EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000017939 (Gene tree)
Gene ID: 105508210
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 102546 bases
Position: chrKN980051.1:2673082-2775627
Accession: 105508209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000005282	ResIII	PF04851.15	9.3e-12	1	1
ENSCANP00000005242	ResIII	PF04851.15	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000020289	-	1335	XM_011937024	ENSCANP00000005267	299 (aa)	XP_011792414	A0A2K5HLN5
ENSCANT00000020100	-	1148	XM_011937023	ENSCANP00000005197	117 (aa)	XP_011792413	A0A2K5HLG5
ENSCANT00000020230	-	3066	XM_011937021	ENSCANP00000005242	908 (aa)	XP_011792411	A0A2K5HLK9
ENSCANT00000020351	-	3083	XM_011937022	ENSCANP00000005282	724 (aa)	XP_011792412	A0A2K5HLP9

Gene Model

Click here to download ENSCANG00000017939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000017939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000017939	-	74	31.780	ENSCANG00000039934	ERCC6L2	82	31.780
ENSCANG00000017939	-	75	30.810	ENSCANG00000020239	CHD1L	56	30.810
ENSCANG00000017939	-	65	34.021	ENSCANG00000031935	ATRX	50	34.254
ENSCANG00000017939	-	68	32.827	ENSCANG00000003556	SMARCAD1	84	32.827
ENSCANG00000017939	-	59	39.216	ENSCANG00000037736	HELLS	60	39.216
ENSCANG00000017939	-	89	43.891	ENSCANG00000034891	RAD54L	84	43.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000017939	-	100	98.347	ENSG00000265817	FSBP	100	98.347	Homo_sapiens
ENSCANG00000017939	-	100	98.347	ENSG00000197275	RAD54B	100	97.582	Homo_sapiens
ENSCANG00000017939	-	99	90.207	ENSAMEG00000005834	-	99	87.143	Ailuropoda_melanoleuca
ENSCANG00000017939	-	99	58.436	ENSACIG00000013005	rad54b	99	54.645	Amphilophus_citrinellus
ENSCANG00000017939	-	99	59.209	ENSAOCG00000008523	rad54b	99	54.759	Amphiprion_ocellaris
ENSCANG00000017939	-	99	58.207	ENSAPEG00000001673	rad54b	99	55.055	Amphiprion_percula
ENSCANG00000017939	-	99	58.413	ENSATEG00000001527	rad54b	99	54.645	Anabas_testudineus
ENSCANG00000017939	-	99	75.519	ENSAPLG00000014366	-	99	69.651	Anas_platyrhynchos
ENSCANG00000017939	-	100	70.839	ENSACAG00000003671	-	99	71.357	Anolis_carolinensis
ENSCANG00000017939	-	89	94.136	ENSANAG00000019528	-	100	94.136	Aotus_nancymaae
ENSCANG00000017939	-	99	58.848	ENSACLG00000007826	rad54b	92	59.418	Astatotilapia_calliptera
ENSCANG00000017939	-	99	57.064	ENSAMXG00000039985	rad54b	97	56.527	Astyanax_mexicanus
ENSCANG00000017939	-	99	88.674	ENSBTAG00000000632	RAD54B	99	85.793	Bos_taurus
ENSCANG00000017939	-	76	40.145	WBGene00013792	Y116A8C.13	98	33.411	Caenorhabditis_elegans
ENSCANG00000017939	-	100	95.862	ENSCJAG00000000080	-	100	95.862	Callithrix_jacchus
ENSCANG00000017939	-	99	88.966	ENSCAFG00000009179	RAD54B	99	85.495	Canis_familiaris
ENSCANG00000017939	-	99	88.828	ENSCAFG00020012084	-	99	85.385	Canis_lupus_dingo
ENSCANG00000017939	-	99	88.398	ENSCHIG00000008230	-	99	85.352	Capra_hircus
ENSCANG00000017939	-	99	90.759	ENSTSYG00000013234	-	99	89.659	Carlito_syrichta
ENSCANG00000017939	-	99	87.983	ENSCPOG00000011643	-	99	83.921	Cavia_porcellus
ENSCANG00000017939	-	100	95.586	ENSCCAG00000011754	-	100	95.586	Cebus_capucinus
