EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCANG00000016307 (Gene tree)
Gene ID: 105507409
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 230531 bases
Position: chrKN979940.1:3550384-3780914
Accession: 105507409
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000004845	S1	PF00575.23	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000018724	SRBD1-201	3601	XM_011935886	ENSCANP00000004845	993 (aa)	XP_011791276	A0A2K5HKI9

Gene Model

Click here to download ENSCANG00000016307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000016307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000016307	SRBD1	99	96.073	ENSG00000068784	SRBD1	99	96.073	Homo_sapiens
ENSCANG00000016307	SRBD1	100	51.838	ENSAPOG00000005103	si:ch211-117n7.8	94	53.571	Acanthochromis_polyacanthus
ENSCANG00000016307	SRBD1	99	91.239	ENSAMEG00000005993	SRBD1	99	91.239	Ailuropoda_melanoleuca
ENSCANG00000016307	SRBD1	83	57.551	ENSACIG00000009875	si:ch211-117n7.8	99	51.844	Amphilophus_citrinellus
ENSCANG00000016307	SRBD1	98	51.988	ENSAOCG00000024718	si:ch211-117n7.8	94	53.237	Amphiprion_ocellaris
ENSCANG00000016307	SRBD1	83	58.076	ENSAPEG00000002645	si:ch211-117n7.8	86	58.076	Amphiprion_percula
ENSCANG00000016307	SRBD1	89	54.995	ENSATEG00000010844	si:ch211-117n7.8	97	52.284	Anabas_testudineus
ENSCANG00000016307	SRBD1	99	70.529	ENSAPLG00000006313	SRBD1	99	70.629	Anas_platyrhynchos
ENSCANG00000016307	SRBD1	99	94.859	ENSANAG00000025573	SRBD1	99	94.859	Aotus_nancymaae
ENSCANG00000016307	SRBD1	95	52.752	ENSACLG00000024219	si:ch211-117n7.8	94	52.464	Astatotilapia_calliptera
ENSCANG00000016307	SRBD1	87	59.336	ENSAMXG00000004294	SRBD1	93	56.508	Astyanax_mexicanus
ENSCANG00000016307	SRBD1	99	88.632	ENSBTAG00000007508	SRBD1	96	89.336	Bos_taurus
ENSCANG00000016307	SRBD1	99	93.750	ENSCJAG00000000727	SRBD1	99	93.750	Callithrix_jacchus
ENSCANG00000016307	SRBD1	99	90.754	ENSCAFG00000002554	SRBD1	99	90.754	Canis_familiaris
ENSCANG00000016307	SRBD1	99	87.827	ENSCAFG00020026284	SRBD1	99	90.476	Canis_lupus_dingo
ENSCANG00000016307	SRBD1	99	88.632	ENSCHIG00000016535	SRBD1	98	89.336	Capra_hircus
ENSCANG00000016307	SRBD1	99	90.863	ENSTSYG00000012797	SRBD1	99	90.863	Carlito_syrichta
ENSCANG00000016307	SRBD1	99	87.626	ENSCPOG00000004773	SRBD1	99	87.626	Cavia_porcellus
ENSCANG00000016307	SRBD1	99	94.556	ENSCCAG00000025589	SRBD1	99	94.556	Cebus_capucinus
ENSCANG00000016307	SRBD1	99	98.589	ENSCATG00000039530	SRBD1	99	98.589	Cercocebus_atys
ENSCANG00000016307	SRBD1	99	88.554	ENSCLAG00000008623	SRBD1	99	88.554	Chinchilla_lanigera
