EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCANG00000019461 (Gene tree)
Gene ID: 105512767
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Colobus_angolensis_palliatus
Status: putative
Strand: Plus strand
Length: 9130 bases
Position: chrKN980707.1:2302307-2311436
Accession: 105512767
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCANP00000005758	LSM	PF01423.22	9.6e-20	1	1
ENSCANP00000005776	LSM	PF01423.22	1e-19	1	1
ENSCANP00000005789	LSM	PF01423.22	4.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCANT00000021901	SNRPB-202	1014	XM_011943355	ENSCANP00000005776	240 (aa)	XP_011798745	A0A2K5HN80
ENSCANT00000021864	SNRPB-201	960	XM_011943357	ENSCANP00000005758	231 (aa)	XP_011798747	A0A2K5HN35
ENSCANT00000021928	SNRPB-203	249	-	ENSCANP00000005789	82 (aa)	-	A0A2K5HN72

Gene Model

Click here to download ENSCANG00000019461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCANG00000019461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCANG00000019461	SNRPB	96	92.760	ENSCANG00000041156	SNRPN	92	92.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCANG00000019461	SNRPB	100	100.000	ENSG00000125835	SNRPB	100	100.000	Homo_sapiens
ENSCANG00000019461	SNRPB	78	92.818	ENSAPOG00000019606	snrpb	56	94.643	Acanthochromis_polyacanthus
ENSCANG00000019461	SNRPB	99	100.000	ENSAMEG00000011353	SNRPB	98	100.000	Ailuropoda_melanoleuca
ENSCANG00000019461	SNRPB	76	92.571	ENSACIG00000014480	snrpb	71	94.444	Amphilophus_citrinellus
ENSCANG00000019461	SNRPB	78	92.818	ENSAOCG00000006876	snrpb	69	94.643	Amphiprion_ocellaris
ENSCANG00000019461	SNRPB	54	93.182	ENSAPEG00000008846	-	88	77.586	Amphiprion_percula
ENSCANG00000019461	SNRPB	78	92.818	ENSAPEG00000021585	snrpb	71	94.643	Amphiprion_percula
ENSCANG00000019461	SNRPB	78	92.265	ENSATEG00000009836	snrpb	69	94.048	Anabas_testudineus
ENSCANG00000019461	SNRPB	92	95.305	ENSACAG00000002053	SNRPB	92	95.305	Anolis_carolinensis
ENSCANG00000019461	SNRPB	99	93.043	ENSANAG00000036271	-	76	93.122	Aotus_nancymaae
ENSCANG00000019461	SNRPB	100	100.000	ENSANAG00000024443	-	100	100.000	Aotus_nancymaae
ENSCANG00000019461	SNRPB	78	92.818	ENSACLG00000014707	snrpb	69	94.643	Astatotilapia_calliptera
ENSCANG00000019461	SNRPB	76	92.896	ENSAMXG00000029434	snrpb	70	94.048	Astyanax_mexicanus
ENSCANG00000019461	SNRPB	100	99.567	ENSBTAG00000001038	SNRPB	100	99.567	Bos_taurus
ENSCANG00000019461	SNRPB	62	76.471	ENSBTAG00000024548	-	74	74.545	Bos_taurus
ENSCANG00000019461	SNRPB	93	92.056	ENSCJAG00000023097	-	79	92.063	Callithrix_jacchus
ENSCANG00000019461	SNRPB	71	84.483	ENSCJAG00000041673	-	71	94.545	Callithrix_jacchus
ENSCANG00000019461	SNRPB	100	100.000	ENSCJAG00000020971	-	100	100.000	Callithrix_jacchus
ENSCANG00000019461	SNRPB	100	100.000	ENSCAFG00000006693	-	100	100.000	Canis_familiaris
ENSCANG00000019461	SNRPB	81	88.421	ENSCAFG00000031109	-	79	84.737	Canis_familiaris
ENSCANG00000019461	SNRPB	100	100.000	ENSCAFG00020016981	-	100	100.000	Canis_lupus_dingo
ENSCANG00000019461	SNRPB	55	97.778	ENSCAFG00020013247	-	69	87.931	Canis_lupus_dingo