ENSCANG00000017939	-	100	99.309	ENSCATG00000030661	-	100	99.309	Cercocebus_atys
ENSCANG00000017939	-	100	87.879	ENSCLAG00000010476	-	100	84.303	Chinchilla_lanigera
ENSCANG00000017939	-	100	99.033	ENSCSAG00000012712	-	100	98.789	Chlorocebus_sabaeus
ENSCANG00000017939	-	100	75.687	ENSCPBG00000003204	-	99	70.511	Chrysemys_picta_bellii
ENSCANG00000017939	-	99	84.509	ENSCGRG00001020184	Rad54b	99	79.956	Cricetulus_griseus_chok1gshd
ENSCANG00000017939	-	99	83.126	ENSCGRG00000016752	Rad54b	99	78.744	Cricetulus_griseus_crigri
ENSCANG00000017939	-	99	57.692	ENSCSEG00000001601	rad54b	99	61.538	Cynoglossus_semilaevis
ENSCANG00000017939	-	99	60.274	ENSCVAG00000009200	rad54b	99	55.943	Cyprinodon_variegatus
ENSCANG00000017939	-	99	57.787	ENSDARG00000092134	rad54b	99	60.401	Danio_rerio
ENSCANG00000017939	-	99	88.276	ENSDNOG00000015535	-	99	84.759	Dasypus_novemcinctus
ENSCANG00000017939	-	99	88.260	ENSDORG00000002492	Rad54b	99	84.176	Dipodomys_ordii
ENSCANG00000017939	-	83	87.086	ENSETEG00000010605	-	100	81.622	Echinops_telfairi
ENSCANG00000017939	-	100	48.856	ENSEBUG00000009104	rad54b	99	46.360	Eptatretus_burgeri
ENSCANG00000017939	-	99	88.138	ENSEASG00005004021	-	99	86.523	Equus_asinus_asinus
ENSCANG00000017939	-	99	88.552	ENSECAG00000021949	-	99	87.143	Equus_caballus
ENSCANG00000017939	-	88	81.761	ENSEEUG00000008056	-	83	81.761	Erinaceus_europaeus
ENSCANG00000017939	-	99	59.178	ENSELUG00000009287	rad54b	99	53.774	Esox_lucius
ENSCANG00000017939	-	99	90.193	ENSFCAG00000015513	-	99	90.193	Felis_catus
ENSCANG00000017939	-	99	74.965	ENSFALG00000005467	-	99	68.913	Ficedula_albicollis
ENSCANG00000017939	-	98	88.136	ENSFDAG00000020541	-	100	85.039	Fukomys_damarensis
ENSCANG00000017939	-	99	57.629	ENSFHEG00000014382	rad54b	87	58.417	Fundulus_heteroclitus
ENSCANG00000017939	-	99	55.631	ENSGMOG00000014774	rad54b	98	56.281	Gadus_morhua
ENSCANG00000017939	-	100	73.901	ENSGALG00000043597	RAD54B	99	68.472	Gallus_gallus
ENSCANG00000017939	-	99	58.936	ENSGAFG00000007901	rad54b	99	54.595	Gambusia_affinis
ENSCANG00000017939	-	99	58.887	ENSGACG00000009128	rad54b	99	55.124	Gasterosteus_aculeatus
ENSCANG00000017939	-	100	75.137	ENSGAGG00000018747	-	99	70.076	Gopherus_agassizii
ENSCANG00000017939	-	99	98.069	ENSGGOG00000023516	-	99	97.140	Gorilla_gorilla
ENSCANG00000017939	-	99	58.413	ENSHBUG00000016017	rad54b	99	53.533	Haplochromis_burtoni
ENSCANG00000017939	-	99	86.575	ENSHGLG00000008263	RAD54B	99	83.607	Heterocephalus_glaber_female
ENSCANG00000017939	-	99	85.462	ENSHGLG00100008108	-	99	82.845	Heterocephalus_glaber_male
ENSCANG00000017939	-	99	57.319	ENSHCOG00000004764	rad54b	98	56.258	Hippocampus_comes
ENSCANG00000017939	-	99	57.923	ENSIPUG00000018531	rad54b	99	52.604	Ictalurus_punctatus
ENSCANG00000017939	-	99	88.056	ENSSTOG00000010791	-	99	84.547	Ictidomys_tridecemlineatus
ENSCANG00000017939	-	99	86.030	ENSJJAG00000010314	Rad54b	99	82.048	Jaculus_jaculus
ENSCANG00000017939	-	99	56.593	ENSKMAG00000004744	rad54b	99	52.626	Kryptolebias_marmoratus
ENSCANG00000017939	-	99	69.945	ENSLACG00000000859	-	100	70.187	Latimeria_chalumnae
ENSCANG00000017939	-	99	63.912	ENSLOCG00000010100	rad54b	97	62.515	Lepisosteus_oculatus