ENSCANG00000016307	SRBD1	99	98.790	ENSCSAG00000013350	SRBD1	99	98.790	Chlorocebus_sabaeus
ENSCANG00000016307	SRBD1	93	77.795	ENSCHOG00000003805	SRBD1	93	77.795	Choloepus_hoffmanni
ENSCANG00000016307	SRBD1	99	73.100	ENSCPBG00000005677	SRBD1	99	72.873	Chrysemys_picta_bellii
ENSCANG00000016307	SRBD1	79	42.405	ENSCING00000005950	-	99	42.405	Ciona_intestinalis
ENSCANG00000016307	SRBD1	79	42.695	ENSCSAVG00000000861	-	99	42.695	Ciona_savignyi
ENSCANG00000016307	SRBD1	99	84.538	ENSCGRG00001000513	Srbd1	99	84.538	Cricetulus_griseus_chok1gshd
ENSCANG00000016307	SRBD1	99	84.538	ENSCGRG00000002283	Srbd1	99	84.538	Cricetulus_griseus_crigri
ENSCANG00000016307	SRBD1	88	54.922	ENSCSEG00000000856	si:ch211-117n7.8	88	55.034	Cynoglossus_semilaevis
ENSCANG00000016307	SRBD1	84	56.486	ENSCVAG00000020212	si:ch211-117n7.8	89	56.486	Cyprinodon_variegatus
ENSCANG00000016307	SRBD1	99	89.870	ENSDNOG00000018686	SRBD1	99	89.870	Dasypus_novemcinctus
ENSCANG00000016307	SRBD1	99	86.606	ENSDORG00000010468	Srbd1	99	86.606	Dipodomys_ordii
ENSCANG00000016307	SRBD1	94	34.441	FBgn0051156	CG31156	98	34.642	Drosophila_melanogaster
ENSCANG00000016307	SRBD1	90	82.679	ENSETEG00000000739	SRBD1	91	82.679	Echinops_telfairi
ENSCANG00000016307	SRBD1	73	48.980	ENSEBUG00000008902	si:ch211-117n7.8	96	48.980	Eptatretus_burgeri
ENSCANG00000016307	SRBD1	99	88.531	ENSEASG00005003132	SRBD1	97	94.904	Equus_asinus_asinus
ENSCANG00000016307	SRBD1	99	91.751	ENSECAG00000013865	SRBD1	98	91.751	Equus_caballus
ENSCANG00000016307	SRBD1	97	54.675	ENSELUG00000012592	si:ch211-117n7.8	92	54.675	Esox_lucius
ENSCANG00000016307	SRBD1	99	91.549	ENSFCAG00000005101	SRBD1	99	91.549	Felis_catus
ENSCANG00000016307	SRBD1	92	71.739	ENSFALG00000012966	SRBD1	97	69.493	Ficedula_albicollis
ENSCANG00000016307	SRBD1	99	85.772	ENSFDAG00000016670	SRBD1	98	86.722	Fukomys_damarensis
ENSCANG00000016307	SRBD1	96	52.680	ENSFHEG00000019480	si:ch211-117n7.8	93	52.680	Fundulus_heteroclitus
ENSCANG00000016307	SRBD1	50	52.703	ENSGMOG00000018010	-	100	52.703	Gadus_morhua
ENSCANG00000016307	SRBD1	99	69.414	ENSGALG00000009990	SRBD1	99	69.246	Gallus_gallus
ENSCANG00000016307	SRBD1	98	50.800	ENSGAFG00000019664	si:ch211-117n7.8	97	51.111	Gambusia_affinis
ENSCANG00000016307	SRBD1	62	60.480	ENSGACG00000010794	si:ch211-117n7.8	100	60.640	Gasterosteus_aculeatus
ENSCANG00000016307	SRBD1	84	80.866	ENSGAGG00000006166	SRBD1	99	80.866	Gopherus_agassizii
ENSCANG00000016307	SRBD1	97	96.491	ENSGGOG00000005910	SRBD1	100	96.488	Gorilla_gorilla