ENSCANG00000019461	SNRPB	56	95.652	ENSCAFG00020020370	-	61	97.826	Canis_lupus_dingo
ENSCANG00000019461	SNRPB	100	81.707	ENSCAFG00020003638	-	100	81.707	Canis_lupus_dingo
ENSCANG00000019461	SNRPB	100	99.567	ENSCHIG00000025449	-	100	99.567	Capra_hircus
ENSCANG00000019461	SNRPB	61	74.000	ENSCHIG00000024610	-	76	74.510	Capra_hircus
ENSCANG00000019461	SNRPB	100	100.000	ENSTSYG00000014498	-	100	100.000	Carlito_syrichta
ENSCANG00000019461	SNRPB	97	76.889	ENSTSYG00000032303	-	55	79.333	Carlito_syrichta
ENSCANG00000019461	SNRPB	99	100.000	ENSCAPG00000012669	SNRPB	100	100.000	Cavia_aperea
ENSCANG00000019461	SNRPB	100	100.000	ENSCPOG00000039408	SNRPB	100	100.000	Cavia_porcellus
ENSCANG00000019461	SNRPB	62	86.275	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSCANG00000019461	SNRPB	100	100.000	ENSCCAG00000026002	SNRPB	100	100.000	Cebus_capucinus
ENSCANG00000019461	SNRPB	100	100.000	ENSCATG00000030230	SNRPB	100	100.000	Cercocebus_atys
ENSCANG00000019461	SNRPB	100	98.750	ENSCLAG00000012442	SNRPB	100	98.750	Chinchilla_lanigera
ENSCANG00000019461	SNRPB	100	100.000	ENSCSAG00000010840	SNRPB	100	100.000	Chlorocebus_sabaeus
ENSCANG00000019461	SNRPB	100	96.667	ENSCPBG00000026801	SNRPB	100	96.667	Chrysemys_picta_bellii
ENSCANG00000019461	SNRPB	100	100.000	ENSCGRG00001023046	Snrpb	100	100.000	Cricetulus_griseus_chok1gshd
ENSCANG00000019461	SNRPB	96	100.000	ENSCGRG00000010423	Snrpb	98	100.000	Cricetulus_griseus_crigri
ENSCANG00000019461	SNRPB	79	92.896	ENSCSEG00000020328	snrpb	70	94.643	Cynoglossus_semilaevis
ENSCANG00000019461	SNRPB	73	92.857	ENSDARG00000011125	snrpb	69	94.643	Danio_rerio
ENSCANG00000019461	SNRPB	100	100.000	ENSDNOG00000015545	-	100	100.000	Dasypus_novemcinctus
ENSCANG00000019461	SNRPB	75	94.220	ENSDNOG00000007896	-	71	94.220	Dasypus_novemcinctus
ENSCANG00000019461	SNRPB	97	99.552	ENSDORG00000029558	Snrpb	100	99.565	Dipodomys_ordii
ENSCANG00000019461	SNRPB	65	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSCANG00000019461	SNRPB	63	98.077	ENSETEG00000006830	SNRPB	74	77.381	Echinops_telfairi
ENSCANG00000019461	SNRPB	78	80.108	ENSEBUG00000007467	SNRPB	62	88.591	Eptatretus_burgeri
ENSCANG00000019461	SNRPB	100	99.567	ENSEASG00005012991	SNRPB	100	99.567	Equus_asinus_asinus
ENSCANG00000019461	SNRPB	100	100.000	ENSECAG00000011944	SNRPB	100	100.000	Equus_caballus
ENSCANG00000019461	SNRPB	98	100.000	ENSEEUG00000015568	SNRPB	82	98.276	Erinaceus_europaeus
ENSCANG00000019461	SNRPB	63	96.154	ENSELUG00000014564	snrpb	71	93.210	Esox_lucius
ENSCANG00000019461	SNRPB	100	100.000	ENSFCAG00000034090	-	100	100.000	Felis_catus
ENSCANG00000019461	SNRPB	60	75.510	ENSFCAG00000041049	-	65	71.698	Felis_catus
ENSCANG00000019461	SNRPB	97	96.121	ENSFALG00000004866	SNRPB	100	96.121	Ficedula_albicollis
ENSCANG00000019461	SNRPB	100	100.000	ENSFDAG00000009937	SNRPB	100	100.000	Fukomys_damarensis
ENSCANG00000019461	SNRPB	100	96.250	ENSGALG00000035421	SNRPN	100	96.250	Gallus_gallus
ENSCANG00000019461	SNRPB	74	93.023	ENSGAFG00000019558	snrpb	72	94.012	Gambusia_affinis
