH1	82	63.063	Meleagris_gallopavo
ENSCANG00000012540	GPATCH1	89	82.188	ENSMICG00000004829	GPATCH1	87	84.062	Microcebus_murinus
ENSCANG00000012540	GPATCH1	99	78.719	ENSMOCG00000000174	Gpatch1	90	78.719	Microtus_ochrogaster
ENSCANG00000012540	GPATCH1	77	51.145	ENSMMOG00000002140	gpatch1	76	51.136	Mola_mola
ENSCANG00000012540	GPATCH1	100	74.429	ENSMODG00000012226	GPATCH1	93	72.138	Monodelphis_domestica
ENSCANG00000012540	GPATCH1	99	50.117	ENSMALG00000014386	gpatch1	82	50.351	Monopterus_albus
ENSCANG00000012540	GPATCH1	100	79.557	ENSMUSG00000063808	Gpatch1	90	79.557	Mus_musculus
ENSCANG00000012540	GPATCH1	100	78.870	MGP_PahariEiJ_G0012816	Gpatch1	90	78.870	Mus_pahari
ENSCANG00000012540	GPATCH1	100	78.719	MGP_SPRETEiJ_G0030681	Gpatch1	90	79.361	Mus_spretus
ENSCANG00000012540	GPATCH1	100	84.729	ENSMPUG00000007658	GPATCH1	94	84.729	Mustela_putorius_furo
ENSCANG00000012540	GPATCH1	100	85.679	ENSMLUG00000012161	GPATCH1	90	85.679	Myotis_lucifugus
ENSCANG00000012540	GPATCH1	100	79.863	ENSNGAG00000012455	Gpatch1	90	79.863	Nannospalax_galili
ENSCANG00000012540	GPATCH1	100	96.543	ENSNLEG00000007659	GPATCH1	90	96.543	Nomascus_leucogenys
ENSCANG00000012540	GPATCH1	70	74.300	ENSMEUG00000015174	GPATCH1	64	74.300	Notamacropus_eugenii
ENSCANG00000012540	GPATCH1	99	79.405	ENSODEG00000007103	GPATCH1	90	79.405	Octodon_degus
ENSCANG00000012540	GPATCH1	89	51.039	ENSONIG00000003302	gpatch1	82	51.039	Oreochromis_niloticus
ENSCANG00000012540	GPATCH1	99	74.178	ENSOANG00000012732	GPATCH1	89	74.178	Ornithorhynchus_anatinus
ENSCANG00000012540	GPATCH1	100	83.744	ENSOCUG00000015905	GPATCH1	90	83.744	Oryctolagus_cuniculus
ENSCANG00000012540	GPATCH1	88	50.159	ENSORLG00000018706	gpatch1	78	50.159	Oryzias_latipes
ENSCANG00000012540	GPATCH1	88	48.758	ENSOMEG00000022688	gpatch1	79	51.713	Oryzias_melastigma
ENSCANG00000012540	GPATCH1	82	87.170	ENSOGAG00000004016	GPATCH1	87	90.079	Otolemur_garnettii
ENSCANG00000012540	GPATCH1	89	85.449	ENSOARG00000004365	GPATCH1	93	85.185	Ovis_aries
ENSCANG00000012540	GPATCH1	100	96.790	ENSPPAG00000020990	GPATCH1	90	96.790	Pan_paniscus
ENSCANG00000012540	GPATCH1	100	84.729	ENSPPRG00000017245	GPATCH1	93	84.236	Panthera_pardus
ENSCANG00000012540	GPATCH1	100	86.207	ENSPTIG00000019649	GPATCH1	93	85.714	Panthera_tigris_altaica
ENSCANG00000012540	GPATCH1	100	96.296	ENSPTRG00000010803	GPATCH1	90	96.296	Pan_troglodytes
ENSCANG00000012540	GPATCH1	90	96.914	ENSPANG00000012374	GPATCH1	85	96.914	Papio_anubis
ENSCANG00000012540	GPATCH1	78	59.917	ENSPKIG00000020745	gpatch1	62	60.000	Paramormyrops_kingsleyae
ENSCANG00000012540	GPATCH1	100	62.168	ENSPSIG00000013433	GPATCH1	92	62.306	Pelodiscus_sinensis
ENSCANG00000012540	GPATCH1	100	78.519	ENSPEMG00000000636	Gpatch1	94	77.037	Peromyscus_maniculatus_bairdii
ENSCANG00000012540	GPATCH1	87	82.703	ENSPCIG00000021003	GPATCH1	80	82.703	Phascolarctos_cinereus
ENSCANG00000012540	GPATCH1	65	54.487	ENSPREG00000008264	gpatch1	87	43.779	Poecilia_reticulata
ENSCANG00000012540	GPATCH1	100	95.802	ENSPPYG00000009824	GPATCH1	90	95.802	Pongo_abelii
ENSCANG00000012540	GPATCH1	80	82.209	ENSPCAG00000005931	GPATCH1	82	83.005	Procavia_capensis
ENSCANG00000012540	GPATCH1	92	82.192	ENSPCOG00000009674	GPATCH1	86	82.192	Propithecus_coquereli
ENSCANG00000012540	GPATCH1	79	93.000	ENSPVAG00000017767	GPATCH1	82	93.000	Pteropus_vampyrus
ENSCANG00000012540	GPATCH1	65	73.438	ENSPNYG00000018189	gpatch1	77	53.659	Pundamilia_nyererei
ENSCANG00000012540	GPATCH1	90	52.914	ENSPNAG00000013187	gpatch1	77	52.914	Pygocentrus_nattereri
ENSCANG00000012540	GPATCH1	100	78.490	ENSRNOG00000011584	Gpatch1	90	78.490	Rattus_norvegicus
ENSCANG00000012540	GPATCH1	100	94.074	ENSRBIG00000034723	GPATCH1	90	94.074	Rhinopithecus_bieti
ENSCANG00000012540	GPATCH1	100	97.778	ENSRROG00000024428	GPATCH1	90	97.778	Rhinopithecus_roxellana
ENSCANG00000012540	GPATCH1	100	92.346	ENSSBOG00000034650	GPATCH1	93	92.593	Saimiri_boliviensis_boliviensis
ENSCANG00000012540	GPATCH1	99	72.831	ENSSHAG00000016016	GPATCH1	90	73.288	Sarcophilus_harrisii
ENSCANG00000012540	GPATCH1	78	55.785	ENSSFOG00015011535	gpatch1	84	49.695	Scleropages_formosus
ENSCANG00000012540	GPATCH1	78	54.274	ENSSMAG00000002883	gpatch1	78	48.966	Scophthalmus_maximus
ENSCANG00000012540	GPATCH1	78	53.629	ENSSDUG00000007444	gpatch1	79	50.114	Seriola_dumerili
ENSCANG00000012540	GPATCH1	65	73.643	ENSSLDG00000002856	gpatch1	81	49.886	Seriola_lalandi_dorsalis
ENSCANG00000012540	GPATCH1	67	89.796	ENSSARG00000004108	GPATCH1	63	89.796	Sorex_araneus
ENSCANG00000012540	GPATCH1	90	84.211	ENSSSCG00000002865	GPATCH1	84	84.211	Sus_scrofa
ENSCANG00000012540	GPATCH1	99	63.355	ENSTGUG00000009401	GPATCH1	83	63.355	Taeniopygia_guttata
ENSCANG00000012540	GPATCH1	77	54.701	ENSTRUG00000025081	gpatch1	80	46.977	Takifugu_rubripes
ENSCANG00000012540	GPATCH1	77	54.701	ENSTRUG00000005785	-	80	46.977	Takifugu_rubripes
ENSCANG00000012540	GPATCH1	75	54.098	ENSTNIG00000002554	gpatch1	80	54.324	Tetraodon_nigroviridis
ENSCANG00000012540	GPATCH1	57	82.203	ENSTBEG00000007750	-	70	69.737	Tupaia_belangeri
ENSCANG00000012540	GPATCH1	89	84.830	ENSTTRG00000012221	GPATCH1	88	85.222	Tursiops_truncatus
ENSCANG00000012540	GPATCH1	94	90.087	ENSUMAG00000014645	GPATCH1	89	90.087	Ursus_maritimus
ENSCANG00000012540	GPATCH1	76	90.972	ENSVPAG00000010313	GPATCH1	75	90.972	Vicugna_pacos
ENSCANG00000012540	GPATCH1	93	86.167	ENSVVUG00000016572	GPATCH1	85	85.802	Vulpes_vulpes
ENSCANG00000012540	GPATCH1	99	55.269	ENSXETG00000018276	gpatch1	81	64.072	Xenopus_tropicalis