ENSCANG00000016307	SRBD1	89	48.086	ENSHBUG00000013207	si:ch211-117n7.8	99	45.799	Haplochromis_burtoni
ENSCANG00000016307	SRBD1	100	88.229	ENSHGLG00000018153	-	100	88.229	Heterocephalus_glaber_female
ENSCANG00000016307	SRBD1	100	88.028	ENSHGLG00100015183	-	100	88.028	Heterocephalus_glaber_male
ENSCANG00000016307	SRBD1	85	60.915	ENSIPUG00000009661	srbd1	95	56.256	Ictalurus_punctatus
ENSCANG00000016307	SRBD1	99	90.634	ENSSTOG00000005898	SRBD1	99	90.634	Ictidomys_tridecemlineatus
ENSCANG00000016307	SRBD1	99	80.704	ENSJJAG00000022244	Srbd1	99	80.704	Jaculus_jaculus
ENSCANG00000016307	SRBD1	100	50.932	ENSKMAG00000003473	si:ch211-117n7.8	97	51.777	Kryptolebias_marmoratus
ENSCANG00000016307	SRBD1	98	51.129	ENSLBEG00000027518	si:ch211-117n7.8	97	51.140	Labrus_bergylta
ENSCANG00000016307	SRBD1	85	70.804	ENSLACG00000009790	SRBD1	100	70.804	Latimeria_chalumnae
ENSCANG00000016307	SRBD1	99	58.119	ENSLOCG00000016360	si:ch211-117n7.8	99	58.119	Lepisosteus_oculatus
ENSCANG00000016307	SRBD1	99	98.992	ENSMFAG00000042026	SRBD1	99	98.992	Macaca_fascicularis
ENSCANG00000016307	SRBD1	99	98.690	ENSMMUG00000003490	SRBD1	99	98.690	Macaca_mulatta
ENSCANG00000016307	SRBD1	99	96.270	ENSMNEG00000034701	SRBD1	99	96.270	Macaca_nemestrina
ENSCANG00000016307	SRBD1	99	98.589	ENSMLEG00000000745	SRBD1	99	98.589	Mandrillus_leucophaeus
ENSCANG00000016307	SRBD1	82	56.490	ENSMAMG00000021921	si:ch211-117n7.8	87	55.000	Mastacembelus_armatus
ENSCANG00000016307	SRBD1	95	52.752	ENSMZEG00005027369	si:ch211-117n7.8	94	52.464	Maylandia_zebra
ENSCANG00000016307	SRBD1	80	75.063	ENSMGAG00000010273	SRBD1	100	75.063	Meleagris_gallopavo
ENSCANG00000016307	SRBD1	79	86.347	ENSMAUG00000013916	Srbd1	99	83.886	Mesocricetus_auratus
ENSCANG00000016307	SRBD1	99	92.455	ENSMICG00000007835	SRBD1	99	92.455	Microcebus_murinus
ENSCANG00000016307	SRBD1	99	84.004	ENSMOCG00000018716	Srbd1	99	84.004	Microtus_ochrogaster
ENSCANG00000016307	SRBD1	84	56.404	ENSMMOG00000007507	si:ch211-117n7.8	87	56.404	Mola_mola
ENSCANG00000016307	SRBD1	99	50.818	ENSMALG00000001562	si:ch211-117n7.8	93	52.567	Monopterus_albus
ENSCANG00000016307	SRBD1	99	81.974	MGP_CAROLIEiJ_G0021934	Srbd1	99	83.706	Mus_caroli
ENSCANG00000016307	SRBD1	99	82.075	ENSMUSG00000024135	Srbd1	99	82.653	Mus_musculus
ENSCANG00000016307	SRBD1	99	81.168	MGP_PahariEiJ_G0020924	Srbd1	99	81.168	Mus_pahari
ENSCANG00000016307	SRBD1	99	82.175	MGP_SPRETEiJ_G0022850	Srbd1	99	82.175	Mus_spretus
ENSCANG00000016307	SRBD1	99	87.210	ENSMLUG00000007039	SRBD1	99	87.210	Myotis_lucifugus
ENSCANG00000016307	SRBD1	99	83.529	ENSNGAG00000011893	Srbd1	99	83.235	Nannospalax_galili
ENSCANG00000016307	SRBD1	89	53.356	ENSNBRG00000012873	si:ch211-117n7.8	99	50.101	Neolamprologus_brichardi
ENSCANG00000016307	SRBD1	99	96.979	ENSNLEG00000016877	SRBD1	99	96.979	Nomascus_leucogenys
ENSCANG00000016307	SRBD1	99	84.894	ENSODEG00000012095	SRBD1	99	84.894	Octodon_degus
ENSCANG00000016307	SRBD1	96	52.469	ENSONIG00000000945	si:ch211-117n7.8	99	57.692	Oreochromis_niloticus
ENSCANG00000016307	SRBD1	99	91.147	ENSOCUG00000015385	SRBD1	99	91.147	Oryctolagus_cuniculus
ENSCANG00000016307	SRBD1	85	53.617	ENSORLG00000004427	si:ch211-117n7.8	84	53.617	Oryzias_latipes
ENSCANG00000016307	SRBD1	99	50.867	ENSORLG00020012792	si:ch211-117n7.8	97	51.940	Oryzias_latipes_hni
ENSCANG00000016307	SRBD1	99	51.212	ENSORLG00015018598	si:ch211-117n7.8	97	52.104	Oryzias_latipes_hsok
ENSCANG00000016307	SRBD1	83	55.900	ENSOMEG00000012229	si:ch211-117n7.8	97	49.801	Oryzias_melastigma
ENSCANG00000016307	SRBD1	99	84.708	ENSOGAG00000001076	SRBD1	99	84.708	Otolemur_garnettii
ENSCANG00000016307	SRBD1	99	84.159	ENSOARG00000005958	SRBD1	99	84.840	Ovis_aries
ENSCANG00000016307	SRBD1	99	96.475	ENSPPAG00000038442	SRBD1	99	96.475	Pan_paniscus
ENSCANG00000016307	SRBD1	99	91.541	ENSPPRG00000003449	SRBD1	99	91.541	Panthera_pardus
ENSCANG00000016307	SRBD1	99	91.641	ENSPTIG00000012495	SRBD1	99	91.641	Panthera_tigris_altaica
ENSCANG00000016307	SRBD1	99	96.475	ENSPTRG00000011889	SRBD1	99	96.475	Pan_troglodytes
ENSCANG00000016307	SRBD1	99	98.589	ENSPANG00000008063	SRBD1	99	98.589	Papio_anubis
ENSCANG00000016307	SRBD1	96	54.489	ENSPKIG00000021973	si:ch211-117n7.8	97	54.309	Paramormyrops_kingsleyae
ENSCANG00000016307	SRBD1	99	72.144	ENSPSIG00000008992	SRBD1	99	72.810	Pelodiscus_sinensis
ENSCANG00000016307	SRBD1	87	53.400	ENSPMGG00000013348	si:ch211-117n7.8	98	51.321	Periophthalmus_magnuspinnatus
ENSCANG00000016307	SRBD1	99	82.694	ENSPEMG00000020684	Srbd1	99	82.694	Peromyscus_maniculatus_bairdii
ENSCANG00000016307	SRBD1	98	51.241	ENSPFOG00000010650	si:ch211-117n7.8	97	51.665	Poecilia_formosa
ENSCANG00000016307	SRBD1	98	51.389	ENSPLAG00000002141	si:ch211-117n7.8	85	56.351	Poecilia_latipinna
ENSCANG00000016307	SRBD1	98	51.341	ENSPMEG00000018537	si:ch211-117n7.8	97	51.766	Poecilia_mexicana
ENSCANG00000016307	SRBD1	85	56.171	ENSPREG00000003258	si:ch211-117n7.8	87	56.171	Poecilia_reticulata
ENSCANG00000016307	SRBD1	99	88.984	ENSPPYG00000012444	SRBD1	99	88.984	Pongo_abelii