ENSCANG00000017939	-	100	88.567	ENSLAFG00000015315	-	100	85.272	Loxodonta_africana
ENSCANG00000017939	-	100	99.033	ENSMFAG00000031629	-	100	99.033	Macaca_fascicularis
ENSCANG00000017939	-	100	99.033	ENSMMUG00000005659	-	100	98.789	Macaca_mulatta
ENSCANG00000017939	-	100	99.033	ENSMNEG00000016408	-	100	98.678	Macaca_nemestrina
ENSCANG00000017939	-	100	99.448	ENSMLEG00000006946	-	100	99.009	Mandrillus_leucophaeus
ENSCANG00000017939	-	99	58.560	ENSMAMG00000012269	rad54b	99	55.217	Mastacembelus_armatus
ENSCANG00000017939	-	99	58.711	ENSMZEG00005005281	rad54b	95	59.292	Maylandia_zebra
ENSCANG00000017939	-	100	73.764	ENSMGAG00000012024	-	99	68.404	Meleagris_gallopavo
ENSCANG00000017939	-	99	84.647	ENSMAUG00000013586	Rad54b	99	80.176	Mesocricetus_auratus
ENSCANG00000017939	-	99	91.034	ENSMICG00000000754	-	99	84.818	Microcebus_murinus
ENSCANG00000017939	-	99	81.241	ENSMOCG00000020035	Rad54b	99	77.912	Microtus_ochrogaster
ENSCANG00000017939	-	99	57.967	ENSMMOG00000003394	rad54b	99	54.248	Mola_mola
ENSCANG00000017939	-	99	79.530	ENSMODG00000007343	-	99	77.500	Monodelphis_domestica
ENSCANG00000017939	-	89	59.098	ENSMALG00000001520	rad54b	99	59.098	Monopterus_albus
ENSCANG00000017939	-	99	83.287	MGP_CAROLIEiJ_G0025810	Rad54b	99	78.658	Mus_caroli
ENSCANG00000017939	-	99	82.988	ENSMUSG00000078773	Rad54b	99	78.304	Mus_musculus
ENSCANG00000017939	-	99	83.817	MGP_PahariEiJ_G0023933	Rad54b	99	78.855	Mus_pahari
ENSCANG00000017939	-	99	83.978	MGP_SPRETEiJ_G0026758	Rad54b	99	79.098	Mus_spretus
ENSCANG00000017939	-	99	88.828	ENSMPUG00000008878	-	99	87.886	Mustela_putorius_furo
ENSCANG00000017939	-	100	88.981	ENSMLUG00000008953	-	100	84.759	Myotis_lucifugus
ENSCANG00000017939	-	99	87.517	ENSNGAG00000017537	Rad54b	99	83.479	Nannospalax_galili
ENSCANG00000017939	-	99	58.791	ENSNBRG00000013394	rad54b	99	54.326	Neolamprologus_brichardi
ENSCANG00000017939	-	100	97.796	ENSNLEG00000003062	-	99	97.796	Nomascus_leucogenys
ENSCANG00000017939	-	78	79.193	ENSMEUG00000012426	-	71	75.689	Notamacropus_eugenii
ENSCANG00000017939	-	99	86.722	ENSODEG00000019564	-	99	83.590	Octodon_degus
ENSCANG00000017939	-	93	88.035	ENSODEG00000002650	-	95	86.553	Octodon_degus
ENSCANG00000017939	-	99	58.767	ENSONIG00000006067	rad54b	99	55.038	Oreochromis_niloticus
ENSCANG00000017939	-	99	77.655	ENSOANG00000011348	-	99	77.497	Ornithorhynchus_anatinus
ENSCANG00000017939	-	99	90.069	ENSOCUG00000016478	-	99	85.495	Oryctolagus_cuniculus
ENSCANG00000017939	-	99	59.189	ENSORLG00000008918	rad54b	99	62.384	Oryzias_latipes
ENSCANG00000017939	-	89	62.539	ENSORLG00020012171	rad54b	99	62.539	Oryzias_latipes_hni
ENSCANG00000017939	-	99	59.324	ENSORLG00015018536	rad54b	99	54.382	Oryzias_latipes_hsok
ENSCANG00000017939	-	99	59.396	ENSOMEG00000004345	rad54b	99	59.638	Oryzias_melastigma
ENSCANG00000017939	-	99	89.517	ENSOGAG00000007854	-	99	86.813	Otolemur_garnettii
ENSCANG00000017939	-	99	87.983	ENSOARG00000007691	-	99	87.407	Ovis_aries
ENSCANG00000017939	-	100	95.868	ENSPPAG00000029572	-	100	95.495	Pan_paniscus
ENSCANG00000017939	-	99	90.331	ENSPPRG00000007571	-	99	90.331	Panthera_pardus