ENSCANG00000019461	SNRPB	79	91.257	ENSGACG00000003262	snrpb	70	94.643	Gasterosteus_aculeatus
ENSCANG00000019461	SNRPB	100	96.667	ENSGAGG00000001308	SNRPB	100	96.667	Gopherus_agassizii
ENSCANG00000019461	SNRPB	100	100.000	ENSGGOG00000016138	SNRPB	100	100.000	Gorilla_gorilla
ENSCANG00000019461	SNRPB	78	92.818	ENSHBUG00000008369	snrpb	69	94.643	Haplochromis_burtoni
ENSCANG00000019461	SNRPB	100	100.000	ENSHGLG00000016241	-	100	100.000	Heterocephalus_glaber_female
ENSCANG00000019461	SNRPB	65	90.000	ENSHGLG00000016505	-	72	90.000	Heterocephalus_glaber_female
ENSCANG00000019461	SNRPB	100	100.000	ENSHGLG00100012877	-	100	100.000	Heterocephalus_glaber_male
ENSCANG00000019461	SNRPB	65	90.000	ENSHGLG00100004178	-	72	90.000	Heterocephalus_glaber_male
ENSCANG00000019461	SNRPB	79	92.350	ENSHCOG00000014888	snrpb	70	94.643	Hippocampus_comes
ENSCANG00000019461	SNRPB	73	92.857	ENSIPUG00000024569	SNRPB	70	94.643	Ictalurus_punctatus
ENSCANG00000019461	SNRPB	100	98.333	ENSSTOG00000033664	-	100	98.333	Ictidomys_tridecemlineatus
ENSCANG00000019461	SNRPB	94	81.944	ENSSTOG00000027821	-	62	99.265	Ictidomys_tridecemlineatus
ENSCANG00000019461	SNRPB	100	100.000	ENSJJAG00000024170	Snrpb	100	100.000	Jaculus_jaculus
ENSCANG00000019461	SNRPB	75	94.220	ENSKMAG00000014494	snrpb	68	95.238	Kryptolebias_marmoratus
ENSCANG00000019461	SNRPB	79	92.350	ENSLBEG00000005678	snrpb	70	94.643	Labrus_bergylta
ENSCANG00000019461	SNRPB	96	93.213	ENSLACG00000011459	SNRPB	92	93.213	Latimeria_chalumnae
ENSCANG00000019461	SNRPB	73	94.048	ENSLOCG00000002687	snrpb	70	95.238	Lepisosteus_oculatus
ENSCANG00000019461	SNRPB	99	96.053	ENSLAFG00000017588	SNRPB	99	96.053	Loxodonta_africana
ENSCANG00000019461	SNRPB	100	100.000	ENSMFAG00000038756	SNRPB	100	100.000	Macaca_fascicularis
ENSCANG00000019461	SNRPB	100	100.000	ENSMMUG00000010050	SNRPB	100	100.000	Macaca_mulatta
ENSCANG00000019461	SNRPB	100	100.000	ENSMNEG00000027954	SNRPB	100	100.000	Macaca_nemestrina
ENSCANG00000019461	SNRPB	100	100.000	ENSMLEG00000022346	SNRPB	100	100.000	Mandrillus_leucophaeus
ENSCANG00000019461	SNRPB	78	92.778	ENSMAMG00000009294	snrpb	67	94.611	Mastacembelus_armatus
ENSCANG00000019461	SNRPB	78	92.818	ENSMZEG00005011856	snrpb	69	94.643	Maylandia_zebra
ENSCANG00000019461	SNRPB	95	97.436	ENSMAUG00000020656	-	100	97.436	Mesocricetus_auratus
ENSCANG00000019461	SNRPB	73	88.333	ENSMAUG00000006516	-	92	88.333	Mesocricetus_auratus
ENSCANG00000019461	SNRPB	97	85.333	ENSMICG00000015983	-	87	89.947	Microcebus_murinus
ENSCANG00000019461	SNRPB	100	99.567	ENSMICG00000016519	SNRPB	100	99.567	Microcebus_murinus
ENSCANG00000019461	SNRPB	100	99.567	ENSMOCG00000002892	-	100	99.567	Microtus_ochrogaster
ENSCANG00000019461	SNRPB	63	90.385	ENSMOCG00000021362	-	72	73.410	Microtus_ochrogaster
ENSCANG00000019461	SNRPB	79	92.857	ENSMMOG00000013226	snrpb	71	94.611	Mola_mola
ENSCANG00000019461	SNRPB	78	92.265	ENSMALG00000020839	snrpb	56	94.048	Monopterus_albus
ENSCANG00000019461	SNRPB	100	99.567	MGP_CAROLIEiJ_G0024293	Snrpb	100	99.567	Mus_caroli