ENSCANG00000016307	SRBD1	82	81.963	ENSPCAG00000005629	SRBD1	86	81.963	Procavia_capensis
ENSCANG00000016307	SRBD1	99	80.441	ENSPCOG00000017669	SRBD1	99	80.441	Propithecus_coquereli
ENSCANG00000016307	SRBD1	99	81.067	ENSPVAG00000001782	SRBD1	99	81.067	Pteropus_vampyrus
ENSCANG00000016307	SRBD1	89	51.794	ENSPNYG00000000508	si:ch211-117n7.8	91	51.960	Pundamilia_nyererei
ENSCANG00000016307	SRBD1	97	56.982	ENSPNAG00000013492	SRBD1	95	56.982	Pygocentrus_nattereri
ENSCANG00000016307	SRBD1	99	80.684	ENSRNOG00000014720	Srbd1	99	81.288	Rattus_norvegicus
ENSCANG00000016307	SRBD1	100	98.892	ENSRBIG00000033486	SRBD1	100	98.892	Rhinopithecus_bieti
ENSCANG00000016307	SRBD1	100	98.892	ENSRROG00000041599	SRBD1	100	98.892	Rhinopithecus_roxellana
ENSCANG00000016307	SRBD1	99	94.355	ENSSBOG00000024982	SRBD1	99	94.355	Saimiri_boliviensis_boliviensis
ENSCANG00000016307	SRBD1	87	58.087	ENSSFOG00015001128	si:ch211-117n7.8	93	58.087	Scleropages_formosus
ENSCANG00000016307	SRBD1	98	51.575	ENSSMAG00000018256	si:ch211-117n7.8	83	57.043	Scophthalmus_maximus
ENSCANG00000016307	SRBD1	96	52.444	ENSSLDG00000023189	si:ch211-117n7.8	95	52.444	Seriola_lalandi_dorsalis
ENSCANG00000016307	SRBD1	99	78.449	ENSSARG00000009740	SRBD1	99	78.449	Sorex_araneus
ENSCANG00000016307	SRBD1	89	74.049	ENSSPUG00000010475	SRBD1	98	74.747	Sphenodon_punctatus
ENSCANG00000016307	SRBD1	84	54.642	ENSSPAG00000008092	-	95	50.870	Stegastes_partitus
ENSCANG00000016307	SRBD1	99	89.738	ENSSSCG00000008445	SRBD1	98	90.342	Sus_scrofa
ENSCANG00000016307	SRBD1	84	77.108	ENSTGUG00000003878	SRBD1	100	77.108	Taeniopygia_guttata
ENSCANG00000016307	SRBD1	99	50.000	ENSTRUG00000007080	si:ch211-117n7.8	96	55.456	Takifugu_rubripes
ENSCANG00000016307	SRBD1	99	50.049	ENSTNIG00000007464	si:ch211-117n7.8	97	50.501	Tetraodon_nigroviridis
ENSCANG00000016307	SRBD1	82	98.936	ENSTBEG00000004556	SRBD1	82	98.936	Tupaia_belangeri
ENSCANG00000016307	SRBD1	94	91.244	ENSTTRG00000011871	SRBD1	94	91.244	Tursiops_truncatus
ENSCANG00000016307	SRBD1	99	91.046	ENSUAMG00000008126	SRBD1	97	94.565	Ursus_americanus
ENSCANG00000016307	SRBD1	99	91.046	ENSUMAG00000012902	SRBD1	98	91.046	Ursus_maritimus
ENSCANG00000016307	SRBD1	91	91.841	ENSVPAG00000006825	SRBD1	100	91.841	Vicugna_pacos
ENSCANG00000016307	SRBD1	99	90.241	ENSVVUG00000005389	SRBD1	99	90.845	Vulpes_vulpes
ENSCANG00000016307	SRBD1	99	52.987	ENSXETG00000002760	srbd1	99	53.173	Xenopus_tropicalis
ENSCANG00000016307	SRBD1	98	50.895	ENSXMAG00000016861	si:ch211-117n7.8	97	51.313	Xiphophorus_maculatus