EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000015764 (Gene tree)
Gene ID: 105504625
Gene Symbol: CTCF
Alias: -
Full Name: CCCTC-binding factor
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Minus strand
Length: 35969 bases
Position: chrKN985912.1:2345652-2381620
Accession: 105504625
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000004609	zf-C2H2	PF00096.26	3.2e-32	1	6
ENSCANP00000004609	zf-C2H2	PF00096.26	3.2e-32	2	6
ENSCANP00000004609	zf-C2H2	PF00096.26	3.2e-32	3	6
ENSCANP00000004609	zf-C2H2	PF00096.26	3.2e-32	4	6
ENSCANP00000004609	zf-C2H2	PF00096.26	3.2e-32	5	6
ENSCANP00000004609	zf-C2H2	PF00096.26	3.2e-32	6	6
ENSCANP00000004613	zf-C2H2	PF00096.26	3.4e-17	1	3
ENSCANP00000004613	zf-C2H2	PF00096.26	3.4e-17	2	3
ENSCANP00000004613	zf-C2H2	PF00096.26	3.4e-17	3	3
ENSCANP00000004609	zf-met	PF12874.7	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000017895	CTCF-202	972	-	ENSCANP00000004613	323 (aa)	-	A0A2K5HJT7
ENSCANT00000017891	CTCF-201	2022	XM_011932132	ENSCANP00000004609	673 (aa)	XP_011787522	A0A2K5HJV0

Gene Model

Click here to download ENSCANG00000015764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000015764's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000015764	CTCF	54	43.605	ENSCANG00000036807	PRDM5	85	36.154
ENSCANG00000015764	CTCF	54	41.573	ENSCANG00000040047	ZNF768	53	48.101
ENSCANG00000015764	CTCF	52	42.202	ENSCANG00000036397	ZFP64	71	41.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000015764	CTCF	100	95.796	ENSMEUG00000005728	CTCF	93	95.796	Notamacropus_eugenii