ENSCANG00000019461	SNRPB	100	99.567	ENSMUSG00000027404	Snrpb	100	99.567	Mus_musculus
ENSCANG00000019461	SNRPB	100	99.567	MGP_PahariEiJ_G0025738	Snrpb	100	99.567	Mus_pahari
ENSCANG00000019461	SNRPB	100	99.567	MGP_SPRETEiJ_G0025213	Snrpb	100	99.567	Mus_spretus
ENSCANG00000019461	SNRPB	100	100.000	ENSMPUG00000009283	SNRPB	100	100.000	Mustela_putorius_furo
ENSCANG00000019461	SNRPB	100	96.667	ENSMLUG00000016951	SNRPB	100	96.667	Myotis_lucifugus
ENSCANG00000019461	SNRPB	100	100.000	ENSNGAG00000012051	Snrpb	100	100.000	Nannospalax_galili
ENSCANG00000019461	SNRPB	78	90.055	ENSNBRG00000006353	snrpb	62	93.293	Neolamprologus_brichardi
ENSCANG00000019461	SNRPB	100	100.000	ENSNLEG00000029067	SNRPB	100	100.000	Nomascus_leucogenys
ENSCANG00000019461	SNRPB	97	97.333	ENSMEUG00000015625	SNRPB	100	97.333	Notamacropus_eugenii
ENSCANG00000019461	SNRPB	100	95.417	ENSODEG00000016060	-	100	95.417	Octodon_degus
ENSCANG00000019461	SNRPB	100	100.000	ENSODEG00000004305	-	100	100.000	Octodon_degus
ENSCANG00000019461	SNRPB	78	92.818	ENSONIG00000000248	snrpb	69	94.643	Oreochromis_niloticus
ENSCANG00000019461	SNRPB	77	93.296	ENSOCUG00000022423	-	86	96.429	Oryctolagus_cuniculus
ENSCANG00000019461	SNRPB	100	97.083	ENSOCUG00000028215	-	100	97.083	Oryctolagus_cuniculus
ENSCANG00000019461	SNRPB	92	71.831	ENSOCUG00000026813	-	63	70.946	Oryctolagus_cuniculus
ENSCANG00000019461	SNRPB	93	94.884	ENSOCUG00000021456	-	78	95.767	Oryctolagus_cuniculus
ENSCANG00000019461	SNRPB	100	99.583	ENSOCUG00000014042	-	100	99.583	Oryctolagus_cuniculus
ENSCANG00000019461	SNRPB	78	92.265	ENSORLG00000021862	snrpb	69	94.643	Oryzias_latipes
ENSCANG00000019461	SNRPB	100	100.000	ENSOGAG00000016149	SNRPB	100	100.000	Otolemur_garnettii
ENSCANG00000019461	SNRPB	100	99.567	ENSOARG00000006740	SNRPB	100	99.567	Ovis_aries
ENSCANG00000019461	SNRPB	100	100.000	ENSPPAG00000036314	SNRPB	100	100.000	Pan_paniscus
ENSCANG00000019461	SNRPB	87	61.972	ENSPPRG00000024804	-	86	70.492	Panthera_pardus
ENSCANG00000019461	SNRPB	100	100.000	ENSPPRG00000003233	-	100	100.000	Panthera_pardus
ENSCANG00000019461	SNRPB	61	78.000	ENSPPRG00000018908	-	70	77.419	Panthera_pardus
ENSCANG00000019461	SNRPB	99	100.000	ENSPTIG00000007468	SNRPB	99	100.000	Panthera_tigris_altaica
ENSCANG00000019461	SNRPB	100	100.000	ENSPTRG00000013176	SNRPB	100	100.000	Pan_troglodytes
ENSCANG00000019461	SNRPB	100	100.000	ENSPANG00000020362	SNRPB	100	100.000	Papio_anubis
ENSCANG00000019461	SNRPB	73	92.262	ENSPKIG00000002865	snrpb	70	94.048	Paramormyrops_kingsleyae
ENSCANG00000019461	SNRPB	99	96.653	ENSPSIG00000014125	SNRPB	98	96.653	Pelodiscus_sinensis
ENSCANG00000019461	SNRPB	77	90.449	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSCANG00000019461	SNRPB	100	100.000	ENSPEMG00000007948	Snrpb	100	100.000	Peromyscus_maniculatus_bairdii
ENSCANG00000019461	SNRPB	80	78.788	ENSPMAG00000004923	SNRPB	100	93.258	Petromyzon_marinus
ENSCANG00000019461	SNRPB	99	97.908	ENSPCIG00000004694	SNRPB	99	97.908	Phascolarctos_cinereus
ENSCANG00000019461	SNRPB	65	94.340	ENSPFOG00000011802	snrpb	63	95.973	Poecilia_formosa
