EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000015680 (Gene tree)
Gene ID: 105506120
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 57484 bases
Position: chrKN979741.1:20060-77543
Accession: 105506120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000005371	EST1	PF10374.9	9.6e-25	1	1
ENSCANP00000005280	EST1	PF10374.9	9.9e-25	1	1
ENSCANP00000005386	EST1	PF10374.9	2.6e-22	1	1
ENSCANP00000005371	EST1_DNA_bind	PF10373.9	1.2e-55	1	1
ENSCANP00000005280	EST1_DNA_bind	PF10373.9	1.2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000020662	SMG7-203	555	-	ENSCANP00000005386	184 (aa)	-	A0A2K5HM17
ENSCANT00000020629	SMG7-202	3414	XM_011934150	ENSCANP00000005371	1137 (aa)	XP_011789540	A0A2K5HM04
ENSCANT00000020349	SMG7-201	5961	-	ENSCANP00000005280	1145 (aa)	-	A0A2K5HLS1
ENSCANT00000020703	SMG7-204	189	-	ENSCANP00000005393	63 (aa)	-	A0A2K5HM23

Gene Model

Click here to download ENSCANG00000015680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000015680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000015680	SMG7	100	99.389	ENSG00000116698	SMG7	100	99.389	Homo_sapiens
ENSCANG00000015680	SMG7	86	93.038	ENSAPOG00000009611	smg7	95	74.622	Acanthochromis_polyacanthus
ENSCANG00000015680	SMG7	100	96.943	ENSAMEG00000002357	SMG7	100	96.943	Ailuropoda_melanoleuca
ENSCANG00000015680	SMG7	70	94.574	ENSACIG00000015152	smg7	100	65.062	Amphilophus_citrinellus
ENSCANG00000015680	SMG7	85	92.994	ENSAOCG00000013538	smg7	99	66.810	Amphiprion_ocellaris
ENSCANG00000015680	SMG7	85	92.994	ENSAPEG00000007851	smg7	99	66.667	Amphiprion_percula
ENSCANG00000015680	SMG7	86	93.082	ENSATEG00000006931	smg7	99	66.269	Anabas_testudineus
ENSCANG00000015680	SMG7	99	89.585	ENSAPLG00000015811	SMG7	99	89.409	Anas_platyrhynchos
ENSCANG00000015680	SMG7	100	87.532	ENSACAG00000014989	SMG7	96	88.052	Anolis_carolinensis
ENSCANG00000015680	SMG7	100	98.690	ENSANAG00000028114	SMG7	100	98.370	Aotus_nancymaae
ENSCANG00000015680	SMG7	85	94.231	ENSACLG00000022079	smg7	99	66.294	Astatotilapia_calliptera
ENSCANG00000015680	SMG7	84	94.194	ENSAMXG00000020809	smg7	99	68.178	Astyanax_mexicanus
ENSCANG00000015680	SMG7	99	96.188	ENSBTAG00000008003	SMG7	99	96.188	Bos_taurus
ENSCANG00000015680	SMG7	100	98.428	ENSCJAG00000005135	SMG7	99	98.404	Callithrix_jacchus
ENSCANG00000015680	SMG7	100	93.450	ENSCAFG00000013276	SMG7	94	93.450	Canis_familiaris
ENSCANG00000015680	SMG7	100	97.205	ENSCAFG00020015475	SMG7	99	96.919	Canis_lupus_dingo
ENSCANG00000015680	SMG7	100	92.576	ENSCHIG00000018192	SMG7	96	92.576	Capra_hircus
ENSCANG00000015680	SMG7	100	97.293	ENSTSYG00000002667	SMG7	100	97.293	Carlito_syrichta
ENSCANG00000015680	SMG7	100	93.624	ENSCPOG00000008906	SMG7	97	93.624	Cavia_porcellus
ENSCANG00000015680	SMG7	100	98.952	ENSCCAG00000028596	SMG7	100	98.952	Cebus_capucinus
ENSCANG00000015680	SMG7	100	99.913	ENSCATG00000011063	SMG7	100	99.913	Cercocebus_atys
ENSCANG00000015680	SMG7	99	96.720	ENSCLAG00000010751	SMG7	99	96.720	Chinchilla_lanigera
ENSCANG00000015680	SMG7	100	95.721	ENSCSAG00000012654	SMG7	94	95.721	Chlorocebus_sabaeus
ENSCANG00000015680	SMG7	95	85.910	ENSCHOG00000010522	SMG7	93	86.276	Choloepus_hoffmanni
ENSCANG00000015680	SMG7	100	92.080	ENSCPBG00000015724	SMG7	99	91.784	Chrysemys_picta_bellii
ENSCANG00000015680	SMG7	85	51.829	ENSCING00000006953	-	95	53.571	Ciona_intestinalis
ENSCANG00000015680	SMG7	99	95.124	ENSCGRG00001013705	Smg7	99	95.124	Cricetulus_griseus_chok1gshd
ENSCANG00000015680	SMG7	99	95.120	ENSCGRG00000018401	Smg7	100	95.120	Cricetulus_griseus_crigri
ENSCANG00000015680	SMG7	84	90.260	ENSCSEG00000007392	-	89	88.608	Cynoglossus_semilaevis
ENSCANG00000015680	SMG7	80	88.000	ENSCVAG00000011842	smg7	98	69.000	Cyprinodon_variegatus
ENSCANG00000015680	SMG7	84	94.839	ENSDARG00000060767	smg7	99	67.736	Danio_rerio
ENSCANG00000015680	SMG7	100	92.664	ENSDORG00000007331	Smg7	96	92.664	Dipodomys_ordii
ENSCANG00000015680	SMG7	97	92.058	ENSETEG00000002654	SMG7	96	92.058	Echinops_telfairi
ENSCANG00000015680	SMG7	100	93.886	ENSEASG00005006524	SMG7	96	93.886	Equus_asinus_asinus
ENSCANG00000015680	SMG7	100	93.974	ENSECAG00000004313	SMG7	99	93.878	Equus_caballus
ENSCANG00000015680	SMG7	97	92.696	ENSEEUG00000002024	SMG7	91	92.696	Erinaceus_europaeus
ENSCANG00000015680	SMG7	85	94.268	ENSELUG00000010293	smg7	98	65.839	Esox_lucius
ENSCANG00000015680	SMG7	100	93.624	ENSFCAG00000010900	SMG7	99	93.315	Felis_catus
ENSCANG00000015680	SMG7	100	86.111	ENSFALG00000003047	SMG7	98	86.024	Ficedula_albicollis
ENSCANG00000015680	SMG7	100	93.362	ENSFDAG00000012121	SMG7	97	93.362	Fukomys_damarensis
ENSCANG00000015680	SMG7	85	89.809	ENSFHEG00000011073	smg7	99	63.932	Fundulus_heteroclitus
ENSCANG00000015680	SMG7	85	90.446	ENSGMOG00000004916	smg7	85	73.469	Gadus_morhua
ENSCANG00000015680	SMG7	99	89.427	ENSGALG00000004667	SMG7	99	89.251	Gallus_gallus
ENSCANG00000015680	SMG7	95	85.475	ENSGAFG00000019000	smg7	99	64.533	Gambusia_affinis
ENSCANG00000015680	SMG7	85	91.720	ENSGACG00000001634	smg7	99	63.139	Gasterosteus_aculeatus
ENSCANG00000015680	SMG7	99	86.813	ENSGAGG00000024208	-	85	95.597	Gopherus_agassizii
ENSCANG00000015680	SMG7	100	99.301	ENSGGOG00000002342	SMG7	100	99.301	Gorilla_gorilla
ENSCANG00000015680	SMG7	86	93.038	ENSHBUG00000003726	smg7	94	72.589	Haplochromis_burtoni
ENSCANG00000015680	SMG7	99	97.252	ENSHGLG00000009353	SMG7	99	97.252	Heterocephalus_glaber_female
ENSCANG00000015680	SMG7	100	83.057	ENSHGLG00100004878	-	96	85.502	Heterocephalus_glaber_male
ENSCANG00000015680	SMG7	99	97.340	ENSHGLG00100009637	-	99	97.340	Heterocephalus_glaber_male
ENSCANG00000015680	SMG7	96	79.096	ENSHCOG00000012804	-	89	84.337	Hippocampus_comes
ENSCANG00000015680	SMG7	84	94.194	ENSIPUG00000016997	smg7	99	68.564	Ictalurus_punctatus
ENSCANG00000015680	SMG7	100	94.236	ENSSTOG00000000401	SMG7	99	94.149	Ictidomys_tridecemlineatus
ENSCANG00000015680	SMG7	96	85.311	ENSJJAG00000000309	-	100	85.311	Jaculus_jaculus
ENSCANG00000015680	SMG7	100	91.616	ENSJJAG00000012351	Smg7	96	91.616	Jaculus_jaculus
ENSCANG00000015680	SMG7	72	93.182	ENSKMAG00000004900	smg7	96	70.500	Kryptolebias_marmoratus
ENSCANG00000015680	SMG7	52	63.000	ENSLBEG00000005220	-	75	63.000	Labrus_bergylta
ENSCANG00000015680	SMG7	86	91.772	ENSLBEG00000002983	smg7	99	66.466	Labrus_bergylta
ENSCANG00000015680	SMG7	90	90.964	ENSLACG00000000972	SMG7	99	75.523	Latimeria_chalumnae
ENSCANG00000015680	SMG7	86	94.340	ENSLOCG00000002010	smg7	99	67.056	Lepisosteus_oculatus
ENSCANG00000015680	SMG7	100	93.362	ENSLAFG00000008186	SMG7	96	93.362	Loxodonta_africana
ENSCANG00000015680	SMG7	100	99.825	ENSMFAG00000031653	SMG7	100	99.825	Macaca_fascicularis
ENSCANG00000015680	SMG7	100	99.913	ENSMMUG00000018458	SMG7	99	98.940	Macaca_mulatta
ENSCANG00000015680	SMG7	100	99.913	ENSMNEG00000034798	SMG7	100	99.913	Macaca_nemestrina
ENSCANG00000015680	SMG7	100	99.913	ENSMLEG00000037170	SMG7	100	99.913	Mandrillus_leucophaeus
ENSCANG00000015680	SMG7	85	92.357	ENSMAMG00000018733	smg7	84	65.437	Mastacembelus_armatus
ENSCANG00000015680	SMG7	85	94.231	ENSMZEG00005015247	smg7	99	65.866	Maylandia_zebra
ENSCANG00000015680	SMG7	97	89.218	ENSMGAG00000001561	SMG7	98	89.039	Meleagris_gallopavo
ENSCANG00000015680	SMG7	99	95.390	ENSMAUG00000019484	Smg7	99	95.390	Mesocricetus_auratus
ENSCANG00000015680	SMG7	99	98.316	ENSMICG00000007145	SMG7	99	98.316	Microcebus_murinus
ENSCANG00000015680	SMG7	99	95.390	ENSMOCG00000020748	Smg7	99	95.390	Microtus_ochrogaster
ENSCANG00000015680	SMG7	88	89.441	ENSMMOG00000001524	smg7	99	64.619	Mola_mola
ENSCANG00000015680	SMG7	92	93.858	ENSMODG00000007139	SMG7	99	93.858	Monodelphis_domestica
ENSCANG00000015680	SMG7	85	92.994	ENSMALG00000000061	smg7	93	66.179	Monopterus_albus
ENSCANG00000015680	SMG7	99	95.035	MGP_CAROLIEiJ_G0014704	Smg7	99	94.681	Mus_caroli
ENSCANG00000015680	SMG7	99	94.947	ENSMUSG00000042772	Smg7	99	94.947	Mus_musculus
ENSCANG00000015680	SMG7	99	95.124	MGP_PahariEiJ_G0027940	Smg7	99	95.124	Mus_pahari
ENSCANG00000015680	SMG7	99	95.035	MGP_SPRETEiJ_G0015511	Smg7	99	95.035	Mus_spretus
ENSCANG00000015680	SMG7	100	93.450	ENSMPUG00000011732	SMG7	95	93.450	Mustela_putorius_furo
ENSCANG00000015680	SMG7	100	92.838	ENSMLUG00000015417	SMG7	96	92.838	Myotis_lucifugus
ENSCANG00000015680	SMG7	99	96.365	ENSNGAG00000009836	Smg7	99	96.365	Nannospalax_galili
ENSCANG00000015680	SMG7	98	61.391	ENSNBRG00000024343	smg7	96	70.476	Neolamprologus_brichardi
ENSCANG00000015680	SMG7	100	99.563	ENSNLEG00000018018	SMG7	100	99.563	Nomascus_leucogenys
ENSCANG00000015680	SMG7	71	92.276	ENSMEUG00000004681	SMG7	73	92.276	Notamacropus_eugenii
ENSCANG00000015680	SMG7	85	96.178	ENSOPRG00000013942	SMG7	96	78.089	Ochotona_princeps
ENSCANG00000015680	SMG7	99	97.252	ENSODEG00000010390	SMG7	99	97.252	Octodon_degus
ENSCANG00000015680	SMG7	84	94.194	ENSONIG00000000277	smg7	99	65.981	Oreochromis_niloticus
ENSCANG00000015680	SMG7	100	87.304	ENSOANG00000000994	SMG7	98	87.565	Ornithorhynchus_anatinus
ENSCANG00000015680	SMG7	100	86.201	ENSOCUG00000005887	SMG7	90	86.376	Oryctolagus_cuniculus
ENSCANG00000015680	SMG7	98	83.333	ENSORLG00000007314	smg7	77	85.965	Oryzias_latipes
ENSCANG00000015680	SMG7	87	90.000	ENSORLG00020015779	smg7	78	85.057	Oryzias_latipes_hni
ENSCANG00000015680	SMG7	90	87.879	ENSORLG00015012289	smg7	99	63.589	Oryzias_latipes_hsok
ENSCANG00000015680	SMG7	85	91.083	ENSOMEG00000002328	smg7	99	62.119	Oryzias_melastigma
ENSCANG00000015680	SMG7	97	92.599	ENSOGAG00000003107	SMG7	90	92.509	Otolemur_garnettii
ENSCANG00000015680	SMG7	100	92.314	ENSOARG00000001352	SMG7	100	92.225	Ovis_aries
ENSCANG00000015680	SMG7	100	99.563	ENSPPAG00000031619	SMG7	100	99.563	Pan_paniscus
ENSCANG00000015680	SMG7	99	97.872	ENSPPRG00000011222	SMG7	99	97.872	Panthera_pardus
ENSCANG00000015680	SMG7	100	97.817	ENSPTIG00000007242	SMG7	100	97.817	Panthera_tigris_altaica
ENSCANG00000015680	SMG7	100	99.563	ENSPTRG00000001764	SMG7	100	99.563	Pan_troglodytes
ENSCANG00000015680	SMG7	99	99.911	ENSPANG00000004520	SMG7	99	99.911	Papio_anubis
ENSCANG00000015680	SMG7	89	89.634	ENSPKIG00000007242	smg7	99	65.965	Paramormyrops_kingsleyae
ENSCANG00000015680	SMG7	98	90.714	ENSPSIG00000012201	SMG7	100	90.446	Pelodiscus_sinensis
ENSCANG00000015680	SMG7	59	57.653	ENSPMGG00000021833	smg7	89	57.000	Periophthalmus_magnuspinnatus
ENSCANG00000015680	SMG7	90	82.530	ENSPMGG00000002179	-	90	84.049	Periophthalmus_magnuspinnatus
ENSCANG00000015680	SMG7	100	91.354	ENSPEMG00000011315	Smg7	100	92.035	Peromyscus_maniculatus_bairdii
ENSCANG00000015680	SMG7	100	93.630	ENSPCIG00000003786	SMG7	99	93.357	Phascolarctos_cinereus
ENSCANG00000015680	SMG7	85	90.446	ENSPFOG00000019219	smg7	99	61.889	Poecilia_formosa
ENSCANG00000015680	SMG7	85	90.446	ENSPLAG00000001446	smg7	99	64.650	Poecilia_latipinna
ENSCANG00000015680	SMG7	85	90.446	ENSPMEG00000005218	smg7	99	63.929	Poecilia_mexicana
ENSCANG00000015680	SMG7	85	89.809	ENSPREG00000019039	smg7	91	61.806	Poecilia_reticulata
ENSCANG00000015680	SMG7	99	99.645	ENSPPYG00000000427	SMG7	99	99.645	Pongo_abelii
ENSCANG00000015680	SMG7	97	81.876	ENSPCAG00000008360	SMG7	92	81.876	Procavia_capensis
ENSCANG00000015680	SMG7	98	98.333	ENSPCOG00000011996	SMG7	99	94.238	Propithecus_coquereli
ENSCANG00000015680	SMG7	85	98.077	ENSPVAG00000000851	SMG7	86	87.464	Pteropus_vampyrus
ENSCANG00000015680	SMG7	85	94.231	ENSPNYG00000007643	smg7	99	66.064	Pundamilia_nyererei
ENSCANG00000015680	SMG7	88	91.975	ENSPNAG00000011374	smg7	99	68.288	Pygocentrus_nattereri
ENSCANG00000015680	SMG7	100	95.026	ENSRNOG00000027962	Smg7	100	95.026	Rattus_norvegicus
ENSCANG00000015680	SMG7	100	99.913	ENSRBIG00000036316	SMG7	100	99.913	Rhinopithecus_bieti
ENSCANG00000015680	SMG7	100	99.913	ENSRROG00000035719	SMG7	100	99.913	Rhinopithecus_roxellana
ENSCANG00000015680	SMG7	100	98.865	ENSSBOG00000023454	SMG7	100	98.865	Saimiri_boliviensis_boliviensis
ENSCANG00000015680	SMG7	99	93.617	ENSSHAG00000013147	SMG7	99	93.268	Sarcophilus_harrisii
ENSCANG00000015680	SMG7	84	92.903	ENSSFOG00015017252	smg7	96	76.842	Scleropages_formosus
ENSCANG00000015680	SMG7	85	92.994	ENSSMAG00000006067	smg7	99	65.946	Scophthalmus_maximus
ENSCANG00000015680	SMG7	86	93.038	ENSSDUG00000017543	smg7	99	65.818	Seriola_dumerili
ENSCANG00000015680	SMG7	86	93.038	ENSSLDG00000003750	-	95	93.038	Seriola_lalandi_dorsalis
ENSCANG00000015680	SMG7	100	89.746	ENSSPUG00000002064	SMG7	99	90.194	Sphenodon_punctatus
ENSCANG00000015680	SMG7	78	93.007	ENSSPAG00000008733	smg7	98	66.696	Stegastes_partitus
ENSCANG00000015680	SMG7	100	93.624	ENSSSCG00000015558	SMG7	99	93.617	Sus_scrofa
ENSCANG00000015680	SMG7	99	89.251	ENSTGUG00000003928	SMG7	100	89.163	Taeniopygia_guttata
ENSCANG00000015680	SMG7	95	82.857	ENSTRUG00000003612	-	93	83.721	Takifugu_rubripes
ENSCANG00000015680	SMG7	84	89.103	ENSTNIG00000002802	smg7	99	59.002	Tetraodon_nigroviridis
ENSCANG00000015680	SMG7	78	96.610	ENSTBEG00000003220	SMG7	72	96.610	Tupaia_belangeri
ENSCANG00000015680	SMG7	97	93.231	ENSTTRG00000014778	SMG7	91	93.231	Tursiops_truncatus
ENSCANG00000015680	SMG7	96	93.425	ENSUAMG00000017473	SMG7	100	93.425	Ursus_americanus
ENSCANG00000015680	SMG7	100	93.537	ENSUMAG00000016389	SMG7	100	93.537	Ursus_maritimus
ENSCANG00000015680	SMG7	100	93.537	ENSVVUG00000008976	SMG7	99	93.528	Vulpes_vulpes
ENSCANG00000015680	SMG7	84	92.258	ENSXETG00000012528	smg7	99	71.179	Xenopus_tropicalis
ENSCANG00000015680	SMG7	85	91.083	ENSXMAG00000007123	smg7	99	64.599	Xiphophorus_maculatus