ENSCANG00000017939	-	99	90.331	ENSPTIG00000012670	-	99	90.331	Panthera_tigris_altaica
ENSCANG00000017939	-	100	98.072	ENSPTRG00000020427	-	100	98.072	Pan_troglodytes
ENSCANG00000017939	-	100	99.448	ENSPANG00000019566	-	100	99.119	Papio_anubis
ENSCANG00000017939	-	99	62.881	ENSPKIG00000014974	rad54b	99	58.279	Paramormyrops_kingsleyae
ENSCANG00000017939	-	100	73.626	ENSPSIG00000002383	-	99	72.917	Pelodiscus_sinensis
ENSCANG00000017939	-	99	84.254	ENSPEMG00000012133	Rad54b	99	80.418	Peromyscus_maniculatus_bairdii
ENSCANG00000017939	-	100	57.666	ENSPMAG00000002916	rad54b	99	58.302	Petromyzon_marinus
ENSCANG00000017939	-	100	79.890	ENSPCIG00000020151	-	94	77.805	Phascolarctos_cinereus
ENSCANG00000017939	-	99	60.300	ENSPFOG00000023411	rad54b	99	55.059	Poecilia_formosa
ENSCANG00000017939	-	99	60.300	ENSPLAG00000010430	rad54b	99	55.059	Poecilia_latipinna
ENSCANG00000017939	-	99	60.300	ENSPMEG00000016873	rad54b	95	59.360	Poecilia_mexicana
ENSCANG00000017939	-	99	60.055	ENSPREG00000018443	rad54b	99	55.277	Poecilia_reticulata
ENSCANG00000017939	-	100	97.658	ENSPPYG00000018750	-	100	97.143	Pongo_abelii
ENSCANG00000017939	-	99	91.172	ENSPCOG00000026845	-	99	91.172	Propithecus_coquereli
ENSCANG00000017939	-	99	89.931	ENSPVAG00000000261	-	92	89.879	Pteropus_vampyrus
ENSCANG00000017939	-	99	58.264	ENSPNYG00000018303	rad54b	96	58.883	Pundamilia_nyererei
ENSCANG00000017939	-	100	57.981	ENSPNAG00000000295	rad54b	99	54.252	Pygocentrus_nattereri
ENSCANG00000017939	-	99	81.354	ENSRNOG00000039949	Rad54b	99	76.322	Rattus_norvegicus
ENSCANG00000017939	-	100	99.119	ENSRBIG00000020419	-	100	99.119	Rhinopithecus_bieti
ENSCANG00000017939	-	100	99.119	ENSRROG00000039897	-	100	99.119	Rhinopithecus_roxellana
ENSCANG00000017939	-	77	43.234	YBR073W	RDH54	82	37.454	Saccharomyces_cerevisiae
ENSCANG00000017939	-	100	95.310	ENSSBOG00000028501	-	100	94.286	Saimiri_boliviensis_boliviensis
ENSCANG00000017939	-	99	80.360	ENSSHAG00000017038	-	99	74.753	Sarcophilus_harrisii
ENSCANG00000017939	-	79	65.202	ENSSFOG00015008483	rad54b	88	65.202	Scleropages_formosus
ENSCANG00000017939	-	99	58.459	ENSSMAG00000018659	rad54b	99	54.083	Scophthalmus_maximus
ENSCANG00000017939	-	98	59.557	ENSSDUG00000001122	rad54b	98	54.516	Seriola_dumerili
ENSCANG00000017939	-	99	59.642	ENSSLDG00000013787	rad54b	99	54.488	Seriola_lalandi_dorsalis
ENSCANG00000017939	-	100	73.764	ENSSPUG00000016497	-	99	68.381	Sphenodon_punctatus
ENSCANG00000017939	-	99	59.153	ENSSPAG00000012800	rad54b	99	55.568	Stegastes_partitus
ENSCANG00000017939	-	100	88.552	ENSSSCG00000006101	-	99	88.611	Sus_scrofa
ENSCANG00000017939	-	99	74.345	ENSTGUG00000011880	-	99	68.074	Taeniopygia_guttata
ENSCANG00000017939	-	99	59.041	ENSTRUG00000010015	rad54b	84	59.269	Takifugu_rubripes
ENSCANG00000017939	-	99	84.786	ENSTTRG00000006312	-	99	83.921	Tursiops_truncatus
ENSCANG00000017939	-	99	90.345	ENSUMAG00000016401	-	99	87.143	Ursus_maritimus
ENSCANG00000017939	-	99	88.935	ENSVPAG00000003157	-	99	84.785	Vicugna_pacos
ENSCANG00000017939	-	99	58.735	ENSXETG00000025924	rad54b	99	59.750	Xenopus_tropicalis
ENSCANG00000017939	-	99	58.904	ENSXMAG00000013141	rad54b	99	54.923	Xiphophorus_maculatus