ENSCANG00000019461	SNRPB	57	95.745	ENSPLAG00000014130	snrpb	59	95.556	Poecilia_latipinna
ENSCANG00000019461	SNRPB	82	76.842	ENSPREG00000015515	snrpb	62	95.556	Poecilia_reticulata
ENSCANG00000019461	SNRPB	100	100.000	ENSPPYG00000010841	SNRPB	100	100.000	Pongo_abelii
ENSCANG00000019461	SNRPB	100	100.000	ENSPCOG00000013686	SNRPB	100	100.000	Propithecus_coquereli
ENSCANG00000019461	SNRPB	98	98.678	ENSPVAG00000017013	SNRPB	80	98.678	Pteropus_vampyrus
ENSCANG00000019461	SNRPB	78	92.818	ENSPNYG00000014788	snrpb	69	94.643	Pundamilia_nyererei
ENSCANG00000019461	SNRPB	77	93.220	ENSPNAG00000016126	snrpb	70	94.643	Pygocentrus_nattereri
ENSCANG00000019461	SNRPB	100	100.000	ENSRNOG00000006961	Snrpb	100	100.000	Rattus_norvegicus
ENSCANG00000019461	SNRPB	100	99.583	ENSRBIG00000040505	SNRPB	100	99.583	Rhinopithecus_bieti
ENSCANG00000019461	SNRPB	100	100.000	ENSRROG00000036094	SNRPB	100	100.000	Rhinopithecus_roxellana
ENSCANG00000019461	SNRPB	100	100.000	ENSSBOG00000027310	SNRPB	100	100.000	Saimiri_boliviensis_boliviensis
ENSCANG00000019461	SNRPB	100	98.333	ENSSHAG00000010394	SNRPB	100	98.333	Sarcophilus_harrisii
ENSCANG00000019461	SNRPB	73	92.262	ENSSFOG00015002870	snrpb	70	93.452	Scleropages_formosus
ENSCANG00000019461	SNRPB	79	91.803	ENSSMAG00000006766	snrpb	70	94.048	Scophthalmus_maximus
ENSCANG00000019461	SNRPB	78	92.818	ENSSDUG00000018539	snrpb	69	94.643	Seriola_dumerili
ENSCANG00000019461	SNRPB	78	92.818	ENSSLDG00000022391	snrpb	69	94.643	Seriola_lalandi_dorsalis
ENSCANG00000019461	SNRPB	63	98.077	ENSSARG00000003084	SNRPB	74	84.884	Sorex_araneus
ENSCANG00000019461	SNRPB	99	96.653	ENSSPUG00000015659	SNRPB	100	96.653	Sphenodon_punctatus
ENSCANG00000019461	SNRPB	78	92.818	ENSSPAG00000021992	snrpb	69	94.643	Stegastes_partitus
ENSCANG00000019461	SNRPB	100	80.087	ENSSSCG00000011966	-	91	75.943	Sus_scrofa
ENSCANG00000019461	SNRPB	100	99.567	ENSSSCG00000040857	-	100	99.567	Sus_scrofa
ENSCANG00000019461	SNRPB	63	96.154	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSCANG00000019461	SNRPB	79	91.803	ENSTRUG00000023094	snrpb	72	94.048	Takifugu_rubripes
ENSCANG00000019461	SNRPB	79	91.803	ENSTNIG00000002991	snrpb	70	94.048	Tetraodon_nigroviridis
ENSCANG00000019461	SNRPB	62	74.510	ENSUAMG00000016301	-	70	75.000	Ursus_americanus
ENSCANG00000019461	SNRPB	75	100.000	ENSUAMG00000005984	-	83	100.000	Ursus_americanus
ENSCANG00000019461	SNRPB	62	74.510	ENSUMAG00000011571	-	63	75.000	Ursus_maritimus
ENSCANG00000019461	SNRPB	59	99.270	ENSUMAG00000002123	-	64	97.842	Ursus_maritimus
ENSCANG00000019461	SNRPB	61	100.000	ENSVVUG00000018297	-	52	43.713	Vulpes_vulpes
ENSCANG00000019461	SNRPB	97	79.736	ENSVVUG00000010086	-	85	81.122	Vulpes_vulpes
ENSCANG00000019461	SNRPB	100	99.583	ENSVVUG00000025654	-	100	99.583	Vulpes_vulpes
ENSCANG00000019461	SNRPB	94	66.234	ENSVVUG00000011423	-	73	89.286	Vulpes_vulpes
ENSCANG00000019461	SNRPB	92	95.475	ENSXETG00000027266	snrpb	93	95.475	Xenopus_tropicalis
ENSCANG00000019461	SNRPB	93	65.